RNA–Protein interactions for RNA: ENST00000516539.1

RNU6-1256P-201, Transcript of RNA, U6 small nuclear 1256, pseudogene, humanhuman

BASIC

Gene RNU6-1256P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1256P-201ENST00000516539 CPSF4LA6NMK7 179 aaKnown RBP0.34□□□□□ -2.36
RNU6-1256P-201ENST00000516539 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
RNU6-1256P-201ENST00000516539 DEFB112Q30KQ8 113 aa0.34□□□□□ -2.36
RNU6-1256P-201ENST00000516539 MAST4O15021 2626 aa0.34□□□□□ -2.36
RNU6-1256P-201ENST00000516539 SLIT1O75093 1534 aa0.33□□□□□ -2.36
RNU6-1256P-201ENST00000516539 NCOR2Q9Y618 2525 aa0.33□□□□□ -2.36
RNU6-1256P-201ENST00000516539 NCOR1O75376 2440 aa0.33□□□□□ -2.36
RNU6-1256P-201ENST00000516539 SUPT6HQ7KZ85 1726 aaKnown RBP0.33□□□□□ -2.36
RNU6-1256P-201ENST00000516539 SYNE1Q8NF91 8797 aaKnown RBP0.32□□□□□ -2.36
RNU6-1256P-201ENST00000516539 ALKQ9UM73 1620 aa0.32□□□□□ -2.36
RNU6-1256P-201ENST00000516539 SPTY2D1-AS1A0A0U1RR47 76 aa0.32□□□□□ -2.36
RNU6-1256P-201ENST00000516539 TDRG1Q3Y452 100 aa0.32□□□□□ -2.36
RNU6-1256P-201ENST00000516539 DEFB105AQ8NG35 78 aa0.32□□□□□ -2.36
RNU6-1256P-201ENST00000516539 S100A13Q99584 98 aa0.32□□□□□ -2.36
RNU6-1256P-201ENST00000516539 MAP3K4Q9Y6R4 1608 aa0.31□□□□□ -2.36
RNU6-1256P-201ENST00000516539 MED14O60244 1454 aa0.31□□□□□ -2.36
RNU6-1256P-201ENST00000516539 NKTRP30414 1462 aaKnown RBP0.31□□□□□ -2.36
RNU6-1256P-201ENST00000516539 ATP7BP35670 1465 aa0.31□□□□□ -2.36
RNU6-1256P-201ENST00000516539 CEBPZOSA8MTT3 80 aa0.31□□□□□ -2.36
RNU6-1256P-201ENST00000516539 PTPN13Q12923 2485 aa0.31□□□□□ -2.36
RNU6-1256P-201ENST00000516539 KIF14Q15058 1648 aa0.31□□□□□ -2.36
RNU6-1256P-201ENST00000516539 CCDC18Q5T9S5 1454 aa0.3□□□□□ -2.36
RNU6-1256P-201ENST00000516539 LRRC9Q6ZRR7 1453 aa0.3□□□□□ -2.36
RNU6-1256P-201ENST00000516539 CCL22O00626 93 aa0.3□□□□□ -2.36
RNU6-1256P-201ENST00000516539 FXYD6Q9H0Q3 95 aa0.3□□□□□ -2.36
RNU6-1256P-201ENST00000516539 APLNQ9ULZ1 77 aa0.3□□□□□ -2.36
RNU6-1256P-201ENST00000516539 VWFP04275 2813 aa0.3□□□□□ -2.36
RNU6-1256P-201ENST00000516539 CLIP1P30622 1438 aa0.3□□□□□ -2.36
RNU6-1256P-201ENST00000516539 UBR5O95071 2799 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1256P-201ENST00000516539 ADIRFQ15847 76 aa0.29□□□□□ -2.36
RNU6-1256P-201ENST00000516539 MRPL34Q9BQ48 92 aaKnown RBP0.29□□□□□ -2.36
RNU6-1256P-201ENST00000516539 ST20Q9HBF5 79 aa0.29□□□□□ -2.36
RNU6-1256P-201ENST00000516539 QSER1Q2KHR3 1735 aa0.29□□□□□ -2.36
RNU6-1256P-201ENST00000516539 TENM4Q6N022 2769 aa0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 CSMD3Q7Z407 3707 aa0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 GVINP1Q7Z2Y8 2422 aa0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 FAT4Q6V0I7 4981 aa0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 COX7BP24311 80 aa0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 RPL38P63173 70 aaKnown RBP0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 GAFA1Q96PS6 74 aa0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 LRP1Q07954 4544 aaKnown RBP0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 SPTA1P02549 2419 aa0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 ABCA2Q9BZC7 2435 aa0.28□□□□□ -2.36
RNU6-1256P-201ENST00000516539 CSPG4Q6UVK1 2322 aa0.27□□□□□ -2.37
RNU6-1256P-201ENST00000516539 HIVEP3Q5T1R4 2406 aa0.27□□□□□ -2.37
RNU6-1256P-201ENST00000516539 DMBT1Q9UGM3 2413 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1256P-201ENST00000516539 RGPD2P0DJD1 1756 aa0.27□□□□□ -2.37
RNU6-1256P-201ENST00000516539 BCORQ6W2J9 1755 aa0.27□□□□□ -2.37
RNU6-1256P-201ENST00000516539 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1256P-201ENST00000516539 NDUFB1O75438 58 aa0.27□□□□□ -2.37
RNU6-1256P-201ENST00000516539 MAGI2Q86UL8 1455 aa0.27□□□□□ -2.37
RNU6-1256P-201ENST00000516539 WNK2Q9Y3S1 2297 aa0.26□□□□□ -2.37
RNU6-1256P-201ENST00000516539 KLK9Q2XQG4 91 aa0.26□□□□□ -2.37
RNU6-1256P-201ENST00000516539 RGPD1P0DJD0 1748 aa0.25□□□□□ -2.37
RNU6-1256P-201ENST00000516539 TMEM131LA2VDJ0 1609 aa0.25□□□□□ -2.37
RNU6-1256P-201ENST00000516539 SCRIBQ14160 1630 aa0.25□□□□□ -2.37
RNU6-1256P-201ENST00000516539 TRAV21A0A0B4J279 112 aa0.25□□□□□ -2.37
RNU6-1256P-201ENST00000516539 RGPD8O14715 1765 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1256P-201ENST00000516539 LTN1O94822 1766 aa0.24□□□□□ -2.37
RNU6-1256P-201ENST00000516539 RGPD5Q99666 1765 aa0.24□□□□□ -2.37
RNU6-1256P-201ENST00000516539 LRRC7Q96NW7 1537 aa0.24□□□□□ -2.37
RNU6-1256P-201ENST00000516539 H1FX-AS1Q4G0G2 97 aa0.24□□□□□ -2.37
RNU6-1256P-201ENST00000516539 WFDC9Q8NEX5 89 aa0.24□□□□□ -2.37
RNU6-1256P-201ENST00000516539 CDKN2A-AS1Q9UH64 79 aa0.24□□□□□ -2.37
RNU6-1256P-201ENST00000516539 CHD6Q8TD26 2715 aa0.23□□□□□ -2.37
RNU6-1256P-201ENST00000516539 URB2Q14146 1524 aaKnown RBP0.23□□□□□ -2.37
RNU6-1256P-201ENST00000516539 MUC5BQ9HC84 5762 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1256P-201ENST00000516539 ARHGAP35Q9NRY4 1499 aa0.22□□□□□ -2.37
RNU6-1256P-201ENST00000516539 PKD1L1Q8TDX9 2849 aa0.22□□□□□ -2.37
RNU6-1256P-201ENST00000516539 LOC730098B7Z3J9 87 aa0.22□□□□□ -2.37
RNU6-1256P-201ENST00000516539 HEPN1Q6WQI6 88 aa0.22□□□□□ -2.37
RNU6-1256P-201ENST00000516539 COX6B2Q6YFQ2 88 aa0.22□□□□□ -2.37
RNU6-1256P-201ENST00000516539 CELSR1Q9NYQ6 3014 aa0.22□□□□□ -2.37
RNU6-1256P-201ENST00000516539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU6-1256P-201ENST00000516539 TIAM2Q8IVF5 1701 aa0.21□□□□□ -2.38
RNU6-1256P-201ENST00000516539 DEFB121Q5J5C9 76 aa0.21□□□□□ -2.38
RNU6-1256P-201ENST00000516539 ERVK-7P63135 1459 aa0.21□□□□□ -2.38
RNU6-1256P-201ENST00000516539 HMCN1Q96RW7 5635 aa0.2□□□□□ -2.38
RNU6-1256P-201ENST00000516539 ATP5EP2Q5VTU8 51 aa0.2□□□□□ -2.38
RNU6-1256P-201ENST00000516539 DCAF1Q9Y4B6 1507 aa0.19□□□□□ -2.38
RNU6-1256P-201ENST00000516539 POLR1AO95602 1720 aaPredicted RBP0.19□□□□□ -2.38
RNU6-1256P-201ENST00000516539 H3BUT2 72 aa0.19□□□□□ -2.38
RNU6-1256P-201ENST00000516539 HMGA1P17096 107 aaKnown RBP0.19□□□□□ -2.38
RNU6-1256P-201ENST00000516539 ATRQ13535 2644 aa0.19□□□□□ -2.38
RNU6-1256P-201ENST00000516539 KMT2AQ03164 3969 aa0.19□□□□□ -2.38
RNU6-1256P-201ENST00000516539 MAP1BP46821 2468 aaKnown RBP0.19□□□□□ -2.38
RNU6-1256P-201ENST00000516539 AHNAK2Q8IVF2 5795 aa0.19□□□□□ -2.38
RNU6-1256P-201ENST00000516539 ABCC1P33527 1531 aa0.18□□□□□ -2.38
RNU6-1256P-201ENST00000516539 HUWE1Q7Z6Z7 4374 aaKnown RBP0.18□□□□□ -2.38
RNU6-1256P-201ENST00000516539 PREX1Q8TCU6 1659 aa0.18□□□□□ -2.38
RNU6-1256P-201ENST00000516539 FLNCQ14315 2725 aa0.18□□□□□ -2.38
RNU6-1256P-201ENST00000516539 UMAD1C9J7I0 102 aa0.18□□□□□ -2.38
RNU6-1256P-201ENST00000516539 PRM1P04553 51 aa0.18□□□□□ -2.38
RNU6-1256P-201ENST00000516539 BVES-AS1Q5T3Y7 98 aa0.18□□□□□ -2.38
RNU6-1256P-201ENST00000516539 CHD8Q9HCK8 2581 aa0.18□□□□□ -2.38
RNU6-1256P-201ENST00000516539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.18□□□□□ -2.38
RNU6-1256P-201ENST00000516539 NCOA2Q15596 1464 aa0.17□□□□□ -2.38
RNU6-1256P-201ENST00000516539 WNK1Q9H4A3 2382 aa0.17□□□□□ -2.38
RNU6-1256P-201ENST00000516539 IFI27P40305 119 aaPredicted RBP0.17□□□□□ -2.38
RNU6-1256P-201ENST00000516539 BSNQ9UPA5 3926 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms