RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 SMCR5Q8TEV8 140 aa6.88□□□□□ -1.31
TRAF1-203ENST00000546084 IGLV1-51P01701 117 aa6.88□□□□□ -1.31
TRAF1-203ENST00000546084 UNQ6190/PRO20217Q6UXQ8 127 aa6.88□□□□□ -1.31
TRAF1-203ENST00000546084 IGLV5-39A0A0G2JS06 123 aa6.88□□□□□ -1.31
TRAF1-203ENST00000546084 GHRHP01286 108 aa6.88□□□□□ -1.31
TRAF1-203ENST00000546084 LINC00337Q8N6G1 96 aa6.88□□□□□ -1.31
TRAF1-203ENST00000546084 KMT2BQ9UMN6 2715 aaPredicted RBP6.88□□□□□ -1.31
TRAF1-203ENST00000546084 TRBV7-7A0A0K0K1E9 115 aa6.87□□□□□ -1.31
TRAF1-203ENST00000546084 C6orf99Q4VX62 202 aa6.87□□□□□ -1.31
TRAF1-203ENST00000546084 VPREB1P12018 145 aa6.87□□□□□ -1.31
TRAF1-203ENST00000546084 APOC4P55056 127 aa6.87□□□□□ -1.31
TRAF1-203ENST00000546084 A0A087WVE0 104 aa6.87□□□□□ -1.31
TRAF1-203ENST00000546084 H3BS24 57 aa6.87□□□□□ -1.31
TRAF1-203ENST00000546084 SPART-AS1P0CW21 52 aa6.87□□□□□ -1.31
TRAF1-203ENST00000546084 IGLV5-45A0A087WSX0 123 aa6.86□□□□□ -1.31
TRAF1-203ENST00000546084 CAMK2N2Q96S95 79 aa6.86□□□□□ -1.31
TRAF1-203ENST00000546084 SERP1Q9Y6X1 66 aa6.86□□□□□ -1.31
TRAF1-203ENST00000546084 TRBV6-4A0A1B0GX49 114 aa6.86□□□□□ -1.31
TRAF1-203ENST00000546084 CRYGAP11844 174 aa6.86□□□□□ -1.31
TRAF1-203ENST00000546084 CD164Q04900 197 aa6.86□□□□□ -1.31
TRAF1-203ENST00000546084 BEAN1Q3B7T3 259 aa6.86□□□□□ -1.31
TRAF1-203ENST00000546084 CELA1Q9UNI1 258 aa6.86□□□□□ -1.31
TRAF1-203ENST00000546084 HILS1P60008 231 aa6.86□□□□□ -1.31
TRAF1-203ENST00000546084 TRAV23DV6A0A075B6W5 121 aa6.85□□□□□ -1.31
TRAF1-203ENST00000546084 CXCL5P42830 114 aa6.85□□□□□ -1.31
TRAF1-203ENST00000546084 C9orf66Q5T8R8 295 aa6.85□□□□□ -1.31
TRAF1-203ENST00000546084 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
TRAF1-203ENST00000546084 ORMDL1Q9P0S3 153 aa6.84□□□□□ -1.31
TRAF1-203ENST00000546084 OVOL2Q9BRP0 275 aa6.84□□□□□ -1.32
TRAF1-203ENST00000546084 GIG44P09565 113 aaPredicted RBP6.83□□□□□ -1.32
TRAF1-203ENST00000546084 IGHV4-30-4P0DP06 118 aa6.83□□□□□ -1.32
TRAF1-203ENST00000546084 IGKV2-28A0A075B6P5 120 aa6.83□□□□□ -1.32
TRAF1-203ENST00000546084 IGKV2D-28P01615 120 aa6.83□□□□□ -1.32
TRAF1-203ENST00000546084 LINC01600Q96MT4 127 aa6.83□□□□□ -1.32
TRAF1-203ENST00000546084 PKD1L1Q8TDX9 2849 aa6.82□□□□□ -1.32
TRAF1-203ENST00000546084 H0YGX0 51 aa6.82□□□□□ -1.32
TRAF1-203ENST00000546084 RPL28P46779 137 aaKnown RBP6.82□□□□□ -1.32
TRAF1-203ENST00000546084 FSHBP01225 129 aa6.81□□□□□ -1.32
TRAF1-203ENST00000546084 NANOS2P60321 138 aaKnown RBP6.81□□□□□ -1.32
TRAF1-203ENST00000546084 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
TRAF1-203ENST00000546084 CYSRT1A8MQ03 144 aa6.8□□□□□ -1.32
TRAF1-203ENST00000546084 C10orf25Q5T742 122 aa6.8□□□□□ -1.32
TRAF1-203ENST00000546084 LINC00846Q9NV44 126 aa6.8□□□□□ -1.32
TRAF1-203ENST00000546084 SNURFQ9Y675 71 aa6.8□□□□□ -1.32
TRAF1-203ENST00000546084 IGKV2-24A0A0C4DH68 120 aa6.8□□□□□ -1.32
TRAF1-203ENST00000546084 KRTAP1-3Q8IUG1 177 aa6.8□□□□□ -1.32
TRAF1-203ENST00000546084 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
TRAF1-203ENST00000546084 KRTAP10-3P60369 221 aa6.79□□□□□ -1.32
TRAF1-203ENST00000546084 Q6ZTC4 211 aa6.79□□□□□ -1.32
TRAF1-203ENST00000546084 A0A096LNI7 61 aa6.79□□□□□ -1.32
TRAF1-203ENST00000546084 Q6ZQY7 126 aa6.79□□□□□ -1.32
TRAF1-203ENST00000546084 STAB2Q8WWQ8 2551 aa6.79□□□□□ -1.32
TRAF1-203ENST00000546084 WFDC10BQ8IUB3 73 aa6.78□□□□□ -1.32
TRAF1-203ENST00000546084 IBA57-AS1B1ANH7 110 aa6.78□□□□□ -1.32
TRAF1-203ENST00000546084 NKAPP1Q8N9T2 125 aa6.78□□□□□ -1.32
TRAF1-203ENST00000546084 RPL37AP8A6NKH3 93 aa6.78□□□□□ -1.32
TRAF1-203ENST00000546084 PSCAO43653 123 aa6.78□□□□□ -1.32
TRAF1-203ENST00000546084 KPRPQ5T749 579 aaPredicted RBP6.78□□□□□ -1.32
TRAF1-203ENST00000546084 Q5XG85 94 aa6.78□□□□□ -1.32
TRAF1-203ENST00000546084 A0A087WZ39 114 aa6.77□□□□□ -1.33
TRAF1-203ENST00000546084 ENHOQ6UWT2 76 aa6.77□□□□□ -1.33
TRAF1-203ENST00000546084 UBL5Q9BZL1 73 aa6.77□□□□□ -1.33
TRAF1-203ENST00000546084 ZNF469Q96JG9 3925 aaPredicted RBP6.77□□□□□ -1.33
TRAF1-203ENST00000546084 UBE2DNLQ8IWF7 75 aa6.76□□□□□ -1.33
TRAF1-203ENST00000546084 TENM3Q9P273 2699 aa6.76□□□□□ -1.33
TRAF1-203ENST00000546084 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.76□□□□□ -1.33
TRAF1-203ENST00000546084 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
TRAF1-203ENST00000546084 LRCOL1A6NCL2 159 aa6.76□□□□□ -1.33
TRAF1-203ENST00000546084 F8WEM9 126 aa6.76□□□□□ -1.33
TRAF1-203ENST00000546084 X6R8D5 127 aa6.76□□□□□ -1.33
TRAF1-203ENST00000546084 DEFB131BA0A096LNP1 70 aa6.75□□□□□ -1.33
TRAF1-203ENST00000546084 PLAC8L1A1L4L8 177 aa6.75□□□□□ -1.33
TRAF1-203ENST00000546084 CD164L2Q6UWJ8 174 aa6.75□□□□□ -1.33
TRAF1-203ENST00000546084 C22orf24Q9Y442 160 aa6.75□□□□□ -1.33
TRAF1-203ENST00000546084 C3orf84H3BNL1 204 aa6.74□□□□□ -1.33
TRAF1-203ENST00000546084 TRBV7-6A0A0J9YX20 115 aa6.74□□□□□ -1.33
TRAF1-203ENST00000546084 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
TRAF1-203ENST00000546084 TRBV10-3A0A0K0K1G6 114 aa6.73□□□□□ -1.33
TRAF1-203ENST00000546084 C11orf45Q8TAV5 145 aa6.73□□□□□ -1.33
TRAF1-203ENST00000546084 C19orf73Q9NVV2 129 aa6.73□□□□□ -1.33
TRAF1-203ENST00000546084 FUSP35637 526 aaKnown RBP eCLIP6.73□□□□□ -1.33
TRAF1-203ENST00000546084 LYRM9A8MSI8 78 aa6.72□□□□□ -1.33
TRAF1-203ENST00000546084 UBE2BP63146 152 aa6.72□□□□□ -1.33
TRAF1-203ENST00000546084 Q6JHZ5 121 aa6.72□□□□□ -1.33
TRAF1-203ENST00000546084 CSNK1G2-AS1Q8NCQ2 148 aa6.72□□□□□ -1.33
TRAF1-203ENST00000546084 PSPHP1O15172 72 aa6.72□□□□□ -1.33
TRAF1-203ENST00000546084 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
TRAF1-203ENST00000546084 FAM19A3Q7Z5A8 133 aa6.72□□□□□ -1.33
TRAF1-203ENST00000546084 FAM19A1Q7Z5A9 133 aa6.72□□□□□ -1.33
TRAF1-203ENST00000546084 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.33
TRAF1-203ENST00000546084 TMEM256-PLSCR3K7ERE1 68 aa6.71□□□□□ -1.33
TRAF1-203ENST00000546084 KRTAP1-1Q07627 177 aa6.71□□□□□ -1.33
TRAF1-203ENST00000546084 DIRC1Q969H9 104 aa6.71□□□□□ -1.34
TRAF1-203ENST00000546084 CCKP06307 115 aa6.7□□□□□ -1.34
TRAF1-203ENST00000546084 Q8N9L7 120 aa6.7□□□□□ -1.34
TRAF1-203ENST00000546084 Q8IZM0 81 aa6.7□□□□□ -1.34
TRAF1-203ENST00000546084 Q8N814 137 aa6.7□□□□□ -1.34
TRAF1-203ENST00000546084 MDFIQ99750 246 aa6.69□□□□□ -1.34
TRAF1-203ENST00000546084 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
TRAF1-203ENST00000546084 TRRAPQ9Y4A5 3859 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms