RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 DAND5Q8N907 189 aa2.78□□□□□ -1.96
CPNE4-204ENST00000505331 C20orf203Q8NBC4 194 aa2.78□□□□□ -1.96
CPNE4-204ENST00000505331 RPL39LQ96EH5 51 aaKnown RBP2.78□□□□□ -1.96
CPNE4-204ENST00000505331 C9orf85Q96MD7 179 aa2.78□□□□□ -1.96
CPNE4-204ENST00000505331 TIMM21Q9BVV7 248 aa2.78□□□□□ -1.96
CPNE4-204ENST00000505331 ICOSQ9Y6W8 199 aa2.78□□□□□ -1.96
CPNE4-204ENST00000505331 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 TRAV4A0A0B4J268 109 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 H3BNG1 76 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 M0QY20 66 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 UQCRQO14949 82 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 TRIAP1O43715 76 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 TRACP01848 142 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 TSPEAR-AS2P59090 65 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 RPL11P62913 178 aaKnown RBP2.77□□□□□ -1.97
CPNE4-204ENST00000505331 IGFL4Q6B9Z1 124 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 SUMO4Q6EEV6 95 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 SFTA2Q6UW10 78 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 SDIM1Q6ZPB5 146 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 MUSTN1Q8IVN3 82 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 DNAJC30Q96LL9 226 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 KRTAP9-8Q9BYQ0 159 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 SS18L2Q9UHA2 77 aa2.77□□□□□ -1.97
CPNE4-204ENST00000505331 IGLV4-3A0A075B6K6 122 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 IGLV5-45A0A087WSX0 123 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 IGHV3-49A0A0A0MS15 119 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 IGHV3-16A0A0C4DH30 117 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 TEX49A0A1B0GTD5 131 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 F5H697 171 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 H7C423 109 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 K7EQG2 157 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 ATOX1O00244 68 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 COX7A2LO14548 114 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 NDUFA1O15239 70 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 IGHV3-30-3P0DP02 117 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 LINC01547P58512 204 aaPredicted RBP2.76□□□□□ -1.97
CPNE4-204ENST00000505331 TIRAPP58753 221 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 SNRPD3P62318 126 aaKnown RBP2.76□□□□□ -1.97
CPNE4-204ENST00000505331 HERV-K104P63124 156 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 MEIG1Q5JSS6 88 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 PRR9Q5T870 116 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 FAM19A3Q7Z5A8 133 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 VSIG2Q96IQ7 327 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 LITAFQ99732 161 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 NDUFA12Q9UI09 145 aa2.76□□□□□ -1.97
CPNE4-204ENST00000505331 IGHV3OR16-13A0A075B7E8 117 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 IGHV3-74A0A0B4J1X5 117 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 CCDC179H3BU77 68 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 J3KT08 172 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 CRYGAP11844 174 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 HERVK_113P63121 156 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 ZNF56Q15929 161 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 C3orf22Q8N5N4 141 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 LINC00526Q96FQ7 95 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 LINC00467Q9BRT7 94 aa2.75□□□□□ -1.97
CPNE4-204ENST00000505331 CSDC2Q9Y534 153 aaKnown RBP2.75□□□□□ -1.97
CPNE4-204ENST00000505331 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
CPNE4-204ENST00000505331 IGHV1OR15-1A0A075B7D0 117 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 TRAV13-2A0A0B4J235 113 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 IGHV3-66A0A0C4DH42 116 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 A8MTW9 85 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 GNRH2O43555 120 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 PRSS2P07478 247 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 RPL39P62891 51 aaKnown RBP2.74□□□□□ -1.97
CPNE4-204ENST00000505331 S100A7L2Q5SY68 101 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 ATP5EP2Q5VTU8 51 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 C5orf38Q86SI9 138 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 SMIM20Q8N5G0 67 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 DCANP1Q8TF63 244 aa2.74□□□□□ -1.97
CPNE4-204ENST00000505331 A0A087WWL8 130 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 A0A096LPF7 62 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 IGLV5-39A0A0G2JS06 123 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 TRBV10-1A0A0K0K1A3 114 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 FAM236AA0A1B0GUQ0 79 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 FAM236BA0A1B0GV22 79 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 NDUFC2-KCTD14E9PQ53 114 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 H0YGX0 51 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 BCE1O60756 84 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 COX7CP15954 63 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 TMEM258P61165 79 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 HIST1H4AP62805 103 aaKnown RBP2.73□□□□□ -1.97
CPNE4-204ENST00000505331 C5orf47Q569G3 176 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 C9orf153Q5TBE3 101 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 C1orf158Q8N1D5 194 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 OR13C6PQ8NH95 151 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 LINC01587Q99440 93 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 SPXQ9BT56 116 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 UBE2D4Q9Y2X8 147 aa2.73□□□□□ -1.97
CPNE4-204ENST00000505331 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.72□□□□□ -1.97
CPNE4-204ENST00000505331 TRAV12-3A0A0B4J271 114 aa2.72□□□□□ -1.97
CPNE4-204ENST00000505331 H7C2G1 150 aa2.72□□□□□ -1.97
CPNE4-204ENST00000505331 IGHV3-53P01767 116 aa2.72□□□□□ -1.97
CPNE4-204ENST00000505331 RPL28P46779 137 aaKnown RBP2.72□□□□□ -1.97
CPNE4-204ENST00000505331 FAM74A4Q5TZK3 123 aa2.72□□□□□ -1.97
CPNE4-204ENST00000505331 Q6ZQT7 251 aa2.72□□□□□ -1.97
CPNE4-204ENST00000505331 LINC00308Q8TCZ7 52 aa2.72□□□□□ -1.97
CPNE4-204ENST00000505331 TRAV8-3A0A0A6YYJ7 113 aa2.71□□□□□ -1.98
CPNE4-204ENST00000505331 TRBV10-3A0A0K0K1G6 114 aa2.71□□□□□ -1.98
CPNE4-204ENST00000505331 H3BQ85 93 aa2.71□□□□□ -1.98
CPNE4-204ENST00000505331 J3KRW8 73 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms