RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 M0R2Z0 102 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 TPT1P13693 172 aaKnown RBP1.26□□□□□ -2.21
SCFD1-210ENST00000553693 HTN1P15515 57 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 RPL37AP61513 92 aaKnown RBP1.26□□□□□ -2.21
SCFD1-210ENST00000553693 WFDC2Q14508 124 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 SPINK13Q1W4C9 94 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 LYPD5Q6UWN5 251 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 FOXI2Q6ZQN5 318 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 WFDC10BQ8IUB3 73 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 BORCS5Q969J3 196 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 HYLS1Q96M11 299 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 PRELID3AQ96N28 172 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 AP1S3Q96PC3 154 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 FAM107BQ9H098 131 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 OTORQ9NRC9 128 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 TIMM8BQ9Y5J9 83 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-210ENST00000553693 IGHV1-58A0A0C4DH39 117 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 hDV103S1A0JD37 113 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 A8MTW9 85 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 F8W1H4 67 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 H3BMG7 143 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 SNAPC5O75971 98 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 NBEAP1P0C6P0 100 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 SCGB1A1P11684 91 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 HIST1H1DP16402 221 aaKnown RBP1.25□□□□□ -2.21
SCFD1-210ENST00000553693 SPINK9Q5DT21 86 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 C1orf137Q5JT78 98 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 PHF5AQ7RTV0 110 aaKnown RBP1.25□□□□□ -2.21
SCFD1-210ENST00000553693 OR8I2Q8N0Y5 310 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 TMEM229BQ8NBD8 167 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 ORMDL1Q9P0S3 153 aa1.25□□□□□ -2.21
SCFD1-210ENST00000553693 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.24□□□□□ -2.21
SCFD1-210ENST00000553693 BORCS7-ASMTA0A0B4J1R7 106 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 H3BRM9 83 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 DPM2O94777 84 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 PPYP01298 95 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 IGLC1P0CG04 106 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 FABP4P15090 132 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 EVI2AP22794 236 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 SNCAP37840 140 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 ETV6P41212 452 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 FXYD4P59646 89 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 RPS28P62857 69 aaKnown RBP1.24□□□□□ -2.21
SCFD1-210ENST00000553693 PRCDQ00LT1 54 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 HSD17B12Q53GQ0 312 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
SCFD1-210ENST00000553693 TMEM91Q6ZNR0 172 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 ZNF818PQ6ZRF7 136 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 TMEM203Q969S6 136 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 LINC01600Q96MT4 127 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 ATG5Q9H1Y0 275 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 RPRMQ9NS64 109 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 FKBP11Q9NYL4 201 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 AP4S1Q9Y587 144 aa1.24□□□□□ -2.21
SCFD1-210ENST00000553693 TRAV30A0A087WSZ9 112 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 IGKV2D-26A0A0A0MRZ7 120 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 LOC100130705A0A1B0GUX0 176 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 EFCAB10A6NFE3 127 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 K7EP13 123 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 DNAL4O96015 105 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 IGHV3-30P01768 117 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 IGHV3-33P01772 117 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 ARL14EPLP0DKL9 152 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 IGHV3-30-5P0DP03 117 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 RPL7P18124 248 aaKnown RBP1.23□□□□□ -2.21
SCFD1-210ENST00000553693 ROMO1P60602 79 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 CATR1Q13166 79 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 SMCO1Q147U7 214 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 PCOTHQ58A44 107 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 HRCT1Q6UXD1 115 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 PATE2Q6UY27 113 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 TMEM263Q8WUH6 116 aaKnown RBP1.23□□□□□ -2.21
SCFD1-210ENST00000553693 GGACTQ9BVM4 153 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 CYSTM1Q9H1C7 97 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 DPH3P1Q9H4G8 78 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 TMEM14CQ9P0S9 112 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 PRO0255Q9UI72 69 aa1.23□□□□□ -2.21
SCFD1-210ENST00000553693 TRGV1A0A0A0MS02 117 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 TRAV12-3A0A0B4J271 114 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 TRBV27A0A0K0K1C4 114 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 IFITM5A6NNB3 132 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 H7BYZ3 331 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 CORTO00230 105 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 TRACP01848 142 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 ARPC4P59998 168 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 RPS25P62851 125 aaKnown RBP1.22□□□□□ -2.21
SCFD1-210ENST00000553693 HIST1H1AQ02539 215 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-210ENST00000553693 LINC01556Q5JQF7 62 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 TCTE3Q8IZS6 198 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 BRK1Q8WUW1 75 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 CARD19Q96LW7 228 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 TSC22D3Q99576 134 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 CDC42SE1Q9NRR8 79 aa1.22□□□□□ -2.21
SCFD1-210ENST00000553693 SNRPGP15A8MWD9 76 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 SPINK4O60575 86 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 SFTA3P0C7M3 94 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 SLC25A4P12235 298 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 COX7CP15954 63 aa1.21□□□□□ -2.22
SCFD1-210ENST00000553693 GNG2P59768 71 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms