RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 PHF5AQ7RTV0 110 aaKnown RBP4.02□□□□□ -1.77
IRF9-208ENST00000560311 Q8IZM0 81 aa4.02□□□□□ -1.77
IRF9-208ENST00000560311 GAGE2DQ9UEU5 116 aa4.02□□□□□ -1.77
IRF9-208ENST00000560311 CDKN2A-AS1Q9UH64 79 aa4.02□□□□□ -1.77
IRF9-208ENST00000560311 IGLV5-45A0A087WSX0 123 aa4.01□□□□□ -1.77
IRF9-208ENST00000560311 A0A096LNJ9 63 aa4.01□□□□□ -1.77
IRF9-208ENST00000560311 TINCRA0A1B0GVN0 87 aa4.01□□□□□ -1.77
IRF9-208ENST00000560311 SMIM1B2RUZ4 78 aa4.01□□□□□ -1.77
IRF9-208ENST00000560311 TRIAP1O43715 76 aa4.01□□□□□ -1.77
IRF9-208ENST00000560311 CKS1BP61024 79 aa4.01□□□□□ -1.77
IRF9-208ENST00000560311 C18orf32Q8TCD1 76 aa4.01□□□□□ -1.77
IRF9-208ENST00000560311 PSORS1C2Q9UIG4 136 aa4.01□□□□□ -1.77
IRF9-208ENST00000560311 TRAPPC1Q9Y5R8 145 aa4.01□□□□□ -1.77
IRF9-208ENST00000560311 F8VRH5 84 aa4□□□□□ -1.77
IRF9-208ENST00000560311 HBDP02042 147 aa4□□□□□ -1.77
IRF9-208ENST00000560311 SPINK8P0C7L1 97 aa4□□□□□ -1.77
IRF9-208ENST00000560311 CXCL5P42830 114 aa4□□□□□ -1.77
IRF9-208ENST00000560311 PMVKQ15126 192 aa4□□□□□ -1.77
IRF9-208ENST00000560311 PMCHL1Q16048 86 aa4□□□□□ -1.77
IRF9-208ENST00000560311 C1orf137Q5JT78 98 aa4□□□□□ -1.77
IRF9-208ENST00000560311 C9orf129Q5T035 196 aaKnown RBP4□□□□□ -1.77
IRF9-208ENST00000560311 SPINK6Q6UWN8 80 aa4□□□□□ -1.77
IRF9-208ENST00000560311 KRTAP7-1Q8IUC3 87 aa4□□□□□ -1.77
IRF9-208ENST00000560311 URB1-AS1Q96HZ7 61 aa4□□□□□ -1.77
IRF9-208ENST00000560311 CST9LQ9H4G1 147 aa4□□□□□ -1.77
IRF9-208ENST00000560311 TSPAN13O95857 204 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 IGLC3P0DOY3 106 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 AKR1D1P51857 326 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 UBE2BP63146 152 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 PDZD11Q5EBL8 140 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 SERTAD4-AS1Q5TG53 156 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 REG3GQ6UW15 175 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 KRTAP11-1Q8IUC1 163 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 MTURNQ8N3F0 131 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 Q8N9P0 234 aaPredicted RBP3.99□□□□□ -1.77
IRF9-208ENST00000560311 COX7B2Q8TF08 81 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 YPEL4Q96NS1 127 aa3.99□□□□□ -1.77
IRF9-208ENST00000560311 H3BRM9 83 aa3.98□□□□□ -1.77
IRF9-208ENST00000560311 SRSF9Q13242 221 aaKnown RBP eCLIP3.98□□□□□ -1.77
IRF9-208ENST00000560311 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
IRF9-208ENST00000560311 CBLN2Q8IUK8 224 aa3.98□□□□□ -1.77
IRF9-208ENST00000560311 LINC01600Q96MT4 127 aa3.98□□□□□ -1.77
IRF9-208ENST00000560311 XAGE1AQ9HD64 81 aa3.98□□□□□ -1.77
IRF9-208ENST00000560311 TSTD3H0UI37 97 aa3.97□□□□□ -1.77
IRF9-208ENST00000560311 IGLV7-43P04211 117 aa3.97□□□□□ -1.77
IRF9-208ENST00000560311 ZNF22P17026 224 aaPredicted RBP3.97□□□□□ -1.77
IRF9-208ENST00000560311 NDUFA6P56556 154 aa3.97□□□□□ -1.77
IRF9-208ENST00000560311 RAB5BP61020 215 aa3.97□□□□□ -1.77
IRF9-208ENST00000560311 IGLV5-39A0A0G2JS06 123 aa3.96□□□□□ -1.78
IRF9-208ENST00000560311 ATP5LO75964 103 aa3.96□□□□□ -1.78
IRF9-208ENST00000560311 VPREB1P12018 145 aa3.96□□□□□ -1.78
IRF9-208ENST00000560311 LRP2P98164 4655 aa3.96□□□□□ -1.78
IRF9-208ENST00000560311 C11orf86A6NJI1 115 aa3.95□□□□□ -1.78
IRF9-208ENST00000560311 H0Y9J4 135 aa3.95□□□□□ -1.78
IRF9-208ENST00000560311 DIRC1Q969H9 104 aa3.95□□□□□ -1.78
IRF9-208ENST00000560311 CHCHD1Q96BP2 118 aaKnown RBP3.95□□□□□ -1.78
IRF9-208ENST00000560311 C22orf24Q9Y442 160 aa3.95□□□□□ -1.78
IRF9-208ENST00000560311 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
IRF9-208ENST00000560311 NUPR1O60356 82 aa3.94□□□□□ -1.78
IRF9-208ENST00000560311 TMEM170BQ5T4T1 132 aa3.94□□□□□ -1.78
IRF9-208ENST00000560311 MRPL55Q7Z7F7 128 aaKnown RBP3.94□□□□□ -1.78
IRF9-208ENST00000560311 BAGE3Q86Y29 109 aa3.94□□□□□ -1.78
IRF9-208ENST00000560311 TP73-AS1Q9UF72 201 aa3.94□□□□□ -1.78
IRF9-208ENST00000560311 V9GYY9 64 aa3.94□□□□□ -1.78
IRF9-208ENST00000560311 TRAV12-1A0A0B4J245 112 aa3.93□□□□□ -1.78
IRF9-208ENST00000560311 HSBP1O75506 76 aa3.93□□□□□ -1.78
IRF9-208ENST00000560311 PFN2P35080 140 aa3.93□□□□□ -1.78
IRF9-208ENST00000560311 KRTAP10-8P60410 259 aa3.93□□□□□ -1.78
IRF9-208ENST00000560311 IFI27L1Q96BM0 104 aa3.93□□□□□ -1.78
IRF9-208ENST00000560311 ERG28Q9UKR5 140 aa3.93□□□□□ -1.78
IRF9-208ENST00000560311 LPAP08519 4548 aa3.93□□□□□ -1.78
IRF9-208ENST00000560311 IGLV5-37A0A075B6J1 123 aa3.92□□□□□ -1.78
IRF9-208ENST00000560311 BCE1O60756 84 aa3.92□□□□□ -1.78
IRF9-208ENST00000560311 SERF1AO75920 110 aa3.92□□□□□ -1.78
IRF9-208ENST00000560311 TRGC2P03986 189 aa3.92□□□□□ -1.78
IRF9-208ENST00000560311 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
IRF9-208ENST00000560311 SFTA2Q6UW10 78 aa3.92□□□□□ -1.78
IRF9-208ENST00000560311 NKAPP1Q8N9T2 125 aa3.92□□□□□ -1.78
IRF9-208ENST00000560311 ZNF625Q96I27 306 aaPredicted RBP3.92□□□□□ -1.78
IRF9-208ENST00000560311 VPS25Q9BRG1 176 aa3.92□□□□□ -1.78
IRF9-208ENST00000560311 TMEM223A0PJW6 202 aa3.91□□□□□ -1.78
IRF9-208ENST00000560311 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
IRF9-208ENST00000560311 ZNF861PO60384 105 aa3.91□□□□□ -1.78
IRF9-208ENST00000560311 SCO1O75880 301 aa3.91□□□□□ -1.78
IRF9-208ENST00000560311 FAM19A2Q8N3H0 131 aa3.91□□□□□ -1.78
IRF9-208ENST00000560311 PRR26Q8N8Z3 221 aa3.91□□□□□ -1.78
IRF9-208ENST00000560311 LINC00167Q96N53 147 aa3.91□□□□□ -1.78
IRF9-208ENST00000560311 SND1-IT1Q9HBX3 110 aa3.91□□□□□ -1.78
IRF9-208ENST00000560311 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.79
IRF9-208ENST00000560311 IGKV2-28A0A075B6P5 120 aa3.9□□□□□ -1.79
IRF9-208ENST00000560311 IGKV2D-28P01615 120 aa3.9□□□□□ -1.79
IRF9-208ENST00000560311 DDTP30046 118 aa3.9□□□□□ -1.79
IRF9-208ENST00000560311 RPL28P46779 137 aaKnown RBP3.9□□□□□ -1.79
IRF9-208ENST00000560311 COX17Q14061 63 aa3.9□□□□□ -1.79
IRF9-208ENST00000560311 Q8NDZ9 215 aa3.9□□□□□ -1.79
IRF9-208ENST00000560311 COLCA2A8K830 154 aa3.89□□□□□ -1.79
IRF9-208ENST00000560311 LEPROTL1O95214 131 aa3.89□□□□□ -1.79
IRF9-208ENST00000560311 SMIM20Q8N5G0 67 aa3.89□□□□□ -1.79
IRF9-208ENST00000560311 PLNP26678 52 aa3.88□□□□□ -1.79
IRF9-208ENST00000560311 RPL13AP40429 203 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms