RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 Q9BRP9 147 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 ARL2-SNX15V9GYD0 113 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 RTTNQ86VV8 2226 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 TACC2O95359 2948 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 OTOGQ6ZRI0 2925 aa1.72□□□□□ -2.13
VPS13B-207ENST00000518569 MAP1AP78559 2803 aaPredicted RBP1.72□□□□□ -2.13
VPS13B-207ENST00000518569 KNTC1P50748 2209 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 HEATR5AQ86XA9 2040 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 SCN8AQ9UQD0 1980 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 FXYD6-FXYD2A0A087WZ82 144 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 TEX49A0A1B0GTD5 131 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 A0A1W2PNM2 257 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 C2orf70A6NJV1 201 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 IQCF6A8MYZ5 107 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 F8WEM9 126 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 DNAL4O96015 105 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 IFI27P40305 119 aaPredicted RBP1.71□□□□□ -2.14
VPS13B-207ENST00000518569 SSBP1Q04837 148 aaKnown RBP1.71□□□□□ -2.14
VPS13B-207ENST00000518569 KRTAP25-1Q3LHN0 102 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 KRTAP21-3Q3LHN1 58 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 PYDC2Q56P42 97 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 FAM74A4Q5TZK3 123 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 Q6JHZ5 121 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 FAM223AQ8IWN6 122 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 FXYD6Q9H0Q3 95 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 CDC42SE2Q9NRR3 84 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 MRPL36Q9P0J6 103 aaKnown RBP1.71□□□□□ -2.14
VPS13B-207ENST00000518569 ANKRD12Q6UB98 2062 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 MTORP42345 2549 aa1.71□□□□□ -2.14
VPS13B-207ENST00000518569 PCDH15Q96QU1 1955 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 IGLV3-32A0A0A0MS00 114 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 TRBV6-8A0A0A6YYG3 113 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 A0A0J9YY99 117 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 A0A1W2PNN7 141 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 NUPR2A6NF83 97 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 D6R8Y8 96 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 HMGN4O00479 90 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 LEPROTL1O95214 131 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 IGLV6-57P01721 117 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 C3orf79P0CE67 100 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 Q5VV11 94 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 KRTAP26-1Q6PEX3 210 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 KRTAP13-1Q8IUC0 172 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 MUSTN1Q8IVN3 82 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 KNL1Q8NG31 2342 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 CYSTM1Q9H1C7 97 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 TMEM14BQ9NUH8 114 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 CCDC88CQ9P219 2028 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 APCP25054 2843 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 DCHS2Q6V1P9 2916 aa1.7□□□□□ -2.14
VPS13B-207ENST00000518569 TRBV6-7A0A0A0MS04 114 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 LOC101927531A0A1B0GV80 90 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 H3BVH4 76 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 PPP1R17O96001 155 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 CTSGP08311 255 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 CD52P31358 61 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 ATXN8Q156A1 80 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 SFTA2Q6UW10 78 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 NDUFA4L2Q9NRX3 87 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 R4GMQ9 66 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 HIVEP1P15822 2718 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 PLXNA2O75051 1894 aa1.69□□□□□ -2.14
VPS13B-207ENST00000518569 TANC2Q9HCD6 1990 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 DIDO1Q9BTC0 2240 aaKnown RBP1.68□□□□□ -2.14
VPS13B-207ENST00000518569 ANKHD1Q8IWZ3 2542 aaKnown RBP1.68□□□□□ -2.14
VPS13B-207ENST00000518569 IGHV3-30P01768 117 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 ARMS2P0C7Q2 107 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 IGHV3-30-5P0DP03 117 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 CNBPP62633 177 aaKnown RBP1.68□□□□□ -2.14
VPS13B-207ENST00000518569 SPAG11BQ08648 103 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 ESPL1Q14674 2120 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 CSAG1Q6PB30 78 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 SPAG11AQ6PDA7 123 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 BPESC1Q9GZL8 116 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 PRO2289Q9P1D8 64 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 R4GN34 69 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 NYNRINQ9P2P1 1898 aaKnown RBP1.68□□□□□ -2.14
VPS13B-207ENST00000518569 NBEAL1Q6ZS30 2694 aa1.68□□□□□ -2.14
VPS13B-207ENST00000518569 NUMA1Q14980 2115 aa1.67□□□□□ -2.14
VPS13B-207ENST00000518569 HIVEP3Q5T1R4 2406 aa1.67□□□□□ -2.14
VPS13B-207ENST00000518569 ABCA2Q9BZC7 2435 aa1.67□□□□□ -2.14
VPS13B-207ENST00000518569 NDUFB1O75438 58 aa1.67□□□□□ -2.14
VPS13B-207ENST00000518569 HRES1P13985 223 aa1.67□□□□□ -2.14
VPS13B-207ENST00000518569 PATE1Q8WXA2 126 aa1.67□□□□□ -2.14
VPS13B-207ENST00000518569 HILPDAQ9Y5L2 63 aa1.67□□□□□ -2.14
VPS13B-207ENST00000518569 AKAP9Q99996 3911 aa1.67□□□□□ -2.14
VPS13B-207ENST00000518569 ATRQ13535 2644 aa1.67□□□□□ -2.14
VPS13B-207ENST00000518569 RP1P56715 2156 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 CCDC168Q8NDH2 2452 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 BSNQ9UPA5 3926 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 TRBV6-4A0A1B0GX49 114 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 FAM223BA6NKX1 122 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 JMJD7-PLA2G4BH0Y9G9 81 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 PPYP01298 95 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 TFF1P04155 84 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 HMGA1P17096 107 aaKnown RBP1.66□□□□□ -2.14
VPS13B-207ENST00000518569 DEFB134Q4QY38 66 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 HCP5Q6MZN7 132 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 C9orf163Q8N9P6 203 aa1.66□□□□□ -2.14
VPS13B-207ENST00000518569 COX7B2Q8TF08 81 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms