RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 MDC1Q14676 2089 aaKnown RBP1.5□□□□□ -2.17
LINC01088-202ENST00000505149 OTOGLQ3ZCN5 2332 aa1.5□□□□□ -2.17
LINC01088-202ENST00000505149 FMN2Q9NZ56 1722 aa1.49□□□□□ -2.17
LINC01088-202ENST00000505149 DEPDC5O75140 1603 aa1.49□□□□□ -2.17
LINC01088-202ENST00000505149 INE1O15225 51 aa1.49□□□□□ -2.17
LINC01088-202ENST00000505149 COX7BP24311 80 aa1.49□□□□□ -2.17
LINC01088-202ENST00000505149 CACNA1DQ01668 2161 aa1.49□□□□□ -2.17
LINC01088-202ENST00000505149 ESPL1Q14674 2120 aa1.49□□□□□ -2.17
LINC01088-202ENST00000505149 CR1P17927 2039 aa1.49□□□□□ -2.17
LINC01088-202ENST00000505149 TIAM2Q8IVF5 1701 aa1.49□□□□□ -2.17
LINC01088-202ENST00000505149 C5P01031 1676 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 COL4A1P02462 1669 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 SCN7AQ01118 1682 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 DNAJC13O75165 2243 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 NRXN3Q9Y4C0 1643 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 TET1Q8NFU7 2136 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 SAMD9LQ8IVG5 1584 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 NCR3O14931 201 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 RPL38P63173 70 aaKnown RBP1.48□□□□□ -2.17
LINC01088-202ENST00000505149 COL14A1Q05707 1796 aaKnown RBP1.48□□□□□ -2.17
LINC01088-202ENST00000505149 RP1P56715 2156 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 MED12Q93074 2177 aa1.48□□□□□ -2.17
LINC01088-202ENST00000505149 PAPPA2Q9BXP8 1791 aa1.47□□□□□ -2.17
LINC01088-202ENST00000505149 ANKRD36A6QL64 1941 aa1.47□□□□□ -2.17
LINC01088-202ENST00000505149 M0R2N4 97 aa1.47□□□□□ -2.17
LINC01088-202ENST00000505149 PIN1P1O15428 100 aa1.47□□□□□ -2.17
LINC01088-202ENST00000505149 KCNQ1DNQ9H478 68 aa1.47□□□□□ -2.17
LINC01088-202ENST00000505149 ZFHX3Q15911 3703 aa1.47□□□□□ -2.17
LINC01088-202ENST00000505149 ABCA4P78363 2273 aa1.47□□□□□ -2.17
LINC01088-202ENST00000505149 ARFGEF3Q5TH69 2177 aa1.47□□□□□ -2.17
LINC01088-202ENST00000505149 PCDH15Q96QU1 1955 aa1.47□□□□□ -2.17
LINC01088-202ENST00000505149 PARP4Q9UKK3 1724 aaKnown RBP1.46□□□□□ -2.18
LINC01088-202ENST00000505149 ZNF831Q5JPB2 1677 aa1.46□□□□□ -2.18
LINC01088-202ENST00000505149 UNC13CQ8NB66 2214 aa1.46□□□□□ -2.18
LINC01088-202ENST00000505149 TNRC6BQ9UPQ9 1833 aaKnown RBP1.46□□□□□ -2.18
LINC01088-202ENST00000505149 MRPL33O75394 65 aaKnown RBP1.46□□□□□ -2.18
LINC01088-202ENST00000505149 Q6ZQY7 126 aa1.46□□□□□ -2.18
LINC01088-202ENST00000505149 SSBP3-AS1Q7Z2R9 100 aa1.46□□□□□ -2.18
LINC01088-202ENST00000505149 CCL19Q99731 98 aa1.46□□□□□ -2.18
LINC01088-202ENST00000505149 DLEC1Q9Y238 1755 aa1.46□□□□□ -2.18
LINC01088-202ENST00000505149 ARHGAP32A7KAX9 2087 aa1.46□□□□□ -2.18
LINC01088-202ENST00000505149 DOT1LQ8TEK3 1739 aa1.46□□□□□ -2.18
LINC01088-202ENST00000505149 GCC2Q8IWJ2 1684 aa1.45□□□□□ -2.18
LINC01088-202ENST00000505149 SDK1Q7Z5N4 2213 aa1.45□□□□□ -2.18
LINC01088-202ENST00000505149 LY75O60449 1722 aa1.45□□□□□ -2.18
LINC01088-202ENST00000505149 QSER1Q2KHR3 1735 aa1.45□□□□□ -2.18
LINC01088-202ENST00000505149 COL4A5P29400 1685 aa1.45□□□□□ -2.18
LINC01088-202ENST00000505149 IQGAP1P46940 1657 aa1.45□□□□□ -2.18
LINC01088-202ENST00000505149 PRR14LQ5THK1 2151 aa1.44□□□□□ -2.18
LINC01088-202ENST00000505149 DOCK10Q96BY6 2186 aa1.44□□□□□ -2.18
LINC01088-202ENST00000505149 DDX60LQ5H9U9 1706 aaKnown RBP1.44□□□□□ -2.18
LINC01088-202ENST00000505149 CPSF4LA6NMK7 179 aaKnown RBP1.44□□□□□ -2.18
LINC01088-202ENST00000505149 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.44□□□□□ -2.18
LINC01088-202ENST00000505149 Q6ZRX8 168 aa1.44□□□□□ -2.18
LINC01088-202ENST00000505149 BCORQ6W2J9 1755 aa1.44□□□□□ -2.18
LINC01088-202ENST00000505149 DEFB131BA0A096LNP1 70 aa1.43□□□□□ -2.18
LINC01088-202ENST00000505149 SMIM11BQ8TCY0 68 aa1.43□□□□□ -2.18
LINC01088-202ENST00000505149 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
LINC01088-202ENST00000505149 NCOA6Q14686 2063 aaPredicted RBP1.43□□□□□ -2.18
LINC01088-202ENST00000505149 E9PCH4 1651 aa1.42□□□□□ -2.18
LINC01088-202ENST00000505149 SPTY2D1-AS1A0A0U1RR47 76 aa1.42□□□□□ -2.18
LINC01088-202ENST00000505149 CRIP1P50238 77 aa1.42□□□□□ -2.18
LINC01088-202ENST00000505149 NRAPQ86VF7 1730 aa1.42□□□□□ -2.18
LINC01088-202ENST00000505149 DDX60Q8IY21 1712 aaKnown RBP1.42□□□□□ -2.18
LINC01088-202ENST00000505149 DUOX1Q9NRD9 1551 aa1.42□□□□□ -2.18
LINC01088-202ENST00000505149 LY6G6CO95867 125 aa1.41□□□□□ -2.18
LINC01088-202ENST00000505149 PRB1P04280 392 aa1.41□□□□□ -2.18
LINC01088-202ENST00000505149 LINC00158P58513 81 aa1.41□□□□□ -2.18
LINC01088-202ENST00000505149 C10orf99Q6UWK7 81 aa1.41□□□□□ -2.18
LINC01088-202ENST00000505149 SMIM2Q9BVW6 85 aa1.41□□□□□ -2.18
LINC01088-202ENST00000505149 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
LINC01088-202ENST00000505149 GVQW2A0A096LPI5 108 aaPredicted RBP1.4□□□□□ -2.19
LINC01088-202ENST00000505149 G3V318 75 aa1.4□□□□□ -2.19
LINC01088-202ENST00000505149 ANGP03950 147 aaKnown RBP1.4□□□□□ -2.19
LINC01088-202ENST00000505149 LINC00308Q8TCZ7 52 aa1.4□□□□□ -2.19
LINC01088-202ENST00000505149 MUC6Q6W4X9 2439 aa1.4□□□□□ -2.19
LINC01088-202ENST00000505149 A0A096LNT2 108 aa1.39□□□□□ -2.19
LINC01088-202ENST00000505149 IAPPP10997 89 aa1.39□□□□□ -2.19
LINC01088-202ENST00000505149 TFF3Q07654 80 aa1.39□□□□□ -2.19
LINC01088-202ENST00000505149 Q6ZRN7 208 aaPredicted RBP1.39□□□□□ -2.19
LINC01088-202ENST00000505149 C4AP0C0L4 1744 aa1.38□□□□□ -2.19
LINC01088-202ENST00000505149 SPINK13Q1W4C9 94 aa1.38□□□□□ -2.19
LINC01088-202ENST00000505149 Q8IZM0 81 aa1.38□□□□□ -2.19
LINC01088-202ENST00000505149 CNFNQ9BYD5 112 aa1.38□□□□□ -2.19
LINC01088-202ENST00000505149 KRTAP4-1Q9BYQ7 146 aa1.38□□□□□ -2.19
LINC01088-202ENST00000505149 CDKN2A-AS1Q9UH64 79 aa1.38□□□□□ -2.19
LINC01088-202ENST00000505149 ZFHX2Q9C0A1 2572 aaPredicted RBP1.38□□□□□ -2.19
LINC01088-202ENST00000505149 TNCP24821 2201 aa1.38□□□□□ -2.19
LINC01088-202ENST00000505149 LRRC37A2A6NM11 1700 aa1.37□□□□□ -2.19
LINC01088-202ENST00000505149 TOGARAM1Q9Y4F4 1720 aa1.37□□□□□ -2.19
LINC01088-202ENST00000505149 ALPK2Q86TB3 2170 aa1.37□□□□□ -2.19
LINC01088-202ENST00000505149 CEP192Q8TEP8 1941 aa1.37□□□□□ -2.19
LINC01088-202ENST00000505149 NDUFA1O15239 70 aa1.37□□□□□ -2.19
LINC01088-202ENST00000505149 ARHGAP5-AS1Q96IT6 56 aa1.37□□□□□ -2.19
LINC01088-202ENST00000505149 CRIPTQ9P021 101 aa1.37□□□□□ -2.19
LINC01088-202ENST00000505149 COL4A2P08572 1712 aa1.37□□□□□ -2.19
LINC01088-202ENST00000505149 BRWD1Q9NSI6 2320 aa1.37□□□□□ -2.19
LINC01088-202ENST00000505149 LMO7Q8WWI1 1683 aa1.36□□□□□ -2.19
LINC01088-202ENST00000505149 FREM1Q5H8C1 2179 aa1.36□□□□□ -2.19
LINC01088-202ENST00000505149 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms