RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 NEXMIFQ5QGS0 1516 aa0.69□□□□□ -2.3
RFC1-214ENST00000512726 ALKQ9UM73 1620 aa0.69□□□□□ -2.3
RFC1-214ENST00000512726 COL14A1Q05707 1796 aaKnown RBP0.69□□□□□ -2.3
RFC1-214ENST00000512726 VWFP04275 2813 aa0.69□□□□□ -2.3
RFC1-214ENST00000512726 WNK2Q9Y3S1 2297 aa0.68□□□□□ -2.3
RFC1-214ENST00000512726 HIVEP3Q5T1R4 2406 aa0.68□□□□□ -2.3
RFC1-214ENST00000512726 SNRPFP62306 86 aaKnown RBP0.68□□□□□ -2.3
RFC1-214ENST00000512726 PLGLAQ15195 96 aa0.68□□□□□ -2.3
RFC1-214ENST00000512726 LRP1Q07954 4544 aaKnown RBP0.68□□□□□ -2.3
RFC1-214ENST00000512726 PTPN13Q12923 2485 aa0.67□□□□□ -2.3
RFC1-214ENST00000512726 ABCA2Q9BZC7 2435 aa0.66□□□□□ -2.3
RFC1-214ENST00000512726 I3L3M4 83 aa0.66□□□□□ -2.3
RFC1-214ENST00000512726 FXYD6Q9H0Q3 95 aa0.66□□□□□ -2.3
RFC1-214ENST00000512726 UACAQ9BZF9 1416 aa0.65□□□□□ -2.3
RFC1-214ENST00000512726 KIF14Q15058 1648 aa0.65□□□□□ -2.31
RFC1-214ENST00000512726 IQCF6A8MYZ5 107 aa0.65□□□□□ -2.31
RFC1-214ENST00000512726 DEFB112Q30KQ8 113 aa0.64□□□□□ -2.31
RFC1-214ENST00000512726 NKTRP30414 1462 aaKnown RBP0.64□□□□□ -2.31
RFC1-214ENST00000512726 HRNRQ86YZ3 2850 aaPredicted RBP0.64□□□□□ -2.31
RFC1-214ENST00000512726 MAP3K4Q9Y6R4 1608 aa0.64□□□□□ -2.31
RFC1-214ENST00000512726 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
RFC1-214ENST00000512726 CPSF4LA6NMK7 179 aaKnown RBP0.63□□□□□ -2.31
RFC1-214ENST00000512726 SPINK4O60575 86 aa0.63□□□□□ -2.31
RFC1-214ENST00000512726 DEFB105AQ8NG35 78 aa0.63□□□□□ -2.31
RFC1-214ENST00000512726 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
RFC1-214ENST00000512726 SPTA1P02549 2419 aa0.62□□□□□ -2.31
RFC1-214ENST00000512726 A0A1B0GUT8 65 aa0.62□□□□□ -2.31
RFC1-214ENST00000512726 LINC00643Q86TS7 51 aa0.62□□□□□ -2.31
RFC1-214ENST00000512726 CSPG4Q6UVK1 2322 aa0.62□□□□□ -2.31
RFC1-214ENST00000512726 CELSR1Q9NYQ6 3014 aa0.62□□□□□ -2.31
RFC1-214ENST00000512726 TENM4Q6N022 2769 aa0.61□□□□□ -2.31
RFC1-214ENST00000512726 SPTY2D1-AS1A0A0U1RR47 76 aa0.61□□□□□ -2.31
RFC1-214ENST00000512726 MYMXA0A1B0GTQ4 84 aa0.61□□□□□ -2.31
RFC1-214ENST00000512726 UBR3Q6ZT12 1888 aa0.61□□□□□ -2.31
RFC1-214ENST00000512726 ATP7BP35670 1465 aa0.61□□□□□ -2.31
RFC1-214ENST00000512726 DMBT1Q9UGM3 2413 aaPredicted RBP0.59□□□□□ -2.31
RFC1-214ENST00000512726 SUPT6HQ7KZ85 1726 aaKnown RBP0.59□□□□□ -2.31
RFC1-214ENST00000512726 ACYP1P07311 99 aa0.58□□□□□ -2.32
RFC1-214ENST00000512726 MED14O60244 1454 aa0.57□□□□□ -2.32
RFC1-214ENST00000512726 TDRG1Q3Y452 100 aa0.57□□□□□ -2.32
RFC1-214ENST00000512726 APLNQ9ULZ1 77 aa0.57□□□□□ -2.32
RFC1-214ENST00000512726 QSER1Q2KHR3 1735 aa0.57□□□□□ -2.32
RFC1-214ENST00000512726 ATRQ13535 2644 aa0.55□□□□□ -2.32
RFC1-214ENST00000512726 TMEM131LA2VDJ0 1609 aa0.55□□□□□ -2.32
RFC1-214ENST00000512726 RGPD2P0DJD1 1756 aa0.55□□□□□ -2.32
RFC1-214ENST00000512726 KLK9Q2XQG4 91 aa0.54□□□□□ -2.32
RFC1-214ENST00000512726 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
RFC1-214ENST00000512726 LRRC7Q96NW7 1537 aa0.54□□□□□ -2.32
RFC1-214ENST00000512726 KANTRA0A1W2PQU2 76 aa0.53□□□□□ -2.32
RFC1-214ENST00000512726 CCDC18Q5T9S5 1454 aa0.53□□□□□ -2.33
RFC1-214ENST00000512726 MAGI2Q86UL8 1455 aa0.53□□□□□ -2.33
RFC1-214ENST00000512726 RGPD1P0DJD0 1748 aa0.52□□□□□ -2.33
RFC1-214ENST00000512726 PKD1L1Q8TDX9 2849 aa0.52□□□□□ -2.33
RFC1-214ENST00000512726 MRPL34Q9BQ48 92 aaKnown RBP0.52□□□□□ -2.33
RFC1-214ENST00000512726 LRRC9Q6ZRR7 1453 aa0.52□□□□□ -2.33
RFC1-214ENST00000512726 BCORQ6W2J9 1755 aa0.52□□□□□ -2.33
RFC1-214ENST00000512726 CEBPZOSA8MTT3 80 aa0.51□□□□□ -2.33
RFC1-214ENST00000512726 CCL22O00626 93 aa0.5□□□□□ -2.33
RFC1-214ENST00000512726 COX7BP24311 80 aa0.5□□□□□ -2.33
RFC1-214ENST00000512726 CLIP1P30622 1438 aa0.49□□□□□ -2.33
RFC1-214ENST00000512726 GAFA1Q96PS6 74 aa0.49□□□□□ -2.33
RFC1-214ENST00000512726 S100A13Q99584 98 aa0.48□□□□□ -2.33
RFC1-214ENST00000512726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.47□□□□□ -2.33
RFC1-214ENST00000512726 RPL38P63173 70 aaKnown RBP0.45□□□□□ -2.34
RFC1-214ENST00000512726 H1FX-AS1Q4G0G2 97 aa0.45□□□□□ -2.34
RFC1-214ENST00000512726 CACNA1AO00555 2505 aa0.45□□□□□ -2.34
RFC1-214ENST00000512726 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
RFC1-214ENST00000512726 ADIRFQ15847 76 aa0.44□□□□□ -2.34
RFC1-214ENST00000512726 ST20Q9HBF5 79 aa0.44□□□□□ -2.34
RFC1-214ENST00000512726 LTN1O94822 1766 aa0.44□□□□□ -2.34
RFC1-214ENST00000512726 CHD8Q9HCK8 2581 aa0.43□□□□□ -2.34
RFC1-214ENST00000512726 TRAV21A0A0B4J279 112 aa0.42□□□□□ -2.34
RFC1-214ENST00000512726 LOC730098B7Z3J9 87 aa0.42□□□□□ -2.34
RFC1-214ENST00000512726 COL7A1Q02388 2944 aa0.41□□□□□ -2.34
RFC1-214ENST00000512726 HUWE1Q7Z6Z7 4374 aaKnown RBP0.41□□□□□ -2.34
RFC1-214ENST00000512726 NDUFB1O75438 58 aa0.4□□□□□ -2.35
RFC1-214ENST00000512726 HEPN1Q6WQI6 88 aa0.4□□□□□ -2.35
RFC1-214ENST00000512726 WFDC9Q8NEX5 89 aa0.4□□□□□ -2.35
RFC1-214ENST00000512726 POLR1AO95602 1720 aaPredicted RBP0.39□□□□□ -2.35
RFC1-214ENST00000512726 PRM1P04553 51 aa0.39□□□□□ -2.35
RFC1-214ENST00000512726 PREX1Q8TCU6 1659 aa0.39□□□□□ -2.35
RFC1-214ENST00000512726 TIAM2Q8IVF5 1701 aa0.38□□□□□ -2.35
RFC1-214ENST00000512726 URB2Q14146 1524 aaKnown RBP0.38□□□□□ -2.35
RFC1-214ENST00000512726 RGPD8O14715 1765 aaPredicted RBP0.37□□□□□ -2.35
RFC1-214ENST00000512726 RGPD5Q99666 1765 aa0.37□□□□□ -2.35
RFC1-214ENST00000512726 MAP1BP46821 2468 aaKnown RBP0.37□□□□□ -2.35
RFC1-214ENST00000512726 CNOT1A5YKK6 2376 aaKnown RBP0.37□□□□□ -2.35
RFC1-214ENST00000512726 GPR98Q8WXG9 6306 aa0.36□□□□□ -2.35
RFC1-214ENST00000512726 CDKN2A-AS1Q9UH64 79 aa0.36□□□□□ -2.35
RFC1-214ENST00000512726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.36□□□□□ -2.35
RFC1-214ENST00000512726 DCAF1Q9Y4B6 1507 aa0.36□□□□□ -2.35
RFC1-214ENST00000512726 FAT2Q9NYQ8 4349 aa0.36□□□□□ -2.35
RFC1-214ENST00000512726 DIP2BQ9P265 1576 aa0.36□□□□□ -2.35
RFC1-214ENST00000512726 ARHGAP35Q9NRY4 1499 aa0.35□□□□□ -2.35
RFC1-214ENST00000512726 WNK1Q9H4A3 2382 aa0.35□□□□□ -2.35
RFC1-214ENST00000512726 EP300Q09472 2414 aaPredicted RBP0.35□□□□□ -2.35
RFC1-214ENST00000512726 SCRIBQ14160 1630 aa0.35□□□□□ -2.35
RFC1-214ENST00000512726 BSNQ9UPA5 3926 aa0.34□□□□□ -2.35
RFC1-214ENST00000512726 TNXBP22105 4242 aa0.34□□□□□ -2.35
RFC1-214ENST00000512726 USP32Q8NFA0 1604 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms