RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 LYNX1G3V0Z9 82 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 ANGP03950 147 aaKnown RBP2.15□□□□□ -2.07
PROM1-216ENST00000513946 LYNX1P0DP58 116 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 REG3AQ06141 175 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 SPAG11BQ08648 103 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 SYCNQ0VAF6 134 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 KIAA0087Q14695 138 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 C9orf116Q5BN46 136 aaPredicted RBP2.15□□□□□ -2.07
PROM1-216ENST00000513946 LELP1Q5T871 98 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 CHCHD10Q8WYQ3 142 aaPredicted RBP2.15□□□□□ -2.07
PROM1-216ENST00000513946 CCL19Q99731 98 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 RETNLBQ9BQ08 111 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 NOP10Q9NPE3 64 aaKnown RBP2.15□□□□□ -2.07
PROM1-216ENST00000513946 MYO7AQ13402 2215 aa2.15□□□□□ -2.07
PROM1-216ENST00000513946 DNAJC13O75165 2243 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 FAM168BA1KXE4 195 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 C8orf87E5RJ46 101 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 IGKV4-1P06312 121 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 DEFB124Q8NES8 71 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 LINC00474Q9P2X8 69 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 Q9UF83 564 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 LINC00588Q9Y4M8 146 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 MALRD1Q5VYJ5 2156 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 NACAE9PAV3 2078 aa2.14□□□□□ -2.07
PROM1-216ENST00000513946 ATRXP46100 2492 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 DEFB131BA0A096LNP1 70 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 SPART-AS1P0CW21 52 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 LY6EQ16553 131 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 C1orf137Q5JT78 98 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 SPTSSBQ8NFR3 76 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 ZCCHC13Q8WW36 166 aaKnown RBP2.13□□□□□ -2.07
PROM1-216ENST00000513946 CAMK2N2Q96S95 79 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 CYSTM1Q9H1C7 97 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 XAGE1AQ9HD64 81 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 PRR14LQ5THK1 2151 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 CACNA1BQ00975 2339 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 FAM186AA6NE01 2351 aa2.13□□□□□ -2.07
PROM1-216ENST00000513946 NAV3Q8IVL0 2385 aa2.12□□□□□ -2.07
PROM1-216ENST00000513946 IGKV3OR2-268A0A0C4DH90 116 aa2.12□□□□□ -2.07
PROM1-216ENST00000513946 PSPHP1O15172 72 aa2.12□□□□□ -2.07
PROM1-216ENST00000513946 GIG44P09565 113 aaPredicted RBP2.12□□□□□ -2.07
PROM1-216ENST00000513946 TLX1NBP0CAT3 122 aa2.12□□□□□ -2.07
PROM1-216ENST00000513946 ACYP2P14621 99 aa2.12□□□□□ -2.07
PROM1-216ENST00000513946 Q8N9L7 120 aa2.12□□□□□ -2.07
PROM1-216ENST00000513946 RBM12B-AS1Q9P1G2 102 aa2.12□□□□□ -2.07
PROM1-216ENST00000513946 LINC01558Q9Y6Z2 57 aa2.12□□□□□ -2.07
PROM1-216ENST00000513946 WNK2Q9Y3S1 2297 aa2.12□□□□□ -2.07
PROM1-216ENST00000513946 KIAA0100Q14667 2235 aaKnown RBP2.11□□□□□ -2.07
PROM1-216ENST00000513946 DOCK10Q96BY6 2186 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 IGLV8-61A0A075B6I0 122 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 IGLV4-60A0A075B6I1 120 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.11□□□□□ -2.07
PROM1-216ENST00000513946 A0A096LNT2 108 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 C3orf84H3BNL1 204 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 CNBPP62633 177 aaKnown RBP2.11□□□□□ -2.07
PROM1-216ENST00000513946 MOBPQ13875 183 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 BRD3OSQ6XYD6 125 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 Q6ZRX8 168 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 SCXQ7RTU7 201 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 ABCA1O95477 2261 aa2.11□□□□□ -2.07
PROM1-216ENST00000513946 AHCTF1Q8WYP5 2266 aa2.1□□□□□ -2.07
PROM1-216ENST00000513946 COL27A1Q8IZC6 1860 aaPredicted RBP2.1□□□□□ -2.07
PROM1-216ENST00000513946 A8MWP4 228 aa2.1□□□□□ -2.07
PROM1-216ENST00000513946 H0Y9J4 135 aa2.1□□□□□ -2.07
PROM1-216ENST00000513946 H0Y9P7 68 aa2.1□□□□□ -2.07
PROM1-216ENST00000513946 DEFB112Q30KQ8 113 aa2.1□□□□□ -2.07
PROM1-216ENST00000513946 C9orf129Q5T035 196 aaKnown RBP2.1□□□□□ -2.07
PROM1-216ENST00000513946 Q5VV11 94 aa2.1□□□□□ -2.07
PROM1-216ENST00000513946 DEFB104AQ8WTQ1 72 aa2.1□□□□□ -2.07
PROM1-216ENST00000513946 ZNF702PQ9H963 129 aa2.1□□□□□ -2.07
PROM1-216ENST00000513946 ZGRF1Q86YA3 2104 aa2.09□□□□□ -2.07
PROM1-216ENST00000513946 A8MUN3 132 aa2.09□□□□□ -2.07
PROM1-216ENST00000513946 K7ERS5 55 aa2.09□□□□□ -2.07
PROM1-216ENST00000513946 UQCR11O14957 56 aa2.09□□□□□ -2.07
PROM1-216ENST00000513946 IGLV1-51P01701 117 aa2.09□□□□□ -2.07
PROM1-216ENST00000513946 DEFB130BP0DP73 79 aa2.09□□□□□ -2.07
PROM1-216ENST00000513946 DEFB130AP0DP74 79 aa2.09□□□□□ -2.07
PROM1-216ENST00000513946 PRB4P10163 310 aaPredicted RBP2.09□□□□□ -2.07
PROM1-216ENST00000513946 PRB3Q04118 309 aaPredicted RBP2.09□□□□□ -2.07
PROM1-216ENST00000513946 ZNF706Q9Y5V0 76 aaPredicted RBP2.09□□□□□ -2.07
PROM1-216ENST00000513946 IGKV2D-24A0A075B6R9 120 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 C16orf90A8MZG2 172 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 DEFB1P60022 68 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 LINC01554Q52M75 96 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 UNQ6190/PRO20217Q6UXQ8 127 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 COA5Q86WW8 74 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 DEFB123Q8N688 67 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 Q8NAQ8 132 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 LINC01006Q8NI28 216 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 PRO3102Q9H379 93 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 CENPFP49454 3210 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 BRWD1Q9NSI6 2320 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 MUC4Q99102 2169 aa2.08□□□□□ -2.08
PROM1-216ENST00000513946 A6NN06 94 aa2.07□□□□□ -2.08
PROM1-216ENST00000513946 SPRR1AP35321 89 aa2.07□□□□□ -2.08
PROM1-216ENST00000513946 PRR4Q16378 134 aa2.07□□□□□ -2.08
PROM1-216ENST00000513946 SPAG11AQ6PDA7 123 aa2.07□□□□□ -2.08
PROM1-216ENST00000513946 URB1O60287 2271 aaKnown RBP2.07□□□□□ -2.08
PROM1-216ENST00000513946 TNRC18O15417 2968 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms