RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-204	ENST00000555890	COPS9	Q8WXC6	57 aa		4.64	□□□□□ -1.67
SLIRP-204	ENST00000555890	RAB37	Q96AX2	223 aa		4.64	□□□□□ -1.67
SLIRP-204	ENST00000555890	IGLV5-52	A0A0A0MRZ9	124 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	IGHV3-30	P01768	117 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	PRSS2	P07478	247 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	IGHV3-30-5	P0DP03	117 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	IFITM1	P13164	125 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	REG3A	Q06141	175 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	MUSTN1	Q8IVN3	82 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	PRR26	Q8N8Z3	221 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	SPANXD	Q9BXN6	97 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	SPANXC	Q9NY87	97 aa		4.63	□□□□□ -1.67
SLIRP-204	ENST00000555890	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890		A0A1B0GWB2	263 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890		H3BUT2	72 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890		K7EP13	123 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890	FABP2	P12104	132 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890	XCL1	P47992	114 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890	MIA	Q16674	131 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890	MEIG1	Q5JSS6	88 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890	GTF2H5	Q6ZYL4	71 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890	C5orf38	Q86SI9	138 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890	C15orf53	Q8NAA6	179 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890	TOMM7	Q9P0U1	55 aa		4.62	□□□□□ -1.67
SLIRP-204	ENST00000555890		A0A1W2PPM0	123 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	IGLL5	B9A064	214 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890		K7ERJ3	54 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	COX7A2L	O14548	114 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	APOM	O95445	188 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	CRP	P02741	224 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	C6orf226	Q5I0X4	101 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	CLPSL2	Q6UWE3	100 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	ZNF625	Q96I27	306 aa	Predicted RBP	4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	LITAF	Q99732	161 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	KLK12	Q9UKR0	248 aa		4.61	□□□□□ -1.67
SLIRP-204	ENST00000555890	IGLV5-37	A0A075B6J1	123 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890	TRAV8-4	A0A0B4J246	113 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890		A0A0U1RRA0	63 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890	IGHV3-33	P01772	117 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890	ESRG	Q1W209	222 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890	ADAMTSL4-AS1	Q5T5F5	129 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890		Q8IZM0	81 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890	PRR34	Q9NV39	138 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890	PRO1854	Q9UHT4	67 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890	VPS13B	Q7Z7G8	4022 aa		4.6	□□□□□ -1.67
SLIRP-204	ENST00000555890	IGLV10-54	A0A075B6I4	117 aa		4.59	□□□□□ -1.67
SLIRP-204	ENST00000555890		A0A0B4J2C4	111 aa		4.59	□□□□□ -1.67
SLIRP-204	ENST00000555890	CFC1B	P0CG36	223 aa		4.59	□□□□□ -1.67
SLIRP-204	ENST00000555890	CFC1	P0CG37	223 aa		4.59	□□□□□ -1.67
SLIRP-204	ENST00000555890	CXCL5	P42830	114 aa		4.59	□□□□□ -1.67
SLIRP-204	ENST00000555890	CKS1B	P61024	79 aa		4.59	□□□□□ -1.67
SLIRP-204	ENST00000555890	LYRM7	Q5U5X0	104 aa		4.59	□□□□□ -1.67
SLIRP-204	ENST00000555890	WFDC10B	Q8IUB3	73 aa		4.59	□□□□□ -1.67
SLIRP-204	ENST00000555890	PPDPF	Q9H3Y8	114 aa		4.59	□□□□□ -1.67
SLIRP-204	ENST00000555890	IBA57-AS1	B1ANH7	110 aa		4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890		K7EP34	96 aa		4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	CCL18	P55774	89 aa		4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	LINC01556	Q5JQF7	62 aa		4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	ENHO	Q6UWT2	76 aa		4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	LINC00308	Q8TCZ7	52 aa		4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	UBE2W	Q96B02	151 aa		4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	NAA38	Q9BRA0	125 aa	Known RBP	4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	ERG28	Q9UKR5	140 aa		4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	KLK5	Q9Y337	293 aa	Predicted RBP	4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	SPCS1	Q9Y6A9	102 aa		4.58	□□□□□ -1.68
SLIRP-204	ENST00000555890	TSPAN13	O95857	204 aa		4.57	□□□□□ -1.68
SLIRP-204	ENST00000555890	LINC00158	P58513	81 aa		4.57	□□□□□ -1.68
SLIRP-204	ENST00000555890	NPC2	P61916	151 aa		4.57	□□□□□ -1.68
SLIRP-204	ENST00000555890	DAND5	Q8N907	189 aa		4.57	□□□□□ -1.68
SLIRP-204	ENST00000555890	LOC107984156	A0A0G2JMH3	177 aa		4.56	□□□□□ -1.68
SLIRP-204	ENST00000555890	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.56	□□□□□ -1.68
SLIRP-204	ENST00000555890	DNAH10OS	P0CZ25	163 aa		4.56	□□□□□ -1.68
SLIRP-204	ENST00000555890	SCGB1C2	P0DMR2	95 aa		4.56	□□□□□ -1.68
SLIRP-204	ENST00000555890	PSMB2	P49721	201 aa		4.56	□□□□□ -1.68
SLIRP-204	ENST00000555890		Q1RN00	199 aa		4.56	□□□□□ -1.68
SLIRP-204	ENST00000555890	ARL17A	Q8IVW1	177 aa		4.56	□□□□□ -1.68
SLIRP-204	ENST00000555890	C16orf90	A8MZG2	172 aa		4.55	□□□□□ -1.68
SLIRP-204	ENST00000555890		H7C2G1	150 aa		4.55	□□□□□ -1.68
SLIRP-204	ENST00000555890	PFN2	P35080	140 aa		4.55	□□□□□ -1.68
SLIRP-204	ENST00000555890	SPAG11B	Q08648	103 aa		4.55	□□□□□ -1.68
SLIRP-204	ENST00000555890	COX17	Q14061	63 aa		4.55	□□□□□ -1.68
SLIRP-204	ENST00000555890	KIAA0087	Q14695	138 aa		4.55	□□□□□ -1.68
SLIRP-204	ENST00000555890	MIR7-3HG	Q8N6C7	128 aa		4.55	□□□□□ -1.68
SLIRP-204	ENST00000555890	PKHD1L1	Q86WI1	4243 aa		4.54	□□□□□ -1.68
SLIRP-204	ENST00000555890	TRBV20-1	A0A075B6N2	111 aa		4.54	□□□□□ -1.68
SLIRP-204	ENST00000555890	COX6C	P09669	75 aa		4.54	□□□□□ -1.68
SLIRP-204	ENST00000555890	C2orf82	Q6UX34	121 aa		4.54	□□□□□ -1.68
SLIRP-204	ENST00000555890	RMI2	Q96E14	147 aa		4.54	□□□□□ -1.68
SLIRP-204	ENST00000555890	LINC00588	Q9Y4M8	146 aa		4.54	□□□□□ -1.68
SLIRP-204	ENST00000555890	IGKV2D-24	A0A075B6R9	120 aa		4.53	□□□□□ -1.68
SLIRP-204	ENST00000555890	TRAV13-2	A0A0B4J235	113 aa		4.53	□□□□□ -1.68
SLIRP-204	ENST00000555890	TRBV30	A0A0K0K1B3	111 aa		4.53	□□□□□ -1.68
SLIRP-204	ENST00000555890		A0A0U1RQV1	116 aa		4.53	□□□□□ -1.68
SLIRP-204	ENST00000555890	RPL13A	P40429	203 aa	Known RBP	4.53	□□□□□ -1.68
SLIRP-204	ENST00000555890	KRTAP10-2	P60368	255 aa		4.53	□□□□□ -1.68
SLIRP-204	ENST00000555890	SOSTDC1	Q6X4U4	206 aa		4.53	□□□□□ -1.68
SLIRP-204	ENST00000555890	UPK3B	Q9BT76	320 aa		4.53	□□□□□ -1.68
SLIRP-204	ENST00000555890	SND1-IT1	Q9HBX3	110 aa		4.53	□□□□□ -1.68

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