RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 IGKV3D-7A0A0C4DH55 119 aa4.5□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 DNAL4O96015 105 aa4.5□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 FAM222AQ5U5X8 452 aa4.5□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 SMIM20Q8N5G0 67 aa4.5□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 PRR26Q8N8Z3 221 aa4.5□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 Q8NDZ9 215 aa4.49□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 LINC00846Q9NV44 126 aa4.49□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 CMC4P56277 68 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 NANOS2P60321 138 aaKnown RBP4.49□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 LINC00269Q8N2A0 174 aa4.49□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 LINC00526Q96FQ7 95 aa4.49□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 CMYA5Q8N3K9 4069 aa4.49□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 INAFM2P0DMQ5 153 aa4.48□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 SS18Q15532 418 aa4.48□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 PPDPFQ9H3Y8 114 aa4.48□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 KLK5Q9Y337 293 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 A0A087WVE0 104 aa4.48□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 H0YGX0 51 aa4.48□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 IGHV4-30-4P0DP06 118 aa4.48□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 IMUPQ9GZP8 106 aa4.48□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 CXCL5P42830 114 aa4.47□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 KIAA0087Q14695 138 aa4.47□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 C6orf223Q8N319 242 aa4.47□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 OBSCN-AS1Q96MR7 158 aa4.47□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 KIR2DL5BQ8NHK3 375 aa4.47□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 PKD1L1Q8TDX9 2849 aa4.46□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 IGLV5-52A0A0A0MRZ9 124 aa4.46□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 DEFB135Q30KP9 77 aa4.46□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 Q8IZM0 81 aa4.46□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 LINC00612Q8N6U2 182 aa4.46□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 CYSTM1Q9H1C7 97 aa4.46□□□□□ -1.69
NPHP3-AS1-202ENST00000504440 A0A1B0GUV1 79 aa4.46□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 ANGP03950 147 aaKnown RBP4.46□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 C9orf153Q5TBE3 101 aa4.46□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 C3orf22Q8N5N4 141 aa4.46□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 WFDC9Q8NEX5 89 aa4.46□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 CHCHD10Q8WYQ3 142 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 C2orf48Q96LS8 159 aa4.46□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 PRO0255Q9UI72 69 aa4.46□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 CELA1Q9UNI1 258 aa4.45□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 HTN3P15516 51 aa4.45□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 UNQ6190/PRO20217Q6UXQ8 127 aa4.45□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 Q8N814 137 aa4.45□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 ORMDL1Q9P0S3 153 aa4.45□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 REG3AQ06141 175 aa4.44□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 KRTAP24-1Q3LI83 254 aa4.44□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 C6orf99Q4VX62 202 aa4.44□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 CD164L2Q6UWJ8 174 aa4.44□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 LINC01561Q8N1V8 128 aa4.44□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 hADV29S1A0JD25 119 aa4.43□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 HIST1H4AP62805 103 aaKnown RBP4.43□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 KRTAP21-3Q3LHN1 58 aa4.43□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 LOC107984640A0A0U1RRK4 108 aa4.43□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 A0A1B0GX51 115 aa4.43□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 M0R2N4 97 aa4.43□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 UQCRQO14949 82 aa4.43□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 CCKP06307 115 aa4.43□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 COX7CP15954 63 aa4.42□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 Q6JHZ5 121 aa4.42□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 FAM19A1Q7Z5A9 133 aa4.42□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 LINC00167Q96N53 147 aa4.42□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 DAD1P61803 113 aa4.41□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 RPL18AQ02543 176 aaKnown RBP4.41□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 TMEM126AQ9H061 195 aa4.41□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 KLK12Q9UKR0 248 aa4.41□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 S100A7L2Q5SY68 101 aa4.41□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 SMIM9A6NGZ8 99 aa4.4□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 NDUFC2O95298 119 aa4.4□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 SPAG11BQ08648 103 aa4.4□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 LINC00575Q6W349 94 aa4.4□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 XAGE1AQ9HD64 81 aa4.4□□□□□ -1.7
NPHP3-AS1-202ENST00000504440 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 LYRM9A8MSI8 78 aa4.4□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 ATOX1O00244 68 aa4.4□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 ENHOQ6UWT2 76 aa4.4□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 NBEAL1Q6ZS30 2694 aa4.39□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 TRAV23DV6A0A075B6W5 121 aa4.39□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 TMEM256-PLSCR3K7ERE1 68 aa4.39□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 COX17Q14061 63 aa4.39□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 Q8NAQ8 132 aa4.39□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 MGAM2Q2M2H8 2515 aa4.38□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 CRYGAP11844 174 aa4.38□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 UPK3BQ9BT76 320 aa4.38□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 JMJD7-PLA2G4BH0Y9G9 81 aa4.38□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 LAMTOR3Q9UHA4 124 aa4.38□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 TRBV10-3A0A0K0K1G6 114 aa4.37□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 HIGD2BQ4VC39 106 aa4.37□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 C9orf66Q5T8R8 295 aa4.37□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 Q6ZQY7 126 aa4.37□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 SERP2Q8N6R1 65 aa4.37□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 C6orf48Q9UBA6 75 aa4.37□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 F8WDY8 70 aa4.37□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 LELP1Q5T871 98 aa4.37□□□□□ -1.71
NPHP3-AS1-202ENST00000504440 Q6ZQT0 140 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms