RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PRR3P79522 188 aaKnown RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 SOSTDC1Q6X4U4 206 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 Q6ZTC4 211 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 C18orf65Q6ZTR6 163 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 PHF5AQ7RTV0 110 aaKnown RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 WFDC10BQ8IUB3 73 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 OBSCN-AS1Q96MR7 158 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 LITAFQ99732 161 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 UBE2D4Q9Y2X8 147 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 KLLNB2CW77 178 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 USP17L23D6RBM5 183 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 F8W735 103 aaPredicted RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 H3BUA1 57 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 TMEM256-PLSCR3K7ERE1 68 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 IGKV4-1P06312 121 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 RNASE3P12724 160 aaKnown RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 Q6ZQY7 126 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 LINC00337Q8N6G1 96 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 CELA1Q9UNI1 258 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 TRBV10-1A0A0K0K1A3 114 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 UBE2AP49459 152 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 WFDC13Q8IUB5 93 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 C16orf74Q96GX8 76 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 PRO0255Q9UI72 69 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 COX7BP24311 80 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 CHCHD10Q8WYQ3 142 aaPredicted RBP2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 SMIM26A0A096LP01 95 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 TRBV6-5A0A0K0K1A5 114 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 PLAC8L1A1L4L8 177 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 K7EQG2 157 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 NDUFB1O75438 58 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 IGHV4-30-4P0DP06 118 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 IGHV4-31P0DP07 118 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 REG3AQ06141 175 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 NDUFC2O95298 119 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 CCL18P55774 89 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 C9orf116Q5BN46 136 aaPredicted RBP2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 TRRAPQ9Y4A5 3859 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 INAFM1C9JVW0 142 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 RPL28P46779 137 aaKnown RBP2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 SPINK6Q6UWN8 80 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 TEX15Q9BXT5 2789 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 A6NDX4 124 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 IGIPA6NJ69 53 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 C11orf71Q6IPW1 123 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 SMIM11BQ8TCY0 68 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 TRBV30A0A0K0K1B3 111 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 A8MTW9 85 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 POLR2KP53803 58 aaKnown RBP2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 DEFB114Q30KQ6 69 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 TRBV27A0A0K0K1C4 114 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 RPL37AP8A6NKH3 93 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 TSHBP01222 138 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 LST1O00453 97 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 TIMM17BO60830 172 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 LY6G6DO95868 133 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 MED14OSP0DP75 135 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 RMI2Q96E14 147 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 SPANXDQ9BXN6 97 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 ZANQ9Y493 2812 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 IGLV4-69A0A075B6H9 119 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 A0A087WZ39 114 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 ODF3BA8MYP8 253 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 Q1T7F1 81 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 LINC00574Q9H8X3 128 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 HRNRQ86YZ3 2850 aaPredicted RBP2.59□□□□□ -2
PCDH11X-208ENST00000504220 TRBV6-8A0A0A6YYG3 113 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 TRBV7-4A0A0J9YYF1 115 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 DNAJC9-AS1A6NH13 148 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 C9orf66Q5T8R8 295 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 APCP25054 2843 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 STAB2Q8WWQ8 2551 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 KRTAP3-3Q9BYR6 98 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 KRTAP3-2Q9BYR7 98 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 FAM30AQ9NZY2 134 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 DEFB116Q30KQ4 102 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 OXLD1Q5BKU9 147 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 UNQ6190/PRO20217Q6UXQ8 127 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 FAM104AQ969W3 186 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 COX6A2Q02221 97 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 LCA10Q71F78 164 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 KRTAP1-3Q8IUG1 177 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 DMBT1Q9UGM3 2413 aaPredicted RBP2.57□□□□□ -2
PCDH11X-208ENST00000504220 FBN1P35555 2871 aaKnown RBP2.57□□□□□ -2
PCDH11X-208ENST00000504220 C16orf90A8MZG2 172 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 M0R2N4 97 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 LINC00242Q5T6M2 205 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 C19orf73Q9NVV2 129 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 ZNF469Q96JG9 3925 aaPredicted RBP2.57□□□□□ -2
PCDH11X-208ENST00000504220 A6NED7 52 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 A8MUN3 132 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 FAM19A3Q7Z5A8 133 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 MRPL55Q7Z7F7 128 aaKnown RBP2.57□□□□□ -2
PCDH11X-208ENST00000504220 IGLV4-60A0A075B6I1 120 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 DEFB131BA0A096LNP1 70 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 PSPHP1O15172 72 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 Q8N9L7 120 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 C4orf3Q8WVX3 66 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms