RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 SAA2P0DJI9 122 aaPredicted RBP-1.06□□□□□ -2.58
SCAF11-215ENST00000551391 RPL13AP3Q6NVV1 102 aa-1.06□□□□□ -2.58
SCAF11-215ENST00000551391 HEPN1Q6WQI6 88 aa-1.06□□□□□ -2.58
SCAF11-215ENST00000551391 WFDC13Q8IUB5 93 aa-1.06□□□□□ -2.58
SCAF11-215ENST00000551391 HIGD1BQ9P298 99 aa-1.06□□□□□ -2.58
SCAF11-215ENST00000551391 DNHD1Q96M86 4753 aa-1.06□□□□□ -2.58
SCAF11-215ENST00000551391 DYNC1H1Q14204 4646 aaKnown RBP-1.06□□□□□ -2.58
SCAF11-215ENST00000551391 ANKRD50Q9ULJ7 1429 aa-1.06□□□□□ -2.58
SCAF11-215ENST00000551391 NRKQ7Z2Y5 1582 aa-1.07□□□□□ -2.58
SCAF11-215ENST00000551391 TEP1Q99973 2627 aaKnown RBP-1.07□□□□□ -2.58
SCAF11-215ENST00000551391 TRAV30A0A087WSZ9 112 aa-1.07□□□□□ -2.58
SCAF11-215ENST00000551391 A0A1B0GU69 56 aa-1.07□□□□□ -2.58
SCAF11-215ENST00000551391 LELP1Q5T871 98 aa-1.07□□□□□ -2.58
SCAF11-215ENST00000551391 C12orf57Q99622 126 aa-1.07□□□□□ -2.58
SCAF11-215ENST00000551391 CLIP1P30622 1438 aa-1.07□□□□□ -2.58
SCAF11-215ENST00000551391 FASNP49327 2511 aaKnown RBP-1.08□□□□□ -2.58
SCAF11-215ENST00000551391 MAPKBP1O60336 1514 aa-1.08□□□□□ -2.58
SCAF11-215ENST00000551391 ARHGAP5Q13017 1502 aa-1.08□□□□□ -2.58
SCAF11-215ENST00000551391 SACSQ9NZJ4 4579 aa-1.08□□□□□ -2.58
SCAF11-215ENST00000551391 MYO18BQ8IUG5 2567 aa-1.08□□□□□ -2.58
SCAF11-215ENST00000551391 SVBPQ8N300 66 aa-1.08□□□□□ -2.58
SCAF11-215ENST00000551391 NLRP1Q9C000 1473 aa-1.08□□□□□ -2.58
SCAF11-215ENST00000551391 PAPPA2Q9BXP8 1791 aa-1.08□□□□□ -2.58
SCAF11-215ENST00000551391 SNCAP37840 140 aa-1.09□□□□□ -2.58
SCAF11-215ENST00000551391 GNG4P50150 75 aa-1.09□□□□□ -2.58
SCAF11-215ENST00000551391 SFTA2Q6UW10 78 aa-1.09□□□□□ -2.58
SCAF11-215ENST00000551391 C6orf201Q7Z4U5 140 aa-1.09□□□□□ -2.58
SCAF11-215ENST00000551391 EFCAB10A6NFE3 127 aa-1.1□□□□□ -2.59
SCAF11-215ENST00000551391 H3BQ15 152 aa-1.1□□□□□ -2.59
SCAF11-215ENST00000551391 EIF4G3O43432 1585 aaKnown RBP-1.1□□□□□ -2.59
SCAF11-215ENST00000551391 DNAH1Q9P2D7 4330 aa-1.11□□□□□ -2.59
SCAF11-215ENST00000551391 DMXL1Q9Y485 3027 aa-1.11□□□□□ -2.59
SCAF11-215ENST00000551391 A0A0G2JND7 137 aa-1.11□□□□□ -2.59
SCAF11-215ENST00000551391 DLEU1O43261 78 aa-1.11□□□□□ -2.59
SCAF11-215ENST00000551391 REV3LO60673 3130 aa-1.11□□□□□ -2.59
SCAF11-215ENST00000551391 SPHKAPQ2M3C7 1700 aa-1.12□□□□□ -2.59
SCAF11-215ENST00000551391 SPTY2D1-AS1A0A0U1RR47 76 aa-1.12□□□□□ -2.59
SCAF11-215ENST00000551391 H3BQF6 201 aa-1.12□□□□□ -2.59
SCAF11-215ENST00000551391 K7EP34 96 aa-1.12□□□□□ -2.59
SCAF11-215ENST00000551391 PPP3R1P63098 170 aa-1.12□□□□□ -2.59
SCAF11-215ENST00000551391 MAP3K1Q13233 1512 aa-1.12□□□□□ -2.59
SCAF11-215ENST00000551391 CMYA5Q8N3K9 4069 aa-1.12□□□□□ -2.59
SCAF11-215ENST00000551391 MARF1Q9Y4F3 1742 aaKnown RBP-1.12□□□□□ -2.59
SCAF11-215ENST00000551391 DNAH7Q8WXX0 4024 aa-1.12□□□□□ -2.59
SCAF11-215ENST00000551391 WDR87Q6ZQQ6 2873 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 ANKRD11Q6UB99 2663 aaPredicted RBP-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 A0A087WVE0 104 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 CRYM-AS1A6NIL9 109 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 H0Y9P7 68 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 H0YAA0 97 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 CORTO00230 105 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 ARMS2P0C7Q2 107 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 DEFB1P60022 68 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 KRTAP19-5Q3LI72 72 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 COX6B2Q6YFQ2 88 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 KALRNO60229 2985 aa-1.13□□□□□ -2.59
SCAF11-215ENST00000551391 CHD1O14646 1710 aa-1.14□□□□□ -2.59
SCAF11-215ENST00000551391 TRBV7-7A0A0K0K1E9 115 aa-1.14□□□□□ -2.59
SCAF11-215ENST00000551391 A0A1B0GV90 55 aa-1.14□□□□□ -2.59
SCAF11-215ENST00000551391 NMSQ5H8A3 153 aa-1.14□□□□□ -2.59
SCAF11-215ENST00000551391 S4R3F8 94 aa-1.14□□□□□ -2.59
SCAF11-215ENST00000551391 TOPAZ1Q8N9V7 1692 aa-1.14□□□□□ -2.59
SCAF11-215ENST00000551391 LRRC37AA6NMS7 1700 aa-1.15□□□□□ -2.59
SCAF11-215ENST00000551391 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.15□□□□□ -2.59
SCAF11-215ENST00000551391 PZPP20742 1482 aa-1.15□□□□□ -2.59
SCAF11-215ENST00000551391 KRTDAPP60985 99 aa-1.15□□□□□ -2.59
SCAF11-215ENST00000551391 CGREF1Q99674 301 aa-1.15□□□□□ -2.59
SCAF11-215ENST00000551391 RELNP78509 3460 aa-1.15□□□□□ -2.59
SCAF11-215ENST00000551391 CC2D2AQ9P2K1 1620 aa-1.15□□□□□ -2.59
SCAF11-215ENST00000551391 TRANK1O15050 2925 aa-1.16□□□□□ -2.59
SCAF11-215ENST00000551391 COL12A1Q99715 3063 aa-1.16□□□□□ -2.59
SCAF11-215ENST00000551391 DNAH8Q96JB1 4490 aa-1.16□□□□□ -2.6
SCAF11-215ENST00000551391 C7orf77A4D0Y5 90 aa-1.16□□□□□ -2.6
SCAF11-215ENST00000551391 H7BZZ5 65 aa-1.16□□□□□ -2.6
SCAF11-215ENST00000551391 GNGT1P63211 74 aa-1.16□□□□□ -2.6
SCAF11-215ENST00000551391 MT1XP80297 61 aa-1.16□□□□□ -2.6
SCAF11-215ENST00000551391 DEFB107AQ8IZN7 70 aa-1.16□□□□□ -2.6
SCAF11-215ENST00000551391 PSENENQ9NZ42 101 aa-1.16□□□□□ -2.6
SCAF11-215ENST00000551391 KIAA1551Q9HCM1 1747 aa-1.16□□□□□ -2.6
SCAF11-215ENST00000551391 PDCD11Q14690 1871 aaKnown RBP-1.17□□□□□ -2.6
SCAF11-215ENST00000551391 HSD52Q0P140 79 aa-1.17□□□□□ -2.6
SCAF11-215ENST00000551391 DEFB110Q30KQ9 67 aa-1.17□□□□□ -2.6
SCAF11-215ENST00000551391 PSMG4Q5JS54 123 aa-1.17□□□□□ -2.6
SCAF11-215ENST00000551391 VAMP8Q9BV40 100 aa-1.17□□□□□ -2.6
SCAF11-215ENST00000551391 ABCC5O15440 1437 aa-1.17□□□□□ -2.6
SCAF11-215ENST00000551391 CUX1P39880 1505 aa-1.18□□□□□ -2.6
SCAF11-215ENST00000551391 TMEM262E9PQX1 116 aa-1.18□□□□□ -2.6
SCAF11-215ENST00000551391 PRLHP81277 87 aa-1.18□□□□□ -2.6
SCAF11-215ENST00000551391 SAMD9Q5K651 1589 aa-1.18□□□□□ -2.6
SCAF11-215ENST00000551391 TARBP1Q13395 1621 aaKnown RBP-1.18□□□□□ -2.6
SCAF11-215ENST00000551391 RANBP2P49792 3224 aaKnown RBP-1.19□□□□□ -2.6
SCAF11-215ENST00000551391 MGAM2Q2M2H8 2515 aa-1.19□□□□□ -2.6
SCAF11-215ENST00000551391 NDUFA3O95167 84 aa-1.19□□□□□ -2.6
SCAF11-215ENST00000551391 ZZEF1O43149 2961 aa-1.19□□□□□ -2.6
SCAF11-215ENST00000551391 NIPBLQ6KC79 2804 aaeCLIP-1.19□□□□□ -2.6
SCAF11-215ENST00000551391 MT1HL1P0DM35 61 aa-1.2□□□□□ -2.6
SCAF11-215ENST00000551391 S100A1P23297 94 aa-1.2□□□□□ -2.6
SCAF11-215ENST00000551391 AP4S1Q9Y587 144 aa-1.2□□□□□ -2.6
SCAF11-215ENST00000551391 MAGI2Q86UL8 1455 aa-1.2□□□□□ -2.6
SCAF11-215ENST00000551391 SPG11Q96JI7 2443 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms