RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 HTTP42858 3142 aa1.31□□□□□ -2.2
TDP1-217ENST00000557782 FLNBO75369 2602 aaKnown RBP1.31□□□□□ -2.2
TDP1-217ENST00000557782 FAM223BA6NKX1 122 aa1.31□□□□□ -2.2
TDP1-217ENST00000557782 ZNF815PA8K554 130 aa1.31□□□□□ -2.2
TDP1-217ENST00000557782 LOC730098B7Z3J9 87 aa1.31□□□□□ -2.2
TDP1-217ENST00000557782 PIN1P1O15428 100 aa1.31□□□□□ -2.2
TDP1-217ENST00000557782 SMIM11AP58511 58 aa1.31□□□□□ -2.2
TDP1-217ENST00000557782 SNRPGP62308 76 aaKnown RBP1.31□□□□□ -2.2
TDP1-217ENST00000557782 SPINK9Q5DT21 86 aa1.31□□□□□ -2.2
TDP1-217ENST00000557782 PSMG4Q5JS54 123 aa1.31□□□□□ -2.2
TDP1-217ENST00000557782 S100A16Q96FQ6 103 aaKnown RBP1.31□□□□□ -2.2
TDP1-217ENST00000557782 RABAC1Q9UI14 185 aa1.31□□□□□ -2.2
TDP1-217ENST00000557782 CENPFP49454 3210 aa1.3□□□□□ -2.2
TDP1-217ENST00000557782 M0R3E3 92 aa1.3□□□□□ -2.2
TDP1-217ENST00000557782 BCE1O60756 84 aa1.3□□□□□ -2.2
TDP1-217ENST00000557782 CFDP00746 253 aaPredicted RBP1.3□□□□□ -2.2
TDP1-217ENST00000557782 CD52P31358 61 aa1.3□□□□□ -2.2
TDP1-217ENST00000557782 PEA15Q15121 130 aa1.3□□□□□ -2.2
TDP1-217ENST00000557782 PTPN13Q12923 2485 aa1.3□□□□□ -2.2
TDP1-217ENST00000557782 DOPEY1Q5JWR5 2465 aa1.3□□□□□ -2.2
TDP1-217ENST00000557782 USP24Q9UPU5 2620 aa1.3□□□□□ -2.2
TDP1-217ENST00000557782 NMBP08949 121 aa1.29□□□□□ -2.2
TDP1-217ENST00000557782 HMGA1P17096 107 aaKnown RBP1.29□□□□□ -2.2
TDP1-217ENST00000557782 PROK2Q9HC23 129 aa1.29□□□□□ -2.2
TDP1-217ENST00000557782 GOLGA4Q13439 2230 aaKnown RBP1.29□□□□□ -2.2
TDP1-217ENST00000557782 FAM208BQ5VWN6 2430 aa1.28□□□□□ -2.2
TDP1-217ENST00000557782 ABCA2Q9BZC7 2435 aa1.28□□□□□ -2.2
TDP1-217ENST00000557782 EPG5Q9HCE0 2579 aa1.28□□□□□ -2.2
TDP1-217ENST00000557782 CHD6Q8TD26 2715 aa1.28□□□□□ -2.2
TDP1-217ENST00000557782 CPSF4LA6NMK7 179 aaKnown RBP1.28□□□□□ -2.2
TDP1-217ENST00000557782 C10orf142B7Z368 130 aa1.28□□□□□ -2.2
TDP1-217ENST00000557782 TTTY10Q9BZA0 68 aa1.28□□□□□ -2.2
TDP1-217ENST00000557782 Q9Y3F1 56 aa1.28□□□□□ -2.2
TDP1-217ENST00000557782 MUC6Q6W4X9 2439 aa1.28□□□□□ -2.2
TDP1-217ENST00000557782 ANKRD17O75179 2603 aaKnown RBP1.28□□□□□ -2.2
TDP1-217ENST00000557782 TEP1Q99973 2627 aaKnown RBP1.28□□□□□ -2.2
TDP1-217ENST00000557782 COL6A3P12111 3177 aa1.28□□□□□ -2.21
TDP1-217ENST00000557782 ASH1LQ9NR48 2969 aaKnown RBP1.27□□□□□ -2.21
TDP1-217ENST00000557782 C7orf77A4D0Y5 90 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 G3V318 75 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 STATHP02808 62 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 KRTAP5-1Q6L8H4 278 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 ALKAL2Q6UX46 152 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 TOMM5Q8N4H5 51 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 SPRR4Q96PI1 79 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 CMC2Q9NRP2 79 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 HIGD1BQ9P298 99 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 TRIOBPQ9H2D6 2365 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 CACNA1CQ13936 2221 aa1.27□□□□□ -2.21
TDP1-217ENST00000557782 REV3LO60673 3130 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 CHD7Q9P2D1 2997 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 FXYD6-FXYD2A0A087WZ82 144 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 SNRPGP15A8MWD9 76 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 PDCD5O14737 125 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 HMGN2P05204 90 aaKnown RBP1.26□□□□□ -2.21
TDP1-217ENST00000557782 KRTAP10-4P60372 401 aaPredicted RBP1.26□□□□□ -2.21
TDP1-217ENST00000557782 HMGN3Q15651 99 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 ETDBQ3ZM63 59 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 TMEM263Q8WUH6 116 aaKnown RBP1.26□□□□□ -2.21
TDP1-217ENST00000557782 COX14Q96I36 57 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 S100A13Q99584 98 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 FXYD6Q9H0Q3 95 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 LINC00472Q9H8W2 130 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 ABRACLQ9P1F3 81 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 CHD9Q3L8U1 2897 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 TTC28Q96AY4 2481 aa1.26□□□□□ -2.21
TDP1-217ENST00000557782 FBN3Q75N90 2809 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 BRCA2P51587 3418 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 GCN1Q92616 2671 aaKnown RBP1.25□□□□□ -2.21
TDP1-217ENST00000557782 ABCA12Q86UK0 2595 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 IFI6P09912 130 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 HAMPP81172 84 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 LINC01590Q5TEZ4 76 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 LINC00846Q9NV44 126 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 CADP27708 2225 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 MYO18BQ8IUG5 2567 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 NOTCH2Q04721 2471 aa1.25□□□□□ -2.21
TDP1-217ENST00000557782 C5orf42Q9H799 3197 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 LAMA2P24043 3122 aaKnown RBP1.24□□□□□ -2.21
TDP1-217ENST00000557782 UNC80Q8N2C7 3258 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 TPRP12270 2363 aaKnown RBP1.24□□□□□ -2.21
TDP1-217ENST00000557782 C2CD3Q4AC94 2353 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 NAV3Q8IVL0 2385 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 KANTRA0A1W2PQU2 76 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 F8WEM9 126 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 H3BSH0 61 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 ARMS2P0C7Q2 107 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 DEFA5Q01523 94 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 LCE1CQ5T751 118 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 LCE1BQ5T7P3 118 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 Q6JHZ5 121 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 UBE2DNLQ8IWF7 75 aa1.24□□□□□ -2.21
TDP1-217ENST00000557782 EYSQ5T1H1 3165 aa1.23□□□□□ -2.21
TDP1-217ENST00000557782 SZT2Q5T011 3432 aa1.23□□□□□ -2.21
TDP1-217ENST00000557782 SFTA3P0C7M3 94 aa1.23□□□□□ -2.21
TDP1-217ENST00000557782 RPS27P42677 84 aaKnown RBP1.23□□□□□ -2.21
TDP1-217ENST00000557782 TDRG1Q3Y452 100 aa1.23□□□□□ -2.21
TDP1-217ENST00000557782 NMES1Q9C002 83 aa1.23□□□□□ -2.21
TDP1-217ENST00000557782 ITPR3Q14573 2671 aa1.23□□□□□ -2.21
TDP1-217ENST00000557782 ASXL3Q9C0F0 2248 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms