RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 UBE2BP63146 152 aa3.25□□□□□ -1.89
PRPF39-211ENST00000556782 RHEBQ15382 184 aa3.25□□□□□ -1.89
PRPF39-211ENST00000556782 COX19Q49B96 90 aa3.25□□□□□ -1.89
PRPF39-211ENST00000556782 C10orf91Q5T1B1 145 aa3.25□□□□□ -1.89
PRPF39-211ENST00000556782 LINC00469Q8N7U9 141 aa3.25□□□□□ -1.89
PRPF39-211ENST00000556782 DIRC1Q969H9 104 aa3.25□□□□□ -1.89
PRPF39-211ENST00000556782 CARHSP1Q9Y2V2 147 aaKnown RBP3.25□□□□□ -1.89
PRPF39-211ENST00000556782 IGLV5-37A0A075B6J1 123 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 FABP9Q0Z7S8 132 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 PDZD11Q5EBL8 140 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 FA2HQ7L5A8 372 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 SMIM29Q86T20 159 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 COX7B2Q8TF08 81 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 CST9LQ9H4G1 147 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 XAGE1AQ9HD64 81 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 RPS10P5Q9NQ39 176 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 SMCO4Q9NRQ5 59 aa3.24□□□□□ -1.89
PRPF39-211ENST00000556782 A0A096LNJ9 63 aa3.23□□□□□ -1.89
PRPF39-211ENST00000556782 NUPR1O60356 82 aa3.23□□□□□ -1.89
PRPF39-211ENST00000556782 KRTAP1-4P0C5Y4 121 aa3.23□□□□□ -1.89
PRPF39-211ENST00000556782 SPINK8P0C7L1 97 aa3.23□□□□□ -1.89
PRPF39-211ENST00000556782 PMVKQ15126 192 aa3.23□□□□□ -1.89
PRPF39-211ENST00000556782 TP73-AS1Q9UF72 201 aa3.23□□□□□ -1.89
PRPF39-211ENST00000556782 C22orf24Q9Y442 160 aa3.23□□□□□ -1.89
PRPF39-211ENST00000556782 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
PRPF39-211ENST00000556782 IGLC3P0DOY3 106 aa3.22□□□□□ -1.89
PRPF39-211ENST00000556782 LBHQ53QV2 105 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-211ENST00000556782 C18orf32Q8TCD1 76 aa3.22□□□□□ -1.89
PRPF39-211ENST00000556782 H3BRM9 83 aa3.21□□□□□ -1.9
PRPF39-211ENST00000556782 ZNF861PO60384 105 aa3.21□□□□□ -1.9
PRPF39-211ENST00000556782 HBDP02042 147 aa3.21□□□□□ -1.9
PRPF39-211ENST00000556782 APOC3P02656 99 aa3.21□□□□□ -1.9
PRPF39-211ENST00000556782 LINC00614P0C842 121 aa3.21□□□□□ -1.9
PRPF39-211ENST00000556782 ZNF22P17026 224 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-211ENST00000556782 MRPL55Q7Z7F7 128 aaKnown RBP3.21□□□□□ -1.9
PRPF39-211ENST00000556782 TRAPPC1Q9Y5R8 145 aa3.21□□□□□ -1.9
PRPF39-211ENST00000556782 LPAP08519 4548 aa3.21□□□□□ -1.9
PRPF39-211ENST00000556782 BCE1O60756 84 aa3.2□□□□□ -1.9
PRPF39-211ENST00000556782 ATP5LO75964 103 aa3.2□□□□□ -1.9
PRPF39-211ENST00000556782 SNAPINO95295 136 aa3.2□□□□□ -1.9
PRPF39-211ENST00000556782 RPL13AP40429 203 aaKnown RBP3.2□□□□□ -1.9
PRPF39-211ENST00000556782 NDUFA6P56556 154 aa3.2□□□□□ -1.9
PRPF39-211ENST00000556782 SEC61BP60468 96 aaKnown RBP3.2□□□□□ -1.9
PRPF39-211ENST00000556782 RAB5BP61020 215 aa3.2□□□□□ -1.9
PRPF39-211ENST00000556782 PMCHL1Q16048 86 aa3.2□□□□□ -1.9
PRPF39-211ENST00000556782 NDUFA5Q16718 116 aa3.2□□□□□ -1.9
PRPF39-211ENST00000556782 SVBPQ8N300 66 aa3.2□□□□□ -1.9
PRPF39-211ENST00000556782 LINC00167Q96N53 147 aa3.2□□□□□ -1.9
PRPF39-211ENST00000556782 C11orf86A6NJI1 115 aa3.19□□□□□ -1.9
PRPF39-211ENST00000556782 RPL37AP8A6NKH3 93 aa3.19□□□□□ -1.9
PRPF39-211ENST00000556782 PFN2P35080 140 aa3.19□□□□□ -1.9
PRPF39-211ENST00000556782 RPL28P46779 137 aaKnown RBP3.19□□□□□ -1.9
PRPF39-211ENST00000556782 NKAPP1Q8N9T2 125 aa3.19□□□□□ -1.9
PRPF39-211ENST00000556782 YPEL4Q96NS1 127 aa3.19□□□□□ -1.9
PRPF39-211ENST00000556782 SCO1O75880 301 aa3.18□□□□□ -1.9
PRPF39-211ENST00000556782 VPREB1P12018 145 aa3.18□□□□□ -1.9
PRPF39-211ENST00000556782 TMEM170BQ5T4T1 132 aa3.18□□□□□ -1.9
PRPF39-211ENST00000556782 SFTA2Q6UW10 78 aa3.18□□□□□ -1.9
PRPF39-211ENST00000556782 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
PRPF39-211ENST00000556782 BAGE3Q86Y29 109 aa3.18□□□□□ -1.9
PRPF39-211ENST00000556782 KRTAP13-1Q8IUC0 172 aa3.18□□□□□ -1.9
PRPF39-211ENST00000556782 SND1-IT1Q9HBX3 110 aa3.18□□□□□ -1.9
PRPF39-211ENST00000556782 ERG28Q9UKR5 140 aa3.18□□□□□ -1.9
PRPF39-211ENST00000556782 RNF213Q63HN8 5207 aa3.17□□□□□ -1.9
PRPF39-211ENST00000556782 IGKV2-28A0A075B6P5 120 aa3.17□□□□□ -1.9
PRPF39-211ENST00000556782 A0A087X002 238 aa3.17□□□□□ -1.9
PRPF39-211ENST00000556782 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
PRPF39-211ENST00000556782 IGKV2D-28P01615 120 aa3.17□□□□□ -1.9
PRPF39-211ENST00000556782 UBE2AP49459 152 aa3.17□□□□□ -1.9
PRPF39-211ENST00000556782 COX17Q14061 63 aa3.17□□□□□ -1.9
PRPF39-211ENST00000556782 Q8NDZ9 215 aa3.17□□□□□ -1.9
PRPF39-211ENST00000556782 CHCHD1Q96BP2 118 aaKnown RBP3.17□□□□□ -1.9
PRPF39-211ENST00000556782 ZNF625Q96I27 306 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-211ENST00000556782 CHTOPQ9Y3Y2 248 aaKnown RBP3.17□□□□□ -1.9
PRPF39-211ENST00000556782 TMEM223A0PJW6 202 aa3.16□□□□□ -1.9
PRPF39-211ENST00000556782 CRYGAP11844 174 aa3.16□□□□□ -1.9
PRPF39-211ENST00000556782 RPL24P83731 157 aaKnown RBP3.16□□□□□ -1.9
PRPF39-211ENST00000556782 CBLN2Q8IUK8 224 aa3.16□□□□□ -1.9
PRPF39-211ENST00000556782 IFI27L1Q96BM0 104 aa3.16□□□□□ -1.9
PRPF39-211ENST00000556782 TMEM126AQ9H061 195 aa3.16□□□□□ -1.9
PRPF39-211ENST00000556782 TMEM238C9JI98 176 aa3.15□□□□□ -1.91
PRPF39-211ENST00000556782 M0R378 163 aa3.15□□□□□ -1.91
PRPF39-211ENST00000556782 HSBP1O75506 76 aa3.15□□□□□ -1.91
PRPF39-211ENST00000556782 PRLHP81277 87 aa3.15□□□□□ -1.91
PRPF39-211ENST00000556782 PRR4Q16378 134 aa3.15□□□□□ -1.91
PRPF39-211ENST00000556782 KRTAP13-2Q52LG2 175 aa3.15□□□□□ -1.91
PRPF39-211ENST00000556782 TYMSOSQ8TAI1 123 aa3.15□□□□□ -1.91
PRPF39-211ENST00000556782 ANAPC11Q9NYG5 84 aa3.15□□□□□ -1.91
PRPF39-211ENST00000556782 A0A0U1RRA0 63 aa3.14□□□□□ -1.91
PRPF39-211ENST00000556782 TSPAN13O95857 204 aa3.14□□□□□ -1.91
PRPF39-211ENST00000556782 TRGC2P03986 189 aa3.14□□□□□ -1.91
PRPF39-211ENST00000556782 LINC00158P58513 81 aa3.14□□□□□ -1.91
PRPF39-211ENST00000556782 FAM229BQ4G0N7 80 aa3.14□□□□□ -1.91
PRPF39-211ENST00000556782 FAM19A1Q7Z5A9 133 aa3.14□□□□□ -1.91
PRPF39-211ENST00000556782 FAM19A2Q8N3H0 131 aa3.14□□□□□ -1.91
PRPF39-211ENST00000556782 H0Y8G0 127 aa3.13□□□□□ -1.91
PRPF39-211ENST00000556782 SERF1AO75920 110 aa3.13□□□□□ -1.91
PRPF39-211ENST00000556782 SMIM13P0DJ93 91 aa3.13□□□□□ -1.91
PRPF39-211ENST00000556782 HERV-K104P63124 156 aa3.13□□□□□ -1.91
PRPF39-211ENST00000556782 MEIG1Q5JSS6 88 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms