RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 A0A0J9YXV3 536 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 CTXND1A0A1B0GTU2 59 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 GRIFINA4D1Z8 144 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 RPL37AP8A6NKH3 93 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 M0R381 172 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 NDUFS5O43920 106 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 ARMS2P0C7Q2 107 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 IGLC6P0CF74 106 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 GCHFRP30047 84 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 PSMB2P49721 201 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 TMEM258P61165 79 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 PRR3P79522 188 aaKnown RBP3.67□□□□□ -1.82
VPS33B-207ENST00000557470 TWIST1Q15672 202 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 ETDBQ3ZM63 59 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 C9orf153Q5TBE3 101 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 NOTCH2NLQ7Z3S9 236 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 ATOH7Q8N100 152 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 LINC00269Q8N2A0 174 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 C3orf22Q8N5N4 141 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 C7orf33Q8WU49 177 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 CHCHD1Q96BP2 118 aaKnown RBP3.67□□□□□ -1.82
VPS33B-207ENST00000557470 RNF185Q96GF1 192 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 CHCHD5Q9BSY4 110 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 PRR34Q9NV39 138 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 PLAC8Q9NZF1 115 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 EPDR1Q9UM22 224 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 KIF25-AS1Q9Y6Z4 181 aa3.67□□□□□ -1.82
VPS33B-207ENST00000557470 IGLV10-54A0A075B6I4 117 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 CRIP1P50238 77 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 KRTAP10-8P60410 259 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 TSKUQ8WUA8 353 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 COPS9Q8WXC6 57 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 LINC00526Q96FQ7 95 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 C20orf78Q9BR46 151 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 HIGD1BQ9P298 99 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 LAMTOR3Q9UHA4 124 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 PHLDA3Q9Y5J5 127 aa3.66□□□□□ -1.82
VPS33B-207ENST00000557470 SH2D1AO60880 128 aa3.65□□□□□ -1.83
VPS33B-207ENST00000557470 APCSP02743 223 aa3.65□□□□□ -1.83
VPS33B-207ENST00000557470 HERVK_113P63121 156 aa3.65□□□□□ -1.83
VPS33B-207ENST00000557470 KIAA0087Q14695 138 aa3.65□□□□□ -1.83
VPS33B-207ENST00000557470 NTM-AS1Q6ZSK4 140 aa3.65□□□□□ -1.83
VPS33B-207ENST00000557470 Q86TA4 180 aa3.65□□□□□ -1.83
VPS33B-207ENST00000557470 TEN1Q86WV5 123 aa3.65□□□□□ -1.83
VPS33B-207ENST00000557470 NKAPP1Q8N9T2 125 aa3.65□□□□□ -1.83
VPS33B-207ENST00000557470 NAA38Q9BRA0 125 aaKnown RBP3.65□□□□□ -1.83
VPS33B-207ENST00000557470 TMSB15BA0A087X1C1 80 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.64□□□□□ -1.83
VPS33B-207ENST00000557470 IGHV1-24A0A0C4DH33 117 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 COX6A2Q02221 97 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 REG3AQ06141 175 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 ZNF56Q15929 161 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 LINC00173Q6ZV60 143 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 C2orf91Q6ZV80 131 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 NUP35Q8NFH5 326 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 TMEM167BQ9NRX6 74 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 PRO0461Q9UI25 63 aa3.64□□□□□ -1.83
VPS33B-207ENST00000557470 MUC2Q02817 5179 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 LPAP08519 4548 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 TRBV20-1A0A075B6N2 111 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 IGKV2-24A0A0C4DH68 120 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 TRBV6-1A0A0K0K1D8 114 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 A0A1B0GXF2 115 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 NDUFC2-KCTD14E9PQ53 114 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 PEX7O00628 323 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 TRACP01848 142 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 SCGB1C2P0DMR2 95 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 CRYGAP11844 174 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 SPINK6Q6UWN8 80 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 ANKRD29Q8N6D5 301 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 C20orf203Q8NBC4 194 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 FMC1Q96HJ9 113 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 GFRA4Q9GZZ7 299 aa3.63□□□□□ -1.83
VPS33B-207ENST00000557470 IGLV4-60A0A075B6I1 120 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 TRBV25-1A0A075B6N4 114 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 SMIM26A0A096LP01 95 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 TRBV7-7A0A0K0K1E9 115 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 LOC107984640A0A0U1RRK4 108 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 LEPROTL1O95214 131 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 NMUP48645 174 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 ADAMTSL4-AS1Q5T5F5 129 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 LINC01545Q5VT33 79 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 C15orf56Q8N910 161 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 PYGO1Q9Y3Y4 419 aa3.62□□□□□ -1.83
VPS33B-207ENST00000557470 A0A096LNI7 61 aa3.61□□□□□ -1.83
VPS33B-207ENST00000557470 PSPHP1O15172 72 aa3.61□□□□□ -1.83
VPS33B-207ENST00000557470 LTAP01374 205 aa3.61□□□□□ -1.83
VPS33B-207ENST00000557470 LINC01547P58512 204 aaPredicted RBP3.61□□□□□ -1.83
VPS33B-207ENST00000557470 PRR4Q16378 134 aa3.61□□□□□ -1.83
VPS33B-207ENST00000557470 HIGD2BQ4VC39 106 aa3.61□□□□□ -1.83
VPS33B-207ENST00000557470 HRCT1Q6UXD1 115 aa3.61□□□□□ -1.83
VPS33B-207ENST00000557470 SCGB1D4Q6XE38 83 aa3.61□□□□□ -1.83
VPS33B-207ENST00000557470 FAT4Q6V0I7 4981 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 A0A1B0GUV1 79 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 A8MWL6 223 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 C8orf87E5RJ46 101 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 ACYP1P07311 99 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 FGF6P10767 208 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 COX7CP15954 63 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms