RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 MUSTN1Q8IVN3 82 aa6.25□□□□□ -1.41
SIX1-204ENST00000555627 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
SIX1-204ENST00000555627 A4D1N5 150 aa6.24□□□□□ -1.41
SIX1-204ENST00000555627 M0R2N4 97 aa6.24□□□□□ -1.41
SIX1-204ENST00000555627 TAX1BP3O14907 124 aa6.24□□□□□ -1.41
SIX1-204ENST00000555627 SRSF9Q13242 221 aaKnown RBP eCLIP6.24□□□□□ -1.41
SIX1-204ENST00000555627 Q8NDZ9 215 aa6.24□□□□□ -1.41
SIX1-204ENST00000555627 NHP2Q9NX24 153 aaKnown RBP6.24□□□□□ -1.41
SIX1-204ENST00000555627 COX11Q9Y6N1 276 aa6.24□□□□□ -1.41
SIX1-204ENST00000555627 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
SIX1-204ENST00000555627 TRBV30A0A0K0K1B3 111 aa6.23□□□□□ -1.41
SIX1-204ENST00000555627 F8WDY8 70 aa6.23□□□□□ -1.41
SIX1-204ENST00000555627 ZNF561-AS1K7EIQ3 104 aa6.23□□□□□ -1.41
SIX1-204ENST00000555627 IFITM1P13164 125 aa6.23□□□□□ -1.41
SIX1-204ENST00000555627 PFN2P35080 140 aa6.23□□□□□ -1.41
SIX1-204ENST00000555627 CAMK2N2Q96S95 79 aa6.23□□□□□ -1.41
SIX1-204ENST00000555627 A0A0B4J2C4 111 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 LOC107984156A0A0G2JMH3 177 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 LY6G6CO95867 125 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 CFC1BP0CG36 223 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 CFC1P0CG37 223 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 LINC00158P58513 81 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 COX17Q14061 63 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 LBHQ53QV2 105 aaPredicted RBP6.22□□□□□ -1.41
SIX1-204ENST00000555627 COL5A1-AS1Q5SY13 56 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 ARL17AQ8IVW1 177 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 CARD19Q96LW7 228 aa6.22□□□□□ -1.41
SIX1-204ENST00000555627 A6NDN8 102 aa6.21□□□□□ -1.42
SIX1-204ENST00000555627 SYCNQ0VAF6 134 aa6.21□□□□□ -1.42
SIX1-204ENST00000555627 CIRBPQ14011 172 aaKnown RBP6.21□□□□□ -1.42
SIX1-204ENST00000555627 SND1-IT1Q9HBX3 110 aa6.21□□□□□ -1.42
SIX1-204ENST00000555627 IGKV2-28A0A075B6P5 120 aa6.2□□□□□ -1.42
SIX1-204ENST00000555627 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
SIX1-204ENST00000555627 A6NJY4 79 aa6.2□□□□□ -1.42
SIX1-204ENST00000555627 IGKV2D-28P01615 120 aa6.2□□□□□ -1.42
SIX1-204ENST00000555627 CNBPP62633 177 aaKnown RBP6.2□□□□□ -1.42
SIX1-204ENST00000555627 RPL24P83731 157 aaKnown RBP6.2□□□□□ -1.42
SIX1-204ENST00000555627 PSCAO43653 123 aa6.19□□□□□ -1.42
SIX1-204ENST00000555627 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
SIX1-204ENST00000555627 RNF151Q2KHN1 245 aa6.19□□□□□ -1.42
SIX1-204ENST00000555627 Q6ZRP5 223 aa6.19□□□□□ -1.42
SIX1-204ENST00000555627 A0A087WTM6 91 aa6.18□□□□□ -1.42
SIX1-204ENST00000555627 A0A1B0GV90 55 aa6.18□□□□□ -1.42
SIX1-204ENST00000555627 NDUFC2-KCTD14E9PQ53 114 aa6.18□□□□□ -1.42
SIX1-204ENST00000555627 TSPAN13O95857 204 aa6.18□□□□□ -1.42
SIX1-204ENST00000555627 LINC00337Q8N6G1 96 aa6.18□□□□□ -1.42
SIX1-204ENST00000555627 NAA38Q9BRA0 125 aaKnown RBP6.18□□□□□ -1.42
SIX1-204ENST00000555627 HMCN2Q8NDA2 5059 aa6.17□□□□□ -1.42
SIX1-204ENST00000555627 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.17□□□□□ -1.42
SIX1-204ENST00000555627 RTL8CO15255 209 aa6.17□□□□□ -1.42
SIX1-204ENST00000555627 C9orf129Q5T035 196 aaKnown RBP6.17□□□□□ -1.42
SIX1-204ENST00000555627 Q8N814 137 aa6.17□□□□□ -1.42
SIX1-204ENST00000555627 RAB37Q96AX2 223 aa6.17□□□□□ -1.42
SIX1-204ENST00000555627 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.16□□□□□ -1.42
SIX1-204ENST00000555627 C9orf118A6NHY6 69 aa6.16□□□□□ -1.42
SIX1-204ENST00000555627 NDUFC2O95298 119 aa6.16□□□□□ -1.42
SIX1-204ENST00000555627 VPREB1P12018 145 aa6.16□□□□□ -1.42
SIX1-204ENST00000555627 RPL13AP40429 203 aaKnown RBP6.16□□□□□ -1.42
SIX1-204ENST00000555627 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
SIX1-204ENST00000555627 C1orf134Q5TEV5 83 aa6.16□□□□□ -1.42
SIX1-204ENST00000555627 XAGE1AQ9HD64 81 aa6.16□□□□□ -1.42
SIX1-204ENST00000555627 PGPEP1Q9NXJ5 209 aa6.16□□□□□ -1.42
SIX1-204ENST00000555627 KRTAP7-1Q8IUC3 87 aa6.15□□□□□ -1.42
SIX1-204ENST00000555627 COPS9Q8WXC6 57 aa6.15□□□□□ -1.42
SIX1-204ENST00000555627 PRO1854Q9UHT4 67 aa6.15□□□□□ -1.42
SIX1-204ENST00000555627 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
SIX1-204ENST00000555627 A0A096LNI7 61 aa6.14□□□□□ -1.43
SIX1-204ENST00000555627 H3BUT2 72 aa6.14□□□□□ -1.43
SIX1-204ENST00000555627 RPL18AQ02543 176 aaKnown RBP6.14□□□□□ -1.43
SIX1-204ENST00000555627 TNP2Q05952 138 aa6.14□□□□□ -1.43
SIX1-204ENST00000555627 LRP1BQ9NZR2 4599 aa6.13□□□□□ -1.43
SIX1-204ENST00000555627 LOC107984640A0A0U1RRK4 108 aa6.13□□□□□ -1.43
SIX1-204ENST00000555627 NCR3O14931 201 aa6.13□□□□□ -1.43
SIX1-204ENST00000555627 PRR3P79522 188 aaKnown RBP6.13□□□□□ -1.43
SIX1-204ENST00000555627 SERTAD4-AS1Q5TG53 156 aa6.13□□□□□ -1.43
SIX1-204ENST00000555627 A0A1W2PPM0 123 aa6.12□□□□□ -1.43
SIX1-204ENST00000555627 TRIAP1O43715 76 aa6.12□□□□□ -1.43
SIX1-204ENST00000555627 FUSP35637 526 aaKnown RBP eCLIP6.12□□□□□ -1.43
SIX1-204ENST00000555627 GAGE2EQ4V326 116 aa6.12□□□□□ -1.43
SIX1-204ENST00000555627 C9orf163Q8N9P6 203 aa6.12□□□□□ -1.43
SIX1-204ENST00000555627 GAGE2DQ9UEU5 116 aa6.12□□□□□ -1.43
SIX1-204ENST00000555627 MYCBP2O75592 4640 aa6.12□□□□□ -1.43
SIX1-204ENST00000555627 IGLV5-37A0A075B6J1 123 aa6.11□□□□□ -1.43
SIX1-204ENST00000555627 FAM168BA1KXE4 195 aa6.11□□□□□ -1.43
SIX1-204ENST00000555627 LINC01620Q4KN68 170 aa6.11□□□□□ -1.43
SIX1-204ENST00000555627 PLA2G2DQ9UNK4 145 aa6.11□□□□□ -1.43
SIX1-204ENST00000555627 APOBP04114 4563 aaKnown RBP6.1□□□□□ -1.43
SIX1-204ENST00000555627 TRAV13-2A0A0B4J235 113 aa6.1□□□□□ -1.43
SIX1-204ENST00000555627 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
SIX1-204ENST00000555627 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
SIX1-204ENST00000555627 H7C2G1 150 aa6.1□□□□□ -1.43
SIX1-204ENST00000555627 PANO1I0J062 215 aa6.1□□□□□ -1.43
SIX1-204ENST00000555627 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
SIX1-204ENST00000555627 C16orf90A8MZG2 172 aa6.09□□□□□ -1.43
SIX1-204ENST00000555627 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
SIX1-204ENST00000555627 GAGE2BQ13066 116 aa6.09□□□□□ -1.43
SIX1-204ENST00000555627 SDIM1Q6ZPB5 146 aa6.09□□□□□ -1.43
SIX1-204ENST00000555627 K7EP34 96 aa6.08□□□□□ -1.44
SIX1-204ENST00000555627 RPL28P46779 137 aaKnown RBP6.08□□□□□ -1.44
SIX1-204ENST00000555627 KRTAP10-2P60368 255 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms