RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 MIAQ16674 131 aa3.97□□□□□ -1.77
FOXN3-215ENST00000557261 SPANXB1Q9NS25 103 aaPredicted RBP3.97□□□□□ -1.77
FOXN3-215ENST00000557261 CDKN2A-AS1Q9UH64 79 aa3.97□□□□□ -1.77
FOXN3-215ENST00000557261 TRAV13-1A0A0B4J241 112 aa3.96□□□□□ -1.78
FOXN3-215ENST00000557261 ZNF815PA8K554 130 aa3.96□□□□□ -1.78
FOXN3-215ENST00000557261 TMEM262E9PQX1 116 aa3.96□□□□□ -1.78
FOXN3-215ENST00000557261 NDUFA1O15239 70 aa3.96□□□□□ -1.78
FOXN3-215ENST00000557261 TIMM17BO60830 172 aa3.96□□□□□ -1.78
FOXN3-215ENST00000557261 IGHV3-30-3P0DP02 117 aa3.96□□□□□ -1.78
FOXN3-215ENST00000557261 RNASE13Q5GAN3 156 aaKnown RBP3.96□□□□□ -1.78
FOXN3-215ENST00000557261 C10orf126Q8N4M7 172 aa3.96□□□□□ -1.78
FOXN3-215ENST00000557261 TP73-AS1Q9UF72 201 aa3.96□□□□□ -1.78
FOXN3-215ENST00000557261 CSMD3Q7Z407 3707 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 TENM2Q9NT68 2774 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 TMEM238C9JI98 176 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 CRPP02741 224 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 ANGP03950 147 aaKnown RBP3.95□□□□□ -1.78
FOXN3-215ENST00000557261 CXCL5P42830 114 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 CCL18P55774 89 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 TSPEAR-AS2P59090 65 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 ESRGQ1W209 222 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 LINC00269Q8N2A0 174 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 MUC7Q8TAX7 377 aa3.95□□□□□ -1.78
FOXN3-215ENST00000557261 COX6A2Q02221 97 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 HIGD2BQ4VC39 106 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 BVES-AS1Q5T3Y7 98 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 SCGB1D4Q6XE38 83 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 WFDC10BQ8IUB3 73 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 Q8IZM0 81 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 COPS9Q8WXC6 57 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 ZNF625Q96I27 306 aaPredicted RBP3.94□□□□□ -1.78
FOXN3-215ENST00000557261 SNHG12Q9BXW3 62 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 NDUFA12Q9UI09 145 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 KLK5Q9Y337 293 aaPredicted RBP3.94□□□□□ -1.78
FOXN3-215ENST00000557261 HYDINQ4G0P3 5121 aa3.94□□□□□ -1.78
FOXN3-215ENST00000557261 TRAV8-3A0A0A6YYJ7 113 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 FAM168BA1KXE4 195 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 H0Y9J4 135 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 COX7A2LO14548 114 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 APOMO95445 188 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 SPINK8P0C7L1 97 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 COL5A1-AS1Q5SY13 56 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 LYSTQ99698 3801 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 SPANXDQ9BXN6 97 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 KRTAP1-5Q9BYS1 174 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 SPANXCQ9NY87 97 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 LINC00588Q9Y4M8 146 aa3.93□□□□□ -1.78
FOXN3-215ENST00000557261 PLECQ15149 4684 aaKnown RBP3.93□□□□□ -1.78
FOXN3-215ENST00000557261 IGHV3-64A0A075B6Q5 118 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 IBA57-AS1B1ANH7 110 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 IGLL5B9A064 214 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 IFITM1P13164 125 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 XCL1P47992 114 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 CIRBPQ14011 172 aaKnown RBP3.92□□□□□ -1.78
FOXN3-215ENST00000557261 ENHOQ6UWT2 76 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 COX7B2Q8TF08 81 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 ORAOV1Q8WV07 137 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 RMI2Q96E14 147 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 TTTY13Q9BZ97 58 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 KLK12Q9UKR0 248 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 APLNQ9ULZ1 77 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 STARD9Q9P2P6 4700 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
FOXN3-215ENST00000557261 GVQW2A0A096LPI5 108 aaPredicted RBP3.91□□□□□ -1.78
FOXN3-215ENST00000557261 IGHV3-30P01768 117 aa3.91□□□□□ -1.78
FOXN3-215ENST00000557261 IGHV3-30-5P0DP03 117 aa3.91□□□□□ -1.78
FOXN3-215ENST00000557261 COX17Q14061 63 aa3.91□□□□□ -1.78
FOXN3-215ENST00000557261 TTC32Q5I0X7 151 aa3.91□□□□□ -1.78
FOXN3-215ENST00000557261 KRTAP26-1Q6PEX3 210 aa3.91□□□□□ -1.78
FOXN3-215ENST00000557261 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
FOXN3-215ENST00000557261 VPS13DQ5THJ4 4388 aa3.91□□□□□ -1.78
FOXN3-215ENST00000557261 RYR1P21817 5038 aa3.9□□□□□ -1.78
FOXN3-215ENST00000557261 HERC2O95714 4834 aa3.9□□□□□ -1.78
FOXN3-215ENST00000557261 IGKV3OR2-268A0A0C4DH90 116 aa3.9□□□□□ -1.79
FOXN3-215ENST00000557261 IGHV3-33P01772 117 aa3.9□□□□□ -1.79
FOXN3-215ENST00000557261 HINT1P49773 126 aaPredicted RBP3.9□□□□□ -1.79
FOXN3-215ENST00000557261 CLPSL2Q6UWE3 100 aa3.9□□□□□ -1.79
FOXN3-215ENST00000557261 UBE2WQ96B02 151 aa3.9□□□□□ -1.79
FOXN3-215ENST00000557261 CBY1Q9Y3M2 126 aa3.9□□□□□ -1.79
FOXN3-215ENST00000557261 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.89□□□□□ -1.79
FOXN3-215ENST00000557261 A0A0B4J2C4 111 aa3.89□□□□□ -1.79
FOXN3-215ENST00000557261 LOC107984156A0A0G2JMH3 177 aa3.89□□□□□ -1.79
FOXN3-215ENST00000557261 FXYD2P54710 66 aa3.89□□□□□ -1.79
FOXN3-215ENST00000557261 CD164Q04900 197 aa3.89□□□□□ -1.79
FOXN3-215ENST00000557261 C5orf38Q86SI9 138 aa3.89□□□□□ -1.79
FOXN3-215ENST00000557261 ARL17AQ8IVW1 177 aa3.89□□□□□ -1.79
FOXN3-215ENST00000557261 IGLV10-54A0A075B6I4 117 aa3.88□□□□□ -1.79
FOXN3-215ENST00000557261 TRBV30A0A0K0K1B3 111 aa3.88□□□□□ -1.79
FOXN3-215ENST00000557261 CKS1BP61024 79 aa3.88□□□□□ -1.79
FOXN3-215ENST00000557261 SPAG11BQ08648 103 aa3.88□□□□□ -1.79
FOXN3-215ENST00000557261 C6orf99Q4VX62 202 aa3.88□□□□□ -1.79
FOXN3-215ENST00000557261 ALMS1Q8TCU4 4167 aa3.88□□□□□ -1.79
FOXN3-215ENST00000557261 BATFQ16520 125 aa3.87□□□□□ -1.79
FOXN3-215ENST00000557261 MEIG1Q5JSS6 88 aa3.87□□□□□ -1.79
FOXN3-215ENST00000557261 UBE2DNLQ8IWF7 75 aa3.87□□□□□ -1.79
FOXN3-215ENST00000557261 TOMM7Q9P0U1 55 aa3.87□□□□□ -1.79
FOXN3-215ENST00000557261 ERG28Q9UKR5 140 aa3.87□□□□□ -1.79
FOXN3-215ENST00000557261 IGKV2D-24A0A075B6R9 120 aa3.86□□□□□ -1.79
FOXN3-215ENST00000557261 NDUFC2-KCTD14E9PQ53 114 aa3.86□□□□□ -1.79
FOXN3-215ENST00000557261 TAX1BP3O14907 124 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms