RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 K7EMI3 77 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 TSPAN13O95857 204 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 G0S2P27469 103 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 PRR4Q16378 134 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 CLLU1Q5K131 121 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 FA2HQ7L5A8 372 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 COX7B2Q8TF08 81 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 TIMM17AQ99595 171 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 SMCO4Q9NRQ5 59 aa4.39□□□□□ -1.71
SPG11-213ENST00000558988 FAT3Q8TDW7 4589 aa4.38□□□□□ -1.71
SPG11-213ENST00000558988 IGLV1-50A0A075B6I6 118 aa4.38□□□□□ -1.71
SPG11-213ENST00000558988 TMEM218A2RU14 115 aa4.38□□□□□ -1.71
SPG11-213ENST00000558988 KRTAP1-4P0C5Y4 121 aa4.38□□□□□ -1.71
SPG11-213ENST00000558988 FABP9Q0Z7S8 132 aa4.38□□□□□ -1.71
SPG11-213ENST00000558988 ERASQ7Z444 233 aa4.38□□□□□ -1.71
SPG11-213ENST00000558988 MRPL55Q7Z7F7 128 aaKnown RBP4.38□□□□□ -1.71
SPG11-213ENST00000558988 COMMD7Q86VX2 200 aa4.38□□□□□ -1.71
SPG11-213ENST00000558988 TINCRA0A1B0GVN0 87 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 ZNF861PO60384 105 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 SCO1O75880 301 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 PFN2P35080 140 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 CXCL5P42830 114 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 PDZD11Q5EBL8 140 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 UQCC3Q6UW78 93 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 NKAPP1Q8N9T2 125 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 CST9LQ9H4G1 147 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 RPS10P5Q9NQ39 176 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 HMCN2Q8NDA2 5059 aa4.37□□□□□ -1.71
SPG11-213ENST00000558988 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 TRAV9-1A0A075B6T8 112 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 NUPR1O60356 82 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 ATP5LO75964 103 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 RPL13AP40429 203 aaKnown RBP4.36□□□□□ -1.71
SPG11-213ENST00000558988 RPL28P46779 137 aaKnown RBP4.36□□□□□ -1.71
SPG11-213ENST00000558988 UBE2AP49459 152 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 IFITM2Q01629 132 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 PMVKQ15126 192 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 PMCHL1Q16048 86 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 KRTAP13-3Q3SY46 172 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 FAM19A3Q7Z5A8 133 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 LINC00167Q96N53 147 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 ANAPC11Q9NYG5 84 aa4.36□□□□□ -1.71
SPG11-213ENST00000558988 IGKV2-28A0A075B6P5 120 aa4.35□□□□□ -1.71
SPG11-213ENST00000558988 H3BRM9 83 aa4.35□□□□□ -1.71
SPG11-213ENST00000558988 BCE1O60756 84 aa4.35□□□□□ -1.71
SPG11-213ENST00000558988 IGKV2D-28P01615 120 aa4.35□□□□□ -1.71
SPG11-213ENST00000558988 ZNF625Q96I27 306 aaPredicted RBP4.35□□□□□ -1.71
SPG11-213ENST00000558988 GNB1LQ9BYB4 327 aa4.35□□□□□ -1.71
SPG11-213ENST00000558988 IGLV5-45A0A087WSX0 123 aa4.34□□□□□ -1.71
SPG11-213ENST00000558988 H0Y8G0 127 aa4.34□□□□□ -1.71
SPG11-213ENST00000558988 HERV-K104P63124 156 aa4.34□□□□□ -1.71
SPG11-213ENST00000558988 TYMSOSQ8TAI1 123 aa4.34□□□□□ -1.71
SPG11-213ENST00000558988 SEC11CQ9BY50 192 aa4.34□□□□□ -1.71
SPG11-213ENST00000558988 A0A087X002 238 aa4.33□□□□□ -1.72
SPG11-213ENST00000558988 LINC01549A6NIU2 74 aa4.33□□□□□ -1.72
SPG11-213ENST00000558988 CRYGAP11844 174 aa4.33□□□□□ -1.72
SPG11-213ENST00000558988 PRLHP81277 87 aa4.33□□□□□ -1.72
SPG11-213ENST00000558988 COX19Q49B96 90 aa4.33□□□□□ -1.72
SPG11-213ENST00000558988 TP73-AS1Q9UF72 201 aa4.33□□□□□ -1.72
SPG11-213ENST00000558988 TRAPPC1Q9Y5R8 145 aa4.33□□□□□ -1.72
SPG11-213ENST00000558988 LINC01546A6NGU7 62 aa4.32□□□□□ -1.72
SPG11-213ENST00000558988 IGLC3P0DOY3 106 aa4.32□□□□□ -1.72
SPG11-213ENST00000558988 ZNF22P17026 224 aaPredicted RBP4.32□□□□□ -1.72
SPG11-213ENST00000558988 RHEBQ15382 184 aa4.32□□□□□ -1.72
SPG11-213ENST00000558988 TMEM170BQ5T4T1 132 aa4.32□□□□□ -1.72
SPG11-213ENST00000558988 FAM19A1Q7Z5A9 133 aa4.32□□□□□ -1.72
SPG11-213ENST00000558988 BAGE3Q86Y29 109 aa4.32□□□□□ -1.72
SPG11-213ENST00000558988 ERG28Q9UKR5 140 aa4.32□□□□□ -1.72
SPG11-213ENST00000558988 CARHSP1Q9Y2V2 147 aaKnown RBP4.32□□□□□ -1.72
SPG11-213ENST00000558988 A0A096LNJ9 63 aa4.31□□□□□ -1.72
SPG11-213ENST00000558988 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
SPG11-213ENST00000558988 HBDP02042 147 aa4.31□□□□□ -1.72
SPG11-213ENST00000558988 APOC3P02656 99 aa4.31□□□□□ -1.72
SPG11-213ENST00000558988 C18orf32Q8TCD1 76 aa4.31□□□□□ -1.72
SPG11-213ENST00000558988 RETNLBQ9BQ08 111 aa4.31□□□□□ -1.72
SPG11-213ENST00000558988 SND1-IT1Q9HBX3 110 aa4.31□□□□□ -1.72
SPG11-213ENST00000558988 C11orf86A6NJI1 115 aa4.3□□□□□ -1.72
SPG11-213ENST00000558988 LINC00614P0C842 121 aa4.3□□□□□ -1.72
SPG11-213ENST00000558988 LINC00158P58513 81 aa4.3□□□□□ -1.72
SPG11-213ENST00000558988 IGLV5-37A0A075B6J1 123 aa4.29□□□□□ -1.72
SPG11-213ENST00000558988 IGKV2D-26A0A0A0MRZ7 120 aa4.29□□□□□ -1.72
SPG11-213ENST00000558988 RPL24P83731 157 aaKnown RBP4.29□□□□□ -1.72
SPG11-213ENST00000558988 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
SPG11-213ENST00000558988 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
SPG11-213ENST00000558988 HIGD2AQ9BW72 106 aa4.29□□□□□ -1.72
SPG11-213ENST00000558988 TMEM126AQ9H061 195 aa4.29□□□□□ -1.72
SPG11-213ENST00000558988 CHTOPQ9Y3Y2 248 aaKnown RBP4.29□□□□□ -1.72
SPG11-213ENST00000558988 NDUFA5Q16718 116 aa4.28□□□□□ -1.72
SPG11-213ENST00000558988 C10orf91Q5T1B1 145 aa4.28□□□□□ -1.72
SPG11-213ENST00000558988 Q8NDZ9 215 aa4.28□□□□□ -1.72
SPG11-213ENST00000558988 LRP2P98164 4655 aa4.27□□□□□ -1.73
SPG11-213ENST00000558988 M0R378 163 aa4.27□□□□□ -1.73
SPG11-213ENST00000558988 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
SPG11-213ENST00000558988 KRTAP13-1Q8IUC0 172 aa4.27□□□□□ -1.73
SPG11-213ENST00000558988 LINC00304Q8N9R0 145 aa4.27□□□□□ -1.73
SPG11-213ENST00000558988 NCR3O14931 201 aa4.26□□□□□ -1.73
SPG11-213ENST00000558988 SNAPINO95295 136 aa4.26□□□□□ -1.73
SPG11-213ENST00000558988 SMIM13P0DJ93 91 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms