RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 LINC01561Q8N1V8 128 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 CIRBP-AS1Q8TBR5 109 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 TTTY13Q9BZ97 58 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 PLA2G2DQ9UNK4 145 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
RNF4-217ENST00000511892 A0A0J9YXY3 114 aa3.75□□□□□ -1.81
RNF4-217ENST00000511892 A0A1B0GWB2 263 aa3.75□□□□□ -1.81
RNF4-217ENST00000511892 C9orf118A6NHY6 69 aa3.75□□□□□ -1.81
RNF4-217ENST00000511892 HERV-K104P63124 156 aa3.75□□□□□ -1.81
RNF4-217ENST00000511892 SRSF9Q13242 221 aaKnown RBP eCLIP3.75□□□□□ -1.81
RNF4-217ENST00000511892 LINC00242Q5T6M2 205 aa3.75□□□□□ -1.81
RNF4-217ENST00000511892 COPS9Q8WXC6 57 aa3.75□□□□□ -1.81
RNF4-217ENST00000511892 PPDPFQ9H3Y8 114 aa3.75□□□□□ -1.81
RNF4-217ENST00000511892 TRAV8-4A0A0B4J246 113 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 PANO1I0J062 215 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 NDUFA1O15239 70 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 SLPIP03973 132 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 PLA2G1BP04054 148 aaKnown RBP3.74□□□□□ -1.81
RNF4-217ENST00000511892 IFITM1P13164 125 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 FXYD2P54710 66 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 TSPEAR-AS2P59090 65 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 SDIM1Q6ZPB5 146 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 C9orf163Q8N9P6 203 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 SPANXDQ9BXN6 97 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 SPANXCQ9NY87 97 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 CDKN2A-AS1Q9UH64 79 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 NDUFA12Q9UI09 145 aa3.74□□□□□ -1.81
RNF4-217ENST00000511892 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.73□□□□□ -1.81
RNF4-217ENST00000511892 TRAV13-1A0A0B4J241 112 aa3.73□□□□□ -1.81
RNF4-217ENST00000511892 SMIM1B2RUZ4 78 aa3.73□□□□□ -1.81
RNF4-217ENST00000511892 SPINK8P0C7L1 97 aa3.73□□□□□ -1.81
RNF4-217ENST00000511892 CNBPP62633 177 aaKnown RBP3.73□□□□□ -1.81
RNF4-217ENST00000511892 RPL24P83731 157 aaKnown RBP3.73□□□□□ -1.81
RNF4-217ENST00000511892 UBE2V1Q13404 147 aa3.73□□□□□ -1.81
RNF4-217ENST00000511892 CIRBPQ14011 172 aaKnown RBP3.73□□□□□ -1.81
RNF4-217ENST00000511892 SS18Q15532 418 aa3.73□□□□□ -1.81
RNF4-217ENST00000511892 VAMP3Q15836 100 aa3.73□□□□□ -1.81
RNF4-217ENST00000511892 RNASE13Q5GAN3 156 aaKnown RBP3.73□□□□□ -1.81
RNF4-217ENST00000511892 LYRM7Q5U5X0 104 aa3.73□□□□□ -1.81
RNF4-217ENST00000511892 GTF2H5Q6ZYL4 71 aa3.73□□□□□ -1.81
RNF4-217ENST00000511892 UBR4Q5T4S7 5183 aa3.72□□□□□ -1.81
RNF4-217ENST00000511892 A0A087WZ39 114 aa3.72□□□□□ -1.81
RNF4-217ENST00000511892 A0A0B4J2C4 111 aa3.72□□□□□ -1.81
RNF4-217ENST00000511892 IGKV3OR2-268A0A0C4DH90 116 aa3.72□□□□□ -1.81
RNF4-217ENST00000511892 LINC00959A0A1B0GUT2 108 aa3.72□□□□□ -1.81
RNF4-217ENST00000511892 GAGE12HA6NDE8 117 aa3.72□□□□□ -1.81
RNF4-217ENST00000511892 KRTAP29-1A8MX34 341 aaPredicted RBP3.72□□□□□ -1.81
RNF4-217ENST00000511892 FABP2P12104 132 aa3.72□□□□□ -1.81
RNF4-217ENST00000511892 COX6A2Q02221 97 aa3.72□□□□□ -1.81
RNF4-217ENST00000511892 C15orf56Q8N910 161 aa3.72□□□□□ -1.81
RNF4-217ENST00000511892 NHP2Q9NX24 153 aaKnown RBP3.72□□□□□ -1.81
RNF4-217ENST00000511892 IGHV3-64A0A075B6Q5 118 aa3.71□□□□□ -1.82
RNF4-217ENST00000511892 IGHV3OR16-9A0A0B4J2B5 98 aa3.71□□□□□ -1.82
RNF4-217ENST00000511892 A0A1W2PPM0 123 aa3.71□□□□□ -1.82
RNF4-217ENST00000511892 CXCL5P42830 114 aa3.71□□□□□ -1.82
RNF4-217ENST00000511892 CHCHD10Q8WYQ3 142 aaPredicted RBP3.71□□□□□ -1.82
RNF4-217ENST00000511892 ZNF625Q96I27 306 aaPredicted RBP3.71□□□□□ -1.82
RNF4-217ENST00000511892 LITAFQ99732 161 aa3.71□□□□□ -1.82
RNF4-217ENST00000511892 GAGE10A6NGK3 116 aa3.7□□□□□ -1.82
RNF4-217ENST00000511892 H3BUT2 72 aa3.7□□□□□ -1.82
RNF4-217ENST00000511892 K7EP34 96 aa3.7□□□□□ -1.82
RNF4-217ENST00000511892 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
RNF4-217ENST00000511892 RPL37AP61513 92 aaKnown RBP3.7□□□□□ -1.82
RNF4-217ENST00000511892 FOXI1Q12951 378 aa3.7□□□□□ -1.82
RNF4-217ENST00000511892 CD164L2Q6UWJ8 174 aa3.7□□□□□ -1.82
RNF4-217ENST00000511892 COX7B2Q8TF08 81 aa3.7□□□□□ -1.82
RNF4-217ENST00000511892 A4D1N5 150 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 APOMO95445 188 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 CFC1BP0CG36 223 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 CFC1P0CG37 223 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 HIGD2BQ4VC39 106 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 CFAP161Q6P656 301 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 MUSTN1Q8IVN3 82 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 Q8IZM0 81 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 SPACA4Q8TDM5 124 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 RAB37Q96AX2 223 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 PRO1854Q9UHT4 67 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 SPCS1Q9Y6A9 102 aa3.69□□□□□ -1.82
RNF4-217ENST00000511892 TRBV20-1A0A075B6N2 111 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 A0A087WYN8 130 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 GVQW2A0A096LPI5 108 aaPredicted RBP3.68□□□□□ -1.82
RNF4-217ENST00000511892 K7ERJ3 54 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 COX7A2LO14548 114 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 OXTP01178 125 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 PRSS2P07478 247 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 XCL1P47992 114 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 MEIG1Q5JSS6 88 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 LINC00526Q96FQ7 95 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 PLAC8Q9NZF1 115 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 ERG28Q9UKR5 140 aa3.68□□□□□ -1.82
RNF4-217ENST00000511892 F8WDY8 70 aa3.67□□□□□ -1.82
RNF4-217ENST00000511892 TSPAN13O95857 204 aa3.67□□□□□ -1.82
RNF4-217ENST00000511892 MALP21145 153 aa3.67□□□□□ -1.82
RNF4-217ENST00000511892 C6orf226Q5I0X4 101 aa3.67□□□□□ -1.82
RNF4-217ENST00000511892 ADAMTSL4-AS1Q5T5F5 129 aa3.67□□□□□ -1.82
RNF4-217ENST00000511892 C5orf38Q86SI9 138 aa3.67□□□□□ -1.82
RNF4-217ENST00000511892 LINC00308Q8TCZ7 52 aa3.67□□□□□ -1.82
RNF4-217ENST00000511892 A0A096LNI7 61 aa3.66□□□□□ -1.82
RNF4-217ENST00000511892 IGKV2-24A0A0C4DH68 120 aa3.66□□□□□ -1.82
RNF4-217ENST00000511892 TRBV30A0A0K0K1B3 111 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms