RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 CSDC2Q9Y534 153 aaKnown RBP9.78□□□□□ -0.84
RPS6KC1-206ENST00000543354 Q8N9L7 120 aa9.78□□□□□ -0.84
RPS6KC1-206ENST00000543354 MIFP14174 115 aa9.77□□□□□ -0.84
RPS6KC1-206ENST00000543354 KPRPQ5T749 579 aaPredicted RBP9.77□□□□□ -0.85
RPS6KC1-206ENST00000543354 SMR3AQ99954 134 aa9.77□□□□□ -0.85
RPS6KC1-206ENST00000543354 KIR2DL5BQ8NHK3 375 aa9.77□□□□□ -0.85
RPS6KC1-206ENST00000543354 IGLV5-39A0A0G2JS06 123 aa9.76□□□□□ -0.85
RPS6KC1-206ENST00000543354 SBSPONQ8IVN8 264 aa9.76□□□□□ -0.85
RPS6KC1-206ENST00000543354 C11orf72Q8NBR9 251 aa9.76□□□□□ -0.85
RPS6KC1-206ENST00000543354 FAM19A4Q96LR4 140 aa9.76□□□□□ -0.85
RPS6KC1-206ENST00000543354 LAMA5O15230 3695 aa9.75□□□□□ -0.85
RPS6KC1-206ENST00000543354 TRAV7A0A075B6U4 112 aa9.75□□□□□ -0.85
RPS6KC1-206ENST00000543354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.75□□□□□ -0.85
RPS6KC1-206ENST00000543354 COL27A1Q8IZC6 1860 aaPredicted RBP9.74□□□□□ -0.85
RPS6KC1-206ENST00000543354 IGHV3OR16-9A0A0B4J2B5 98 aa9.74□□□□□ -0.85
RPS6KC1-206ENST00000543354 IGKV4-1P06312 121 aa9.74□□□□□ -0.85
RPS6KC1-206ENST00000543354 LELP1Q5T871 98 aa9.74□□□□□ -0.85
RPS6KC1-206ENST00000543354 ZNF575Q86XF7 245 aa9.74□□□□□ -0.85
RPS6KC1-206ENST00000543354 M0R378 163 aa9.73□□□□□ -0.85
RPS6KC1-206ENST00000543354 NHLRC4P0CG21 123 aaPredicted RBP9.73□□□□□ -0.85
RPS6KC1-206ENST00000543354 TEP1Q99973 2627 aaKnown RBP9.73□□□□□ -0.85
RPS6KC1-206ENST00000543354 UNC79Q9P2D8 2635 aa9.73□□□□□ -0.85
RPS6KC1-206ENST00000543354 SMIM26A0A096LP01 95 aa9.73□□□□□ -0.85
RPS6KC1-206ENST00000543354 Q6ZVQ6 151 aa9.73□□□□□ -0.85
RPS6KC1-206ENST00000543354 COX17Q14061 63 aa9.72□□□□□ -0.85
RPS6KC1-206ENST00000543354 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
RPS6KC1-206ENST00000543354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.72□□□□□ -0.85
RPS6KC1-206ENST00000543354 TEX15Q9BXT5 2789 aa9.71□□□□□ -0.86
RPS6KC1-206ENST00000543354 CHKB-CPT1BH3BT56 60 aa9.71□□□□□ -0.86
RPS6KC1-206ENST00000543354 IGLV1-51P01701 117 aa9.71□□□□□ -0.86
RPS6KC1-206ENST00000543354 NDUFC1O43677 76 aa9.71□□□□□ -0.86
RPS6KC1-206ENST00000543354 BRI3O95415 125 aa9.7□□□□□ -0.86
RPS6KC1-206ENST00000543354 NBEAL1Q6ZS30 2694 aa9.7□□□□□ -0.86
RPS6KC1-206ENST00000543354 LINC00575Q6W349 94 aa9.7□□□□□ -0.86
RPS6KC1-206ENST00000543354 LITAFQ99732 161 aa9.7□□□□□ -0.86
RPS6KC1-206ENST00000543354 DEFB116Q30KQ4 102 aa9.7□□□□□ -0.86
RPS6KC1-206ENST00000543354 SPENQ96T58 3664 aaKnown RBP9.69□□□□□ -0.86
RPS6KC1-206ENST00000543354 LINC01547P58512 204 aaPredicted RBP9.69□□□□□ -0.86
RPS6KC1-206ENST00000543354 RETNQ9HD89 108 aa9.69□□□□□ -0.86
RPS6KC1-206ENST00000543354 C4orf26Q17RF5 130 aa9.67□□□□□ -0.86
RPS6KC1-206ENST00000543354 SMCR5Q8TEV8 140 aa9.67□□□□□ -0.86
RPS6KC1-206ENST00000543354 SERP1Q9Y6X1 66 aa9.67□□□□□ -0.86
RPS6KC1-206ENST00000543354 MUC7Q8TAX7 377 aa9.66□□□□□ -0.86
RPS6KC1-206ENST00000543354 COL6A5A8TX70 2615 aa9.66□□□□□ -0.86
RPS6KC1-206ENST00000543354 IGHV4-30-4P0DP06 118 aa9.66□□□□□ -0.86
RPS6KC1-206ENST00000543354 V9GYY9 64 aa9.66□□□□□ -0.86
RPS6KC1-206ENST00000543354 PSPHP1O15172 72 aa9.66□□□□□ -0.86
RPS6KC1-206ENST00000543354 C1orf137Q5JT78 98 aa9.65□□□□□ -0.86
RPS6KC1-206ENST00000543354 TMEM254Q8TBM7 123 aa9.65□□□□□ -0.86
RPS6KC1-206ENST00000543354 LINC00208Q96KT6 92 aa9.65□□□□□ -0.86
RPS6KC1-206ENST00000543354 SPINK6Q6UWN8 80 aa9.65□□□□□ -0.87
RPS6KC1-206ENST00000543354 ITPR1Q14643 2758 aa9.64□□□□□ -0.87
RPS6KC1-206ENST00000543354 C1orf195Q5TG92 126 aa9.64□□□□□ -0.87
RPS6KC1-206ENST00000543354 IGLV5-45A0A087WSX0 123 aa9.64□□□□□ -0.87
RPS6KC1-206ENST00000543354 UBR5O95071 2799 aaPredicted RBP9.64□□□□□ -0.87
RPS6KC1-206ENST00000543354 CRYGAP11844 174 aa9.63□□□□□ -0.87
RPS6KC1-206ENST00000543354 HELZ2Q9BYK8 2649 aaKnown RBP9.63□□□□□ -0.87
RPS6KC1-206ENST00000543354 C10orf25Q5T742 122 aa9.63□□□□□ -0.87
RPS6KC1-206ENST00000543354 COL12A1Q99715 3063 aa9.62□□□□□ -0.87
RPS6KC1-206ENST00000543354 A0A1B0GUV1 79 aa9.62□□□□□ -0.87
RPS6KC1-206ENST00000543354 LY6G6DO95868 133 aa9.62□□□□□ -0.87
RPS6KC1-206ENST00000543354 Q6ZTC4 211 aa9.62□□□□□ -0.87
RPS6KC1-206ENST00000543354 A6NED7 52 aa9.61□□□□□ -0.87
RPS6KC1-206ENST00000543354 EGFEM1PQ0D2K5 195 aa9.61□□□□□ -0.87
RPS6KC1-206ENST00000543354 B9D2Q9BPU9 175 aa9.61□□□□□ -0.87
RPS6KC1-206ENST00000543354 PRYO14603 147 aa9.61□□□□□ -0.87
RPS6KC1-206ENST00000543354 DHRS4-AS1Q9P1J3 65 aa9.6□□□□□ -0.87
RPS6KC1-206ENST00000543354 SVEP1Q4LDE5 3571 aa9.6□□□□□ -0.87
RPS6KC1-206ENST00000543354 ATP5EP56381 51 aaPredicted RBP9.59□□□□□ -0.87
RPS6KC1-206ENST00000543354 Q6ZRU5 148 aa9.59□□□□□ -0.87
RPS6KC1-206ENST00000543354 TRBV7-6A0A0J9YX20 115 aa9.58□□□□□ -0.88
RPS6KC1-206ENST00000543354 SPATA3Q8NHX4 192 aa9.58□□□□□ -0.88
RPS6KC1-206ENST00000543354 MRPL55Q7Z7F7 128 aaKnown RBP9.57□□□□□ -0.88
RPS6KC1-206ENST00000543354 RELNP78509 3460 aa9.57□□□□□ -0.88
RPS6KC1-206ENST00000543354 A0A087WSZ3 146 aa9.56□□□□□ -0.88
RPS6KC1-206ENST00000543354 IGLV9-49A0A0B4J1Y8 123 aa9.56□□□□□ -0.88
RPS6KC1-206ENST00000543354 TRAV10A0A0B4J240 114 aa9.56□□□□□ -0.88
RPS6KC1-206ENST00000543354 FLNCQ14315 2725 aa9.55□□□□□ -0.88
RPS6KC1-206ENST00000543354 M0R2N4 97 aa9.54□□□□□ -0.88
RPS6KC1-206ENST00000543354 PMAIP1Q13794 54 aa9.54□□□□□ -0.88
RPS6KC1-206ENST00000543354 TM2D3Q9BRN9 247 aa9.53□□□□□ -0.88
RPS6KC1-206ENST00000543354 STAB1Q9NY15 2570 aa9.53□□□□□ -0.88
RPS6KC1-206ENST00000543354 LYPD5Q6UWN5 251 aa9.53□□□□□ -0.88
RPS6KC1-206ENST00000543354 LINC01561Q8N1V8 128 aa9.53□□□□□ -0.88
RPS6KC1-206ENST00000543354 PCOTHQ58A44 107 aa9.52□□□□□ -0.89
RPS6KC1-206ENST00000543354 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
RPS6KC1-206ENST00000543354 PRLHP81277 87 aa9.5□□□□□ -0.89
RPS6KC1-206ENST00000543354 KIAA0087Q14695 138 aa9.5□□□□□ -0.89
RPS6KC1-206ENST00000543354 SETXQ7Z333 2677 aaKnown RBP9.5□□□□□ -0.89
RPS6KC1-206ENST00000543354 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
RPS6KC1-206ENST00000543354 SMIM29Q86T20 159 aa9.5□□□□□ -0.89
RPS6KC1-206ENST00000543354 ESRGQ1W209 222 aa9.49□□□□□ -0.89
RPS6KC1-206ENST00000543354 PRR15LQ9BU68 103 aa9.49□□□□□ -0.89
RPS6KC1-206ENST00000543354 Q6ZQT0 140 aa9.48□□□□□ -0.89
RPS6KC1-206ENST00000543354 RPS28P62857 69 aaKnown RBP9.47□□□□□ -0.89
RPS6KC1-206ENST00000543354 CXCL6P80162 114 aa9.47□□□□□ -0.89
RPS6KC1-206ENST00000543354 DCHS2Q6V1P9 2916 aa9.47□□□□□ -0.89
RPS6KC1-206ENST00000543354 PLAC8L1A1L4L8 177 aa9.46□□□□□ -0.9
RPS6KC1-206ENST00000543354 KLK9Q2XQG4 91 aa9.46□□□□□ -0.9
RPS6KC1-206ENST00000543354 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms