RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PRR3P79522 188 aaKnown RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 SOSTDC1Q6X4U4 206 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 Q6ZTC4 211 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 C18orf65Q6ZTR6 163 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 PHF5AQ7RTV0 110 aaKnown RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 WFDC10BQ8IUB3 73 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 OBSCN-AS1Q96MR7 158 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 LITAFQ99732 161 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 UBE2D4Q9Y2X8 147 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 KLLNB2CW77 178 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 USP17L23D6RBM5 183 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 F8W735 103 aaPredicted RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 H3BUA1 57 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 TMEM256-PLSCR3K7ERE1 68 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 IGKV4-1P06312 121 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 RNASE3P12724 160 aaKnown RBP2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 Q6ZQY7 126 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 LINC00337Q8N6G1 96 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 CELA1Q9UNI1 258 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 TRBV10-1A0A0K0K1A3 114 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 UBE2AP49459 152 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 WFDC13Q8IUB5 93 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 C16orf74Q96GX8 76 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 PRO0255Q9UI72 69 aa2.62□□□□□ -1.99
PCDH11X-208ENST00000504220 COX7BP24311 80 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 CHCHD10Q8WYQ3 142 aaPredicted RBP2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 SMIM26A0A096LP01 95 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 TRBV6-5A0A0K0K1A5 114 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 PLAC8L1A1L4L8 177 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 K7EQG2 157 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 NDUFB1O75438 58 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 IGHV4-30-4P0DP06 118 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 IGHV4-31P0DP07 118 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 REG3AQ06141 175 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 NDUFC2O95298 119 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 CCL18P55774 89 aa2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 C9orf116Q5BN46 136 aaPredicted RBP2.61□□□□□ -1.99
PCDH11X-208ENST00000504220 TRRAPQ9Y4A5 3859 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 INAFM1C9JVW0 142 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 RPL28P46779 137 aaKnown RBP2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 SPINK6Q6UWN8 80 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 TEX15Q9BXT5 2789 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 A6NDX4 124 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 IGIPA6NJ69 53 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 C11orf71Q6IPW1 123 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 SMIM11BQ8TCY0 68 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 TRBV30A0A0K0K1B3 111 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 A8MTW9 85 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 POLR2KP53803 58 aaKnown RBP2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 DEFB114Q30KQ6 69 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
PCDH11X-208ENST00000504220 TRBV27A0A0K0K1C4 114 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 RPL37AP8A6NKH3 93 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 TSHBP01222 138 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 LST1O00453 97 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 TIMM17BO60830 172 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 LY6G6DO95868 133 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 MED14OSP0DP75 135 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 RMI2Q96E14 147 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 SPANXDQ9BXN6 97 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 ZANQ9Y493 2812 aa2.59□□□□□ -1.99
PCDH11X-208ENST00000504220 IGLV4-69A0A075B6H9 119 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 A0A087WZ39 114 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 ODF3BA8MYP8 253 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 Q1T7F1 81 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 LINC00574Q9H8X3 128 aa2.59□□□□□ -2
PCDH11X-208ENST00000504220 HRNRQ86YZ3 2850 aaPredicted RBP2.59□□□□□ -2
PCDH11X-208ENST00000504220 TRBV6-8A0A0A6YYG3 113 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 TRBV7-4A0A0J9YYF1 115 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 DNAJC9-AS1A6NH13 148 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 C9orf66Q5T8R8 295 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 APCP25054 2843 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 STAB2Q8WWQ8 2551 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 KRTAP3-3Q9BYR6 98 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 KRTAP3-2Q9BYR7 98 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 FAM30AQ9NZY2 134 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 DEFB116Q30KQ4 102 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 OXLD1Q5BKU9 147 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 UNQ6190/PRO20217Q6UXQ8 127 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 FAM104AQ969W3 186 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 COX6A2Q02221 97 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 LCA10Q71F78 164 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 KRTAP1-3Q8IUG1 177 aa2.58□□□□□ -2
PCDH11X-208ENST00000504220 DMBT1Q9UGM3 2413 aaPredicted RBP2.57□□□□□ -2
PCDH11X-208ENST00000504220 FBN1P35555 2871 aaKnown RBP2.57□□□□□ -2
PCDH11X-208ENST00000504220 C16orf90A8MZG2 172 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 M0R2N4 97 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 LINC00242Q5T6M2 205 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 C19orf73Q9NVV2 129 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 ZNF469Q96JG9 3925 aaPredicted RBP2.57□□□□□ -2
PCDH11X-208ENST00000504220 A6NED7 52 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 A8MUN3 132 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 FAM19A3Q7Z5A8 133 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 MRPL55Q7Z7F7 128 aaKnown RBP2.57□□□□□ -2
PCDH11X-208ENST00000504220 IGLV4-60A0A075B6I1 120 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 DEFB131BA0A096LNP1 70 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 PSPHP1O15172 72 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 Q8N9L7 120 aa2.57□□□□□ -2
PCDH11X-208ENST00000504220 C4orf3Q8WVX3 66 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms