RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 A0A087WTM6 91 aa5.47□□□□□ -1.53
RBFOX1-213ENST00000551752 TRAV8-3A0A0A6YYJ7 113 aa5.47□□□□□ -1.53
RBFOX1-213ENST00000551752 IGHV3-73A0A0B4J1V6 119 aa5.47□□□□□ -1.53
RBFOX1-213ENST00000551752 LOC100131303A0A0U1RQF7 123 aa5.47□□□□□ -1.53
RBFOX1-213ENST00000551752 TIMM17BO60830 172 aa5.47□□□□□ -1.53
RBFOX1-213ENST00000551752 FAM104AQ969W3 186 aa5.47□□□□□ -1.53
RBFOX1-213ENST00000551752 LINC01600Q96MT4 127 aa5.47□□□□□ -1.53
RBFOX1-213ENST00000551752 UBE2D4Q9Y2X8 147 aa5.47□□□□□ -1.53
RBFOX1-213ENST00000551752 IGHV3-64A0A075B6Q5 118 aa5.46□□□□□ -1.54
RBFOX1-213ENST00000551752 SMAGPQ0VAQ4 97 aa5.46□□□□□ -1.54
RBFOX1-213ENST00000551752 ATXN8Q156A1 80 aa5.46□□□□□ -1.54
RBFOX1-213ENST00000551752 MIAQ16674 131 aa5.46□□□□□ -1.54
RBFOX1-213ENST00000551752 Q1RN00 199 aa5.46□□□□□ -1.54
RBFOX1-213ENST00000551752 SFTA2Q6UW10 78 aa5.46□□□□□ -1.54
RBFOX1-213ENST00000551752 GEMIN7Q9H840 131 aaKnown RBP5.46□□□□□ -1.54
RBFOX1-213ENST00000551752 NDUFA12Q9UI09 145 aa5.46□□□□□ -1.54
RBFOX1-213ENST00000551752 IGLV5-45A0A087WSX0 123 aa5.45□□□□□ -1.54
RBFOX1-213ENST00000551752 TRBV30A0A0K0K1B3 111 aa5.45□□□□□ -1.54
RBFOX1-213ENST00000551752 IFITM1P13164 125 aa5.45□□□□□ -1.54
RBFOX1-213ENST00000551752 Q6ZUT4 128 aa5.45□□□□□ -1.54
RBFOX1-213ENST00000551752 ANKRD29Q8N6D5 301 aa5.45□□□□□ -1.54
RBFOX1-213ENST00000551752 CARD19Q96LW7 228 aa5.45□□□□□ -1.54
RBFOX1-213ENST00000551752 LITAFQ99732 161 aa5.45□□□□□ -1.54
RBFOX1-213ENST00000551752 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.44□□□□□ -1.54
RBFOX1-213ENST00000551752 IGKV2-29A2NJV5 120 aaPredicted RBP5.44□□□□□ -1.54
RBFOX1-213ENST00000551752 LRCOL1A6NCL2 159 aa5.44□□□□□ -1.54
RBFOX1-213ENST00000551752 C9JAW5 83 aa5.44□□□□□ -1.54
RBFOX1-213ENST00000551752 TMEM262E9PQX1 116 aa5.44□□□□□ -1.54
RBFOX1-213ENST00000551752 NDUFA1O15239 70 aa5.44□□□□□ -1.54
RBFOX1-213ENST00000551752 SLC25A20O43772 301 aa5.44□□□□□ -1.54
RBFOX1-213ENST00000551752 LINC01620Q4KN68 170 aa5.44□□□□□ -1.54
RBFOX1-213ENST00000551752 RMI2Q96E14 147 aa5.44□□□□□ -1.54
RBFOX1-213ENST00000551752 DYNC1H1Q14204 4646 aaKnown RBP5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 A0A1B0GV72 72 aa5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 H7C2G1 150 aa5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 COX6CP09669 75 aa5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 SPINK8P0C7L1 97 aa5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 HERVK_113P63121 156 aa5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 GAGE5Q13069 117 aa5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 FAM19A3Q7Z5A8 133 aa5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 DAZ4Q86SG3 579 aaKnown RBP5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 COPS9Q8WXC6 57 aa5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 DAZ3Q9NR90 486 aaKnown RBP5.43□□□□□ -1.54
RBFOX1-213ENST00000551752 LRP1BQ9NZR2 4599 aa5.42□□□□□ -1.54
RBFOX1-213ENST00000551752 TRBV6-8A0A0A6YYG3 113 aa5.42□□□□□ -1.54
RBFOX1-213ENST00000551752 TRBV10-2A0A0K0K1G8 114 aa5.42□□□□□ -1.54
RBFOX1-213ENST00000551752 PSCAO43653 123 aa5.42□□□□□ -1.54
RBFOX1-213ENST00000551752 CIRBPQ14011 172 aaKnown RBP5.42□□□□□ -1.54
RBFOX1-213ENST00000551752 RNASE13Q5GAN3 156 aaKnown RBP5.42□□□□□ -1.54
RBFOX1-213ENST00000551752 CSDC2Q9Y534 153 aaKnown RBP5.42□□□□□ -1.54
RBFOX1-213ENST00000551752 H3BT86 120 aa5.41□□□□□ -1.54
RBFOX1-213ENST00000551752 RPL13AP40429 203 aaKnown RBP5.41□□□□□ -1.54
RBFOX1-213ENST00000551752 ADAMTSL4-AS1Q5T5F5 129 aa5.41□□□□□ -1.54
RBFOX1-213ENST00000551752 Q8N814 137 aa5.41□□□□□ -1.54
RBFOX1-213ENST00000551752 PPDPFQ9H3Y8 114 aa5.41□□□□□ -1.54
RBFOX1-213ENST00000551752 Q9UF83 564 aa5.41□□□□□ -1.54
RBFOX1-213ENST00000551752 CDKN2A-AS1Q9UH64 79 aa5.41□□□□□ -1.54
RBFOX1-213ENST00000551752 RYR1P21817 5038 aa5.41□□□□□ -1.54
RBFOX1-213ENST00000551752 DNAH5Q8TE73 4624 aa5.4□□□□□ -1.54
RBFOX1-213ENST00000551752 MT3P25713 68 aa5.4□□□□□ -1.54
RBFOX1-213ENST00000551752 TMEM101Q96IK0 257 aa5.4□□□□□ -1.54
RBFOX1-213ENST00000551752 USP17L23D6RBM5 183 aa5.39□□□□□ -1.55
RBFOX1-213ENST00000551752 H7C423 109 aa5.39□□□□□ -1.55
RBFOX1-213ENST00000551752 MT-ATP8P03928 68 aa5.39□□□□□ -1.55
RBFOX1-213ENST00000551752 XGP55808 180 aa5.39□□□□□ -1.55
RBFOX1-213ENST00000551752 CKS1BP61024 79 aa5.39□□□□□ -1.55
RBFOX1-213ENST00000551752 LINC00242Q5T6M2 205 aa5.39□□□□□ -1.55
RBFOX1-213ENST00000551752 UBE2WQ96B02 151 aa5.39□□□□□ -1.55
RBFOX1-213ENST00000551752 TRAV8-4A0A0B4J246 113 aa5.38□□□□□ -1.55
RBFOX1-213ENST00000551752 LST1O00453 97 aa5.38□□□□□ -1.55
RBFOX1-213ENST00000551752 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
RBFOX1-213ENST00000551752 HERV-K104P63124 156 aa5.38□□□□□ -1.55
RBFOX1-213ENST00000551752 C14orf177Q52M58 125 aa5.38□□□□□ -1.55
RBFOX1-213ENST00000551752 C2orf82Q6UX34 121 aa5.38□□□□□ -1.55
RBFOX1-213ENST00000551752 TMEM243Q9BU79 118 aa5.38□□□□□ -1.55
RBFOX1-213ENST00000551752 PRR34Q9NV39 138 aa5.38□□□□□ -1.55
RBFOX1-213ENST00000551752 SMIM1B2RUZ4 78 aa5.37□□□□□ -1.55
RBFOX1-213ENST00000551752 KRTAP10-1P60331 282 aa5.37□□□□□ -1.55
RBFOX1-213ENST00000551752 COX6A2Q02221 97 aa5.37□□□□□ -1.55
RBFOX1-213ENST00000551752 Q6ZSA8 131 aa5.37□□□□□ -1.55
RBFOX1-213ENST00000551752 LINC00308Q8TCZ7 52 aa5.37□□□□□ -1.55
RBFOX1-213ENST00000551752 Q9HAA7 133 aa5.37□□□□□ -1.55
RBFOX1-213ENST00000551752 HSPG2P98160 4391 aa5.37□□□□□ -1.55
RBFOX1-213ENST00000551752 EPM2AB3EWF7 344 aa5.36□□□□□ -1.55
RBFOX1-213ENST00000551752 UBE2L6O14933 153 aa5.36□□□□□ -1.55
RBFOX1-213ENST00000551752 NPC2P61916 151 aa5.36□□□□□ -1.55
RBFOX1-213ENST00000551752 MEIG1Q5JSS6 88 aa5.36□□□□□ -1.55
RBFOX1-213ENST00000551752 NTM-AS1Q6ZSK4 140 aa5.36□□□□□ -1.55
RBFOX1-213ENST00000551752 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
RBFOX1-213ENST00000551752 CDC42SE2Q9NRR3 84 aa5.36□□□□□ -1.55
RBFOX1-213ENST00000551752 KLK12Q9UKR0 248 aa5.36□□□□□ -1.55
RBFOX1-213ENST00000551752 FAM240AA0A1B0GVK7 77 aa5.35□□□□□ -1.55
RBFOX1-213ENST00000551752 COX7A2LO14548 114 aa5.35□□□□□ -1.55
RBFOX1-213ENST00000551752 Q6Q795 121 aa5.35□□□□□ -1.55
RBFOX1-213ENST00000551752 ENHOQ6UWT2 76 aa5.35□□□□□ -1.55
RBFOX1-213ENST00000551752 CLEC2BQ92478 149 aa5.35□□□□□ -1.55
RBFOX1-213ENST00000551752 APOBP04114 4563 aaKnown RBP5.35□□□□□ -1.55
RBFOX1-213ENST00000551752 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
RBFOX1-213ENST00000551752 IGKV2D-24A0A075B6R9 120 aa5.34□□□□□ -1.55
RBFOX1-213ENST00000551752 TRAV13-1A0A0B4J241 112 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms