RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 MYMXA0A1B0GTQ4 84 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 A0A1B0GX51 115 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 M0QY20 66 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 NPYP01303 97 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 CKS2P33552 79 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 FXYD2P54710 66 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 HERVK_113P61574 105 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 WFDC2Q14508 124 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 C5orf47Q569G3 176 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 AMN1Q8IY45 258 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 CNFNQ9BYD5 112 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 Q9UF83 564 aa3.55□□□□□ -1.84
CPSF7-220ENST00000541963 IGKV2D-24A0A075B6R9 120 aa3.54□□□□□ -1.84
CPSF7-220ENST00000541963 UBE2L6O14933 153 aa3.54□□□□□ -1.84
CPSF7-220ENST00000541963 CRPP02741 224 aa3.54□□□□□ -1.84
CPSF7-220ENST00000541963 RPL13AP40429 203 aaKnown RBP3.54□□□□□ -1.84
CPSF7-220ENST00000541963 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
CPSF7-220ENST00000541963 ORMDL2Q53FV1 153 aa3.54□□□□□ -1.84
CPSF7-220ENST00000541963 LINC00173Q6ZV60 143 aa3.54□□□□□ -1.84
CPSF7-220ENST00000541963 UBE2WQ96B02 151 aa3.54□□□□□ -1.84
CPSF7-220ENST00000541963 KLK12Q9UKR0 248 aa3.54□□□□□ -1.84
CPSF7-220ENST00000541963 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
CPSF7-220ENST00000541963 PKD1P98161 4303 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 A0A096LNJ9 63 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.53□□□□□ -1.84
CPSF7-220ENST00000541963 D6R8Y8 96 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 F8VRH5 84 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 ANGP03950 147 aaKnown RBP3.53□□□□□ -1.84
CPSF7-220ENST00000541963 IFI27P40305 119 aaPredicted RBP3.53□□□□□ -1.84
CPSF7-220ENST00000541963 UBE2D1P51668 147 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 PMVKQ15126 192 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 Q8N8P6 123 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 OR13C6PQ8NH95 151 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 TMEM243Q9BU79 118 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 HECTD4Q9Y4D8 3996 aa3.53□□□□□ -1.84
CPSF7-220ENST00000541963 IGLV8-61A0A075B6I0 122 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 LRCOL1A6NCL2 159 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 H3BT86 120 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 J3KT08 172 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 NCR2O95944 276 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 MIAQ16674 131 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 NTM-AS1Q6ZSK4 140 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 PCP2Q8IVA1 136 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 Q8N814 137 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 TMEM101Q96IK0 257 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 KIR2DL4Q99706 377 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 C20orf78Q9BR46 151 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 SS18L2Q9UHA2 77 aa3.52□□□□□ -1.85
CPSF7-220ENST00000541963 HERC2O95714 4834 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 TRAV8-4A0A0B4J246 113 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 A0A0B4J2C4 111 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 TRBV7-7A0A0K0K1E9 115 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 I3L3M4 83 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 MT-ATP8P03928 68 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 COX6CP09669 75 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 ATXN8Q156A1 80 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 MRPL51Q4U2R6 128 aaKnown RBP3.51□□□□□ -1.85
CPSF7-220ENST00000541963 TMEM170BQ5T4T1 132 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 ENHOQ6UWT2 76 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 LINC00269Q8N2A0 174 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 SMIM20Q8N5G0 67 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 BAALCQ8WXS3 180 aa3.51□□□□□ -1.85
CPSF7-220ENST00000541963 RYR1P21817 5038 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 TRAV26-2A0A0B4J265 109 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 TRBV6-5A0A0K0K1A5 114 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 SDHAF1A6NFY7 115 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 UQCRQO14949 82 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 SLC25A20O43772 301 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 CXCL5P42830 114 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 SEC61GP60059 68 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 REG3AQ06141 175 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 SCGB1D4Q6XE38 83 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 COPS9Q8WXC6 57 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 RPL39LQ96EH5 51 aaKnown RBP3.5□□□□□ -1.85
CPSF7-220ENST00000541963 PRR34Q9NV39 138 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 PRO1854Q9UHT4 67 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 KIAA1109Q2LD37 5005 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 DNAH5Q8TE73 4624 aa3.5□□□□□ -1.85
CPSF7-220ENST00000541963 LRP1BQ9NZR2 4599 aa3.49□□□□□ -1.85
CPSF7-220ENST00000541963 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.49□□□□□ -1.85
CPSF7-220ENST00000541963 LOC107984156A0A0G2JMH3 177 aa3.49□□□□□ -1.85
CPSF7-220ENST00000541963 FAM168BA1KXE4 195 aa3.49□□□□□ -1.85
CPSF7-220ENST00000541963 K7ERJ3 54 aa3.49□□□□□ -1.85
CPSF7-220ENST00000541963 LECT2O14960 151 aa3.49□□□□□ -1.85
CPSF7-220ENST00000541963 FUSP35637 526 aaKnown RBP eCLIP3.49□□□□□ -1.85
CPSF7-220ENST00000541963 PSMB2P49721 201 aa3.49□□□□□ -1.85
CPSF7-220ENST00000541963 ARL17AQ8IVW1 177 aa3.49□□□□□ -1.85
CPSF7-220ENST00000541963 ANKRD29Q8N6D5 301 aa3.49□□□□□ -1.85
CPSF7-220ENST00000541963 NAA38Q9BRA0 125 aaKnown RBP3.49□□□□□ -1.85
CPSF7-220ENST00000541963 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
CPSF7-220ENST00000541963 TRBV30A0A0K0K1B3 111 aa3.48□□□□□ -1.85
CPSF7-220ENST00000541963 TRBV27A0A0K0K1C4 114 aa3.48□□□□□ -1.85
CPSF7-220ENST00000541963 TRBV10-2A0A0K0K1G8 114 aa3.48□□□□□ -1.85
CPSF7-220ENST00000541963 LOC389332A0A1B0GUA5 103 aa3.48□□□□□ -1.85
CPSF7-220ENST00000541963 ZNF815PA8K554 130 aa3.48□□□□□ -1.85
CPSF7-220ENST00000541963 POLR2KP53803 58 aaKnown RBP3.48□□□□□ -1.85
CPSF7-220ENST00000541963 KRTAP10-1P60331 282 aa3.48□□□□□ -1.85
CPSF7-220ENST00000541963 PRR4Q16378 134 aa3.48□□□□□ -1.85
CPSF7-220ENST00000541963 MEIG1Q5JSS6 88 aa3.48□□□□□ -1.85
CPSF7-220ENST00000541963 CLPSL2Q6UWE3 100 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms