RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 CCNB3Q8WWL7 1395 aa0.91□□□□□ -2.26
SGCB-203ENST00000514133 ZNF609O15014 1411 aa0.9□□□□□ -2.26
SGCB-203ENST00000514133 UGGT2Q9NYU1 1516 aa0.9□□□□□ -2.26
SGCB-203ENST00000514133 MPC2O95563 127 aa0.9□□□□□ -2.27
SGCB-203ENST00000514133 SEC11AP67812 179 aa0.9□□□□□ -2.27
SGCB-203ENST00000514133 COX17Q14061 63 aa0.9□□□□□ -2.27
SGCB-203ENST00000514133 PRO1854Q9UHT4 67 aa0.9□□□□□ -2.27
SGCB-203ENST00000514133 LINC01558Q9Y6Z2 57 aa0.9□□□□□ -2.27
SGCB-203ENST00000514133 IQGAP2Q13576 1575 aa0.9□□□□□ -2.27
SGCB-203ENST00000514133 UGGT1Q9NYU2 1555 aa0.9□□□□□ -2.27
SGCB-203ENST00000514133 KDM5DQ9BY66 1539 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 KIF14Q15058 1648 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 USP32Q8NFA0 1604 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 UBR1Q8IWV7 1749 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 MYO7BQ6PIF6 2116 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 DNAH14Q0VDD8 3507 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 PAPPA2Q9BXP8 1791 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 TIAM1Q13009 1591 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 NCOA2Q15596 1464 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 COX6CP09669 75 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 TRAPPC2P0DI81 140 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 TRAPPC2BP0DI82 140 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 UBE2D3P61077 147 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 UBE2D2P62837 147 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 ARL2-SNX15V9GYD0 113 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 SMG1Q96Q15 3661 aaKnown RBP0.89□□□□□ -2.27
SGCB-203ENST00000514133 MYO5CQ9NQX4 1742 aa0.89□□□□□ -2.27
SGCB-203ENST00000514133 PRDM15P57071 1507 aaPredicted RBP0.89□□□□□ -2.27
SGCB-203ENST00000514133 RGPD8O14715 1765 aaPredicted RBP0.88□□□□□ -2.27
SGCB-203ENST00000514133 CACNA1CQ13936 2221 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 FYCO1Q9BQS8 1478 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 MLH3Q9UHC1 1453 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 STAB2Q8WWQ8 2551 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 APCP25054 2843 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 PIN1P1O15428 100 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 MT-ATP8P03928 68 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 HAMPP81172 84 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 PRO3102Q9H379 93 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 NXT2Q9NPJ8 142 aaKnown RBP0.88□□□□□ -2.27
SGCB-203ENST00000514133 FAIMQ9NVQ4 179 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 FMN2Q9NZ56 1722 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 ATP7AQ04656 1500 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 FRYLO94915 3013 aa0.88□□□□□ -2.27
SGCB-203ENST00000514133 DMDP11532 3685 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 SAMD9LQ8IVG5 1584 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 CFAP74Q9C0B2 1584 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 LOC400499M0QZD8 3231 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 LRRC9Q6ZRR7 1453 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 ARHGAP35Q9NRY4 1499 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 LRRIQ1Q96JM4 1722 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 ASXL3Q9C0F0 2248 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 MROH1Q8NDA8 1641 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 NBPF19A0A087WUL8 3843 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 PKIAP61925 76 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 SMIM5Q71RC9 77 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 SSBP3-AS1Q7Z2R9 100 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 FAM223AQ8IWN6 122 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 PMCHL2Q9BQD1 86 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 ASXL1Q8IXJ9 1541 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 COL4A6Q14031 1691 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 PLCH1Q4KWH8 1693 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 TRIOO75962 3097 aa0.87□□□□□ -2.27
SGCB-203ENST00000514133 DSTQ03001 7570 aaKnown RBP0.87□□□□□ -2.27
SGCB-203ENST00000514133 DSPP15924 2871 aaKnown RBP0.86□□□□□ -2.27
SGCB-203ENST00000514133 NRAPQ86VF7 1730 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 MYO15AQ9UKN7 3530 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 PIK3C2BO00750 1634 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 LAMC1P11047 1609 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 ABCC3O15438 1527 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 ZNF815PA8K554 130 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 LINC00032P0C843 101 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 IGLC1P0CG04 106 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 DPY30Q9C005 99 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 COL12A1Q99715 3063 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 PLXNC1O60486 1568 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 TJP1Q07157 1748 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 CDC42BPAQ5VT25 1732 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 WDFY3Q8IZQ1 3526 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 HIVEP1P15822 2718 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 C1orf167Q5SNV9 1468 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 NLRP1Q9C000 1473 aa0.86□□□□□ -2.27
SGCB-203ENST00000514133 F8P00451 2351 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 KCPQ6ZWJ8 1503 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 ITPR2Q14571 2701 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 DMXL1Q9Y485 3027 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 M0R3E3 92 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 MGPP08493 103 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 UBA52P62987 128 aaKnown RBP0.85□□□□□ -2.27
SGCB-203ENST00000514133 COX6A2Q02221 97 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 QSER1Q2KHR3 1735 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 COL5A1-AS1Q5SY13 56 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 KNDC1Q76NI1 1749 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 LINC00472Q9H8W2 130 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 KIAA1551Q9HCM1 1747 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 RGPD5Q99666 1765 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 NRXN3Q9Y4C0 1643 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 FREM2Q5SZK8 3169 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 NKTRP30414 1462 aaKnown RBP0.85□□□□□ -2.27
SGCB-203ENST00000514133 ERVK-7P63135 1459 aa0.85□□□□□ -2.27
SGCB-203ENST00000514133 LMTK2Q8IWU2 1503 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms