RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ERHP84090 104 aaKnown RBP3.5□□□□□ -1.85
DDB1-219ENST00000541513 RBM3P98179 157 aaKnown RBP3.5□□□□□ -1.85
DDB1-219ENST00000541513 RHOHQ15669 191 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 C2orf83Q53S99 150 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 CYB561D1Q8N8Q1 229 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 C4orf3Q8WVX3 66 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 A0A087WYN8 130 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 PANO1I0J062 215 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 ZNF861PO60384 105 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 PRH1P02810 166 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 IGLV7-43P04211 117 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 DEFA4P12838 97 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 SPINK9Q5DT21 86 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 BAGE3Q86Y29 109 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 BAGE2Q86Y30 109 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 NMES1Q9C002 83 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 CYSTM1Q9H1C7 97 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 DNAH3Q8TD57 4116 aa3.49□□□□□ -1.85
DDB1-219ENST00000541513 TRBV7-1A0A0A6YYK4 115 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 IGHV1-24A0A0C4DH33 117 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 H3BPC8 53 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 I3L2K1 104 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 K7EIM0 57 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 RPL28P46779 137 aaKnown RBP3.48□□□□□ -1.85
DDB1-219ENST00000541513 FAM229BQ4G0N7 80 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 ST20-AS1Q8NBB2 130 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 C1orf64Q8NEQ6 169 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 CHCHD1Q96BP2 118 aaKnown RBP3.48□□□□□ -1.85
DDB1-219ENST00000541513 SLC50A1Q9BRV3 221 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 LINC00474Q9P2X8 69 aa3.48□□□□□ -1.85
DDB1-219ENST00000541513 DNAH10OSP0CZ25 163 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 IAPPP10997 89 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 DEFB136Q30KP8 78 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 SPANXN1Q5VSR9 72 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 Q6ZR54 194 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 CYP2G1PQ6ZSU1 146 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 KRTAP7-1Q8IUC3 87 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 WFDC9Q8NEX5 89 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 LINC00467Q9BRT7 94 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 NHP2Q9NX24 153 aaKnown RBP3.47□□□□□ -1.85
DDB1-219ENST00000541513 PSENENQ9NZ42 101 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 TP53TG3Q9ULZ0 132 aa3.47□□□□□ -1.85
DDB1-219ENST00000541513 TRAV13-2A0A0B4J235 113 aa3.46□□□□□ -1.86
DDB1-219ENST00000541513 FXYD2P54710 66 aa3.46□□□□□ -1.86
DDB1-219ENST00000541513 ZNF56Q15929 161 aa3.46□□□□□ -1.86
DDB1-219ENST00000541513 ESRGQ1W209 222 aa3.46□□□□□ -1.86
DDB1-219ENST00000541513 DEFB121Q5J5C9 76 aa3.46□□□□□ -1.86
DDB1-219ENST00000541513 SPANXN5Q5MJ07 72 aa3.46□□□□□ -1.86
DDB1-219ENST00000541513 PPP1R1CQ8WVI7 109 aa3.46□□□□□ -1.86
DDB1-219ENST00000541513 ARL2-SNX15V9GYD0 113 aa3.46□□□□□ -1.86
DDB1-219ENST00000541513 H7BZZ5 65 aa3.45□□□□□ -1.86
DDB1-219ENST00000541513 NDUFA4O00483 81 aa3.45□□□□□ -1.86
DDB1-219ENST00000541513 CTSGP08311 255 aa3.45□□□□□ -1.86
DDB1-219ENST00000541513 S100A7L2Q5SY68 101 aa3.45□□□□□ -1.86
DDB1-219ENST00000541513 LINC00269Q8N2A0 174 aa3.45□□□□□ -1.86
DDB1-219ENST00000541513 MRPL36Q9P0J6 103 aaKnown RBP3.45□□□□□ -1.86
DDB1-219ENST00000541513 S4R3C0 116 aa3.45□□□□□ -1.86
DDB1-219ENST00000541513 TRAV7A0A075B6U4 112 aa3.44□□□□□ -1.86
DDB1-219ENST00000541513 C16orf90A8MZG2 172 aa3.44□□□□□ -1.86
DDB1-219ENST00000541513 GNRH2O43555 120 aa3.44□□□□□ -1.86
DDB1-219ENST00000541513 IGKV1-17P01599 117 aa3.44□□□□□ -1.86
DDB1-219ENST00000541513 KLKP1Q107X0 134 aa3.44□□□□□ -1.86
DDB1-219ENST00000541513 LYPD5Q6UWN5 251 aa3.44□□□□□ -1.86
DDB1-219ENST00000541513 TMEM141Q96I45 108 aa3.44□□□□□ -1.86
DDB1-219ENST00000541513 RETNLBQ9BQ08 111 aa3.44□□□□□ -1.86
DDB1-219ENST00000541513 SMAD5-AS1Q9Y6J3 95 aa3.44□□□□□ -1.86
DDB1-219ENST00000541513 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 TRBV10-2A0A0K0K1G8 114 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 A0A1B0GU33 70 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 C2orf70A6NJV1 201 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 GCHFRP30047 84 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 C14orf177Q52M58 125 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 LYZL1Q6UWQ5 148 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 Q8NAQ8 132 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 DYNLRB2Q8TF09 96 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 NDUFA12Q9UI09 145 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 MEGF8Q7Z7M0 2845 aa3.43□□□□□ -1.86
DDB1-219ENST00000541513 AGRNO00468 2067 aa3.42□□□□□ -1.86
DDB1-219ENST00000541513 IGLV4-69A0A075B6H9 119 aa3.42□□□□□ -1.86
DDB1-219ENST00000541513 IGLV1-51P01701 117 aa3.42□□□□□ -1.86
DDB1-219ENST00000541513 KPRPQ5T749 579 aaPredicted RBP3.42□□□□□ -1.86
DDB1-219ENST00000541513 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
DDB1-219ENST00000541513 SMIM7Q9BQ49 75 aa3.42□□□□□ -1.86
DDB1-219ENST00000541513 IL4P05112 153 aa3.41□□□□□ -1.86
DDB1-219ENST00000541513 ZNF22P17026 224 aaPredicted RBP3.41□□□□□ -1.86
DDB1-219ENST00000541513 UBE2D3P61077 147 aa3.41□□□□□ -1.86
DDB1-219ENST00000541513 UBE2D2P62837 147 aa3.41□□□□□ -1.86
DDB1-219ENST00000541513 DEFB114Q30KQ6 69 aa3.41□□□□□ -1.86
DDB1-219ENST00000541513 TIMM21Q9BVV7 248 aa3.41□□□□□ -1.86
DDB1-219ENST00000541513 GFRA4Q9GZZ7 299 aa3.41□□□□□ -1.86
DDB1-219ENST00000541513 CYP4F30PQ9H0H9 118 aa3.41□□□□□ -1.86
DDB1-219ENST00000541513 TIMM9Q9Y5J7 89 aa3.41□□□□□ -1.86
DDB1-219ENST00000541513 PRKDCP78527 4128 aaKnown RBP3.41□□□□□ -1.86
DDB1-219ENST00000541513 IGHV3OR16-8A0A075B7F1 116 aa3.4□□□□□ -1.87
DDB1-219ENST00000541513 LOC107984156A0A0G2JMH3 177 aa3.4□□□□□ -1.87
DDB1-219ENST00000541513 hDV103S1A0JD37 113 aa3.4□□□□□ -1.87
DDB1-219ENST00000541513 H3BRN7 92 aa3.4□□□□□ -1.87
DDB1-219ENST00000541513 H7C2G1 150 aa3.4□□□□□ -1.87
DDB1-219ENST00000541513 ARL17AQ8IVW1 177 aa3.4□□□□□ -1.87
DDB1-219ENST00000541513 IFI27L1Q96BM0 104 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms