RNA–Protein interactions for RNA: ENST00000549400.1

PTPRB-207, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 4

Gene PTPRB, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-207ENST00000549400 Q6YL49 198 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 Q6ZRP5 223 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 Q6ZTC4 211 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 CCDC168Q8NDH2 2452 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 KLHL30-AS1Q8NEE0 82 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 SPTSSBQ8NFR3 76 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 LINC00846Q9NV44 126 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 SNURFQ9Y675 71 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 KIF25-AS1Q9Y6Z4 181 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 PKD1L1Q8TDX9 2849 aa2.72□□□□□ -1.97
PTPRB-207ENST00000549400 DNAH3Q8TD57 4116 aa2.71□□□□□ -1.97
PTPRB-207ENST00000549400 NIPBLQ6KC79 2804 aaeCLIP2.71□□□□□ -1.98
PTPRB-207ENST00000549400 TLN2Q9Y4G6 2542 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV4OR15-8A0A075B7B6 117 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 A0A087WW49 117 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 TRAV21A0A0B4J279 112 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 A0A0J9YXY3 114 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 A0A1B0GW54 56 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 IGIPA6NJ69 53 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 C16orf90A8MZG2 172 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 C3orf84H3BNL1 204 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 K7EQG2 157 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 RNASE3P12724 160 aaKnown RBP2.71□□□□□ -1.98
PTPRB-207ENST00000549400 LINC00315P59091 139 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 KRTAP10-9P60411 292 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 TMEM254Q8TBM7 123 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 RHPN1-AS1Q9BWJ2 59 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 UBL5Q9BZL1 73 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 ZNF706Q9Y5V0 76 aaPredicted RBP2.71□□□□□ -1.98
PTPRB-207ENST00000549400 STAB1Q9NY15 2570 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 OTOGQ6ZRI0 2925 aa2.71□□□□□ -1.98
PTPRB-207ENST00000549400 FN1P02751 2386 aaKnown RBP2.71□□□□□ -1.98
PTPRB-207ENST00000549400 CMYA5Q8N3K9 4069 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 TRBV6-8A0A0A6YYG3 113 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV3-35A0A0C4DH35 117 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 TRBV6-5A0A0K0K1A5 114 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 CHKB-CPT1BH3BT56 60 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 LY6EQ16553 131 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 C9orf116Q5BN46 136 aaPredicted RBP2.7□□□□□ -1.98
PTPRB-207ENST00000549400 C18orf65Q6ZTR6 163 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 LINC00467Q9BRT7 94 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 MSRB1Q9NZV6 116 aa2.7□□□□□ -1.98
PTPRB-207ENST00000549400 DNAH1Q9P2D7 4330 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV3OR16-8A0A075B7F1 116 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV4-28A0A0C4DH34 117 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV3-66A0A0C4DH42 116 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 TRBV7-4A0A0J9YYF1 115 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 KRTAP29-1A8MX34 341 aaPredicted RBP2.69□□□□□ -1.98
PTPRB-207ENST00000549400 JMJD7-PLA2G4BH0Y9G9 81 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 K7EQD1 137 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 GAS8-AS1O95177 125 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 PRB1P04280 392 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 ENHOQ6UWT2 76 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 TMEM61Q8N0U2 210 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 AMELXQ99217 191 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 SMIM2Q9BVW6 85 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 NSD1Q96L73 2696 aaPredicted RBP2.69□□□□□ -1.98
PTPRB-207ENST00000549400 COL6A5A8TX70 2615 aa2.69□□□□□ -1.98
PTPRB-207ENST00000549400 MTORP42345 2549 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV3OR16-13A0A075B7E8 117 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV3-49A0A0A0MS15 119 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV3-74A0A0B4J1X5 117 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 H0YGX0 51 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV3-11P01762 117 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 POLR2KP53803 58 aaKnown RBP2.68□□□□□ -1.98
PTPRB-207ENST00000549400 MIAQ16674 131 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 Q5VV11 94 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 C10orf99Q6UWK7 81 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 C14orf178Q8N769 122 aaPredicted RBP2.68□□□□□ -1.98
PTPRB-207ENST00000549400 C4orf3Q8WVX3 66 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 FAM104AQ969W3 186 aa2.68□□□□□ -1.98
PTPRB-207ENST00000549400 DOPEY2Q9Y3R5 2298 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 MUC4Q99102 2169 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 SONP18583 2426 aaKnown RBP2.67□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV3OR16-12A0A075B7B8 117 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 TRAV12-3A0A0B4J271 114 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV3-16A0A0C4DH30 117 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 PSCAO43653 123 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV4-30-4P0DP06 118 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 Q6ZSN1 163 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 C22orf24Q9Y442 160 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 ANK2Q01484 3957 aa2.67□□□□□ -1.98
PTPRB-207ENST00000549400 IGHV1OR15-1A0A075B7D0 117 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 TRAV10A0A0B4J240 114 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 A6NED7 52 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 PRB4P10163 310 aaPredicted RBP2.66□□□□□ -1.98
PTPRB-207ENST00000549400 ELOF1P60002 83 aaKnown RBP2.66□□□□□ -1.98
PTPRB-207ENST00000549400 DEFB1P60022 68 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 NANOS2P60321 138 aaKnown RBP2.66□□□□□ -1.98
PTPRB-207ENST00000549400 REG3AQ06141 175 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 NREPQ16612 68 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 C2orf66Q6UXQ4 117 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 C1orf64Q8NEQ6 169 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 C14orf132Q9NPU4 83 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 UBR4Q5T4S7 5183 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 ACANP16112 2415 aa2.66□□□□□ -1.98
PTPRB-207ENST00000549400 DYNC2H1Q8NCM8 4307 aaKnown RBP2.65□□□□□ -1.98
PTPRB-207ENST00000549400 IGLV4-69A0A075B6H9 119 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 DNAJC9-AS1A6NH13 148 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms