RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 FAM24AA6NFZ4 105 aa-0.75□□□□□ -2.53
PCM1-217ENST00000522998 Q0VG73 95 aa-0.75□□□□□ -2.53
PCM1-217ENST00000522998 SFTA2Q6UW10 78 aa-0.75□□□□□ -2.53
PCM1-217ENST00000522998 LINC00846Q9NV44 126 aa-0.75□□□□□ -2.53
PCM1-217ENST00000522998 SCAPERQ9BY12 1400 aa-0.75□□□□□ -2.53
PCM1-217ENST00000522998 PKD1L2Q7Z442 2459 aa-0.75□□□□□ -2.53
PCM1-217ENST00000522998 LRRK2Q5S007 2527 aa-0.75□□□□□ -2.53
PCM1-217ENST00000522998 USP9XQ93008 2570 aaPredicted RBP-0.75□□□□□ -2.53
PCM1-217ENST00000522998 TOP2BQ02880 1626 aa-0.75□□□□□ -2.53
PCM1-217ENST00000522998 ANK3Q12955 4377 aaKnown RBP-0.75□□□□□ -2.53
PCM1-217ENST00000522998 ACACAQ13085 2346 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 I3L3M4 83 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 COX6CP09669 75 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 SEC11AP67812 179 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 HEPN1Q6WQI6 88 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 MYOM2P54296 1465 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 CICQ96RK0 1608 aaPredicted RBP-0.76□□□□□ -2.53
PCM1-217ENST00000522998 RGPD2P0DJD1 1756 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 CCDC168Q8NDH2 2452 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 NBEAL2Q6ZNJ1 2754 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 RELNP78509 3460 aa-0.76□□□□□ -2.53
PCM1-217ENST00000522998 C5orf42Q9H799 3197 aa-0.77□□□□□ -2.53
PCM1-217ENST00000522998 KNDC1Q76NI1 1749 aa-0.77□□□□□ -2.53
PCM1-217ENST00000522998 KIAA1551Q9HCM1 1747 aa-0.77□□□□□ -2.53
PCM1-217ENST00000522998 PLECQ15149 4684 aaKnown RBP-0.77□□□□□ -2.53
PCM1-217ENST00000522998 A0A1B0GWA3 101 aa-0.77□□□□□ -2.53
PCM1-217ENST00000522998 FAM223BA6NKX1 122 aa-0.77□□□□□ -2.53
PCM1-217ENST00000522998 WFDC13Q8IUB5 93 aa-0.77□□□□□ -2.53
PCM1-217ENST00000522998 MANBALQ9NQG1 85 aa-0.77□□□□□ -2.53
PCM1-217ENST00000522998 PRO1854Q9UHT4 67 aa-0.77□□□□□ -2.53
PCM1-217ENST00000522998 COL12A1Q99715 3063 aa-0.77□□□□□ -2.53
PCM1-217ENST00000522998 RIF1Q5UIP0 2472 aaKnown RBP-0.77□□□□□ -2.53
PCM1-217ENST00000522998 RANBP2P49792 3224 aaKnown RBP-0.77□□□□□ -2.53
PCM1-217ENST00000522998 FRYQ5TBA9 3013 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 DSPP15924 2871 aaKnown RBP-0.78□□□□□ -2.53
PCM1-217ENST00000522998 SACSQ9NZJ4 4579 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 TRAV30A0A087WSZ9 112 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 A0A087WVE0 104 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 A0A1B0GU69 56 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 NAP1L6A6NFF2 107 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 TRAPPC2P0DI81 140 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 TRAPPC2BP0DI82 140 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 SAA2P0DJI9 122 aaPredicted RBP-0.78□□□□□ -2.53
PCM1-217ENST00000522998 RPL13AP3Q6NVV1 102 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 MRPL34Q9BQ48 92 aaKnown RBP-0.78□□□□□ -2.53
PCM1-217ENST00000522998 MTORP42345 2549 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 BCORQ6W2J9 1755 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 C4AP0C0L4 1744 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 C4BP0C0L5 1744 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 PDE4DIPQ5VU43 2346 aa-0.78□□□□□ -2.53
PCM1-217ENST00000522998 TARBP1Q13395 1621 aaKnown RBP-0.78□□□□□ -2.54
PCM1-217ENST00000522998 CUX1P39880 1505 aa-0.79□□□□□ -2.54
PCM1-217ENST00000522998 ANKRD50Q9ULJ7 1429 aa-0.79□□□□□ -2.54
PCM1-217ENST00000522998 NCOA3Q9Y6Q9 1424 aa-0.79□□□□□ -2.54
PCM1-217ENST00000522998 H3BQ15 152 aa-0.79□□□□□ -2.54
PCM1-217ENST00000522998 SNAPC5O75971 98 aa-0.79□□□□□ -2.54
PCM1-217ENST00000522998 SNCAP37840 140 aa-0.79□□□□□ -2.54
PCM1-217ENST00000522998 DEFA5Q01523 94 aa-0.79□□□□□ -2.54
PCM1-217ENST00000522998 C12orf57Q99622 126 aa-0.79□□□□□ -2.54
PCM1-217ENST00000522998 LRRC37AA6NMS7 1700 aa-0.79□□□□□ -2.54
PCM1-217ENST00000522998 CCDC141Q6ZP82 1450 aa-0.8□□□□□ -2.54
PCM1-217ENST00000522998 EDC4Q6P2E9 1401 aaKnown RBP-0.8□□□□□ -2.54
PCM1-217ENST00000522998 SCN11AQ9UI33 1791 aa-0.8□□□□□ -2.54
PCM1-217ENST00000522998 MON2Q7Z3U7 1717 aa-0.8□□□□□ -2.54
PCM1-217ENST00000522998 EFCAB10A6NFE3 127 aa-0.8□□□□□ -2.54
PCM1-217ENST00000522998 DLEU1O43261 78 aa-0.8□□□□□ -2.54
PCM1-217ENST00000522998 HSD52Q0P140 79 aa-0.8□□□□□ -2.54
PCM1-217ENST00000522998 C6orf201Q7Z4U5 140 aa-0.8□□□□□ -2.54
PCM1-217ENST00000522998 CDKN2A-AS1Q9UH64 79 aa-0.8□□□□□ -2.54
PCM1-217ENST00000522998 CC2D2AQ9P2K1 1620 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 DNHD1Q96M86 4753 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 NRKQ7Z2Y5 1582 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 CORTO00230 105 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 GNG4P50150 75 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 DEFB107AQ8IZN7 70 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 SVBPQ8N300 66 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 DNAH1Q9P2D7 4330 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 MAPKBP1O60336 1514 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 CHD1O14646 1710 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 DYNC1H1Q14204 4646 aaKnown RBP-0.81□□□□□ -2.54
PCM1-217ENST00000522998 ACACBO00763 2458 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 SHPRHQ149N8 1683 aa-0.81□□□□□ -2.54
PCM1-217ENST00000522998 ITPR1Q14643 2758 aa-0.82□□□□□ -2.54
PCM1-217ENST00000522998 ARHGAP5Q13017 1502 aa-0.82□□□□□ -2.54
PCM1-217ENST00000522998 PPP3R1P63098 170 aa-0.82□□□□□ -2.54
PCM1-217ENST00000522998 HIGD1BQ9P298 99 aa-0.82□□□□□ -2.54
PCM1-217ENST00000522998 SPHKAPQ2M3C7 1700 aa-0.82□□□□□ -2.54
PCM1-217ENST00000522998 FAM186AA6NE01 2351 aa-0.82□□□□□ -2.54
PCM1-217ENST00000522998 C5P01031 1676 aa-0.82□□□□□ -2.54
PCM1-217ENST00000522998 SRCAPQ6ZRS2 3230 aa-0.82□□□□□ -2.54
PCM1-217ENST00000522998 KIF20BQ96Q89 1820 aa-0.82□□□□□ -2.54
PCM1-217ENST00000522998 CHD7Q9P2D1 2997 aa-0.83□□□□□ -2.54
PCM1-217ENST00000522998 PREX1Q8TCU6 1659 aa-0.83□□□□□ -2.54
PCM1-217ENST00000522998 A0A0G2JND7 137 aa-0.83□□□□□ -2.54
PCM1-217ENST00000522998 SPTY2D1-AS1A0A0U1RR47 76 aa-0.83□□□□□ -2.54
PCM1-217ENST00000522998 A0A1B0GV90 55 aa-0.83□□□□□ -2.54
PCM1-217ENST00000522998 C9orf92A6NGG3 77 aa-0.83□□□□□ -2.54
PCM1-217ENST00000522998 CCL22O00626 93 aa-0.83□□□□□ -2.54
PCM1-217ENST00000522998 ASIPP42127 132 aa-0.83□□□□□ -2.54
PCM1-217ENST00000522998 MT1HP80294 61 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms