RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 NAT8Q9UHE5 227 aa4.49□□□□□ -1.69
TNFRSF11B-202ENST00000517352 V9GYV3 84 aa4.49□□□□□ -1.69
TNFRSF11B-202ENST00000517352 TRBV30A0A0K0K1B3 111 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 LOC389332A0A1B0GUA5 103 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 NDUFC2-KCTD14E9PQ53 114 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 SRP19P09132 144 aaKnown RBP4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 MRPS36P82909 103 aaKnown RBP4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 RHEBQ15382 184 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 TMEM136Q6ZRR5 245 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 TMEM141Q96I45 108 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 CST9LQ9H4G1 147 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 SMDT1Q9H4I9 107 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 C6orf48Q9UBA6 75 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 LAMTOR2Q9Y2Q5 125 aa4.48□□□□□ -1.69
TNFRSF11B-202ENST00000517352 TRBV24-1A0A075B6N3 115 aa4.47□□□□□ -1.69
TNFRSF11B-202ENST00000517352 IGHV3OR16-9A0A0B4J2B5 98 aa4.47□□□□□ -1.69
TNFRSF11B-202ENST00000517352 A0A1B0GWB2 263 aa4.47□□□□□ -1.69
TNFRSF11B-202ENST00000517352 TLX1NBP0CAT3 122 aa4.47□□□□□ -1.69
TNFRSF11B-202ENST00000517352 RPL23P62829 140 aaKnown RBP4.47□□□□□ -1.69
TNFRSF11B-202ENST00000517352 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
TNFRSF11B-202ENST00000517352 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
TNFRSF11B-202ENST00000517352 PRELID3AQ96N28 172 aa4.47□□□□□ -1.69
TNFRSF11B-202ENST00000517352 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 SMIM27A0A1W2PRY6 76 aa4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 TMEM218A2RU14 115 aa4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 E9PLD3 99 aa4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 RPL28P46779 137 aaKnown RBP4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 SEC11AP67812 179 aa4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 RPL24P83731 157 aaKnown RBP4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 C2orf82Q6UX34 121 aa4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 SCGB1D4Q6XE38 83 aa4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 CYSLTR1Q9Y271 337 aa4.46□□□□□ -1.7
TNFRSF11B-202ENST00000517352 NUPR1O60356 82 aa4.45□□□□□ -1.7
TNFRSF11B-202ENST00000517352 ZNF861PO60384 105 aa4.45□□□□□ -1.7
TNFRSF11B-202ENST00000517352 NPYP01303 97 aa4.45□□□□□ -1.7
TNFRSF11B-202ENST00000517352 TYMSOSQ8TAI1 123 aa4.45□□□□□ -1.7
TNFRSF11B-202ENST00000517352 PLEKHB2Q96CS7 222 aa4.45□□□□□ -1.7
TNFRSF11B-202ENST00000517352 LPAP08519 4548 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 J3QR89 54 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 SCO1O75880 301 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 CRYGAP11844 174 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 UBE2AP49459 152 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 ORMDL2Q53FV1 153 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 LINC00242Q5T6M2 205 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 ANKRD29Q8N6D5 301 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 GNB1LQ9BYB4 327 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 XAGE1AQ9HD64 81 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 PYGO1Q9Y3Y4 419 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 C22orf24Q9Y442 160 aa4.44□□□□□ -1.7
TNFRSF11B-202ENST00000517352 IGLV4-3A0A075B6K6 122 aa4.43□□□□□ -1.7
TNFRSF11B-202ENST00000517352 C9JAW5 83 aa4.43□□□□□ -1.7
TNFRSF11B-202ENST00000517352 PSMB2P49721 201 aa4.43□□□□□ -1.7
TNFRSF11B-202ENST00000517352 HERVK_113P63121 156 aa4.43□□□□□ -1.7
TNFRSF11B-202ENST00000517352 COL5A1-AS1Q5SY13 56 aa4.43□□□□□ -1.7
TNFRSF11B-202ENST00000517352 C2orf66Q6UXQ4 117 aa4.43□□□□□ -1.7
TNFRSF11B-202ENST00000517352 ATP5L2Q7Z4Y8 100 aa4.43□□□□□ -1.7
TNFRSF11B-202ENST00000517352 NKAPP1Q8N9T2 125 aa4.43□□□□□ -1.7
TNFRSF11B-202ENST00000517352 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
TNFRSF11B-202ENST00000517352 F8VRH5 84 aa4.42□□□□□ -1.7
TNFRSF11B-202ENST00000517352 NDUFS5O43920 106 aa4.42□□□□□ -1.7
TNFRSF11B-202ENST00000517352 MT-ND4LP03901 98 aa4.42□□□□□ -1.7
TNFRSF11B-202ENST00000517352 JOSD1Q15040 202 aaPredicted RBP4.42□□□□□ -1.7
TNFRSF11B-202ENST00000517352 C9orf129Q5T035 196 aaKnown RBP4.42□□□□□ -1.7
TNFRSF11B-202ENST00000517352 ANAPC13Q9BS18 74 aa4.42□□□□□ -1.7
TNFRSF11B-202ENST00000517352 IGKV2D-26A0A0A0MRZ7 120 aa4.41□□□□□ -1.7
TNFRSF11B-202ENST00000517352 RPL37AP8A6NKH3 93 aa4.41□□□□□ -1.7
TNFRSF11B-202ENST00000517352 BCE1O60756 84 aa4.41□□□□□ -1.7
TNFRSF11B-202ENST00000517352 CXCL5P42830 114 aa4.41□□□□□ -1.7
TNFRSF11B-202ENST00000517352 KIAA0087Q14695 138 aa4.41□□□□□ -1.7
TNFRSF11B-202ENST00000517352 KRTAP11-1Q8IUC1 163 aa4.41□□□□□ -1.7
TNFRSF11B-202ENST00000517352 Q8IZM0 81 aa4.41□□□□□ -1.7
TNFRSF11B-202ENST00000517352 Q8N8P6 123 aa4.41□□□□□ -1.7
TNFRSF11B-202ENST00000517352 LAMTOR3Q9UHA4 124 aa4.41□□□□□ -1.7
TNFRSF11B-202ENST00000517352 MUC2Q02817 5179 aa4.4□□□□□ -1.7
TNFRSF11B-202ENST00000517352 A0A1B0GXF2 115 aa4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 C8orf87E5RJ46 101 aa4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 K7EMI3 77 aa4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 LINC00310P59036 64 aa4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 ZC2HC1BQ5TFG8 222 aa4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 LYRM7Q5U5X0 104 aa4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 GTF2H5Q6ZYL4 71 aa4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 SCGB3A1Q96QR1 104 aa4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 SNHG12Q9BXW3 62 aa4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 NXT2Q9NPJ8 142 aaKnown RBP4.4□□□□□ -1.71
TNFRSF11B-202ENST00000517352 KRTAP1-4P0C5Y4 121 aa4.39□□□□□ -1.71
TNFRSF11B-202ENST00000517352 S100A2P29034 98 aa4.39□□□□□ -1.71
TNFRSF11B-202ENST00000517352 CDKN2A-AS1Q9UH64 79 aa4.39□□□□□ -1.71
TNFRSF11B-202ENST00000517352 C9JQL5 133 aa4.38□□□□□ -1.71
TNFRSF11B-202ENST00000517352 H3BRM9 83 aa4.38□□□□□ -1.71
TNFRSF11B-202ENST00000517352 NDUFA6P56556 154 aa4.38□□□□□ -1.71
TNFRSF11B-202ENST00000517352 FABP9Q0Z7S8 132 aa4.38□□□□□ -1.71
TNFRSF11B-202ENST00000517352 COX7B2Q8TF08 81 aa4.38□□□□□ -1.71
TNFRSF11B-202ENST00000517352 HIST1H4GQ99525 98 aa4.38□□□□□ -1.71
TNFRSF11B-202ENST00000517352 SMCO4Q9NRQ5 59 aa4.38□□□□□ -1.71
TNFRSF11B-202ENST00000517352 TP73-AS1Q9UF72 201 aa4.38□□□□□ -1.71
TNFRSF11B-202ENST00000517352 IGKV2-28A0A075B6P5 120 aa4.37□□□□□ -1.71
TNFRSF11B-202ENST00000517352 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
TNFRSF11B-202ENST00000517352 DPM2O94777 84 aa4.37□□□□□ -1.71
TNFRSF11B-202ENST00000517352 IGKV2D-28P01615 120 aa4.37□□□□□ -1.71
TNFRSF11B-202ENST00000517352 LINC00173Q6ZV60 143 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms