RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 TSHBP01222 138 aa3.89□□□□□ -1.79
CACNA1C-229ENST00000496818 CRYGDP07320 174 aa3.89□□□□□ -1.79
CACNA1C-229ENST00000496818 CXCL5P42830 114 aa3.89□□□□□ -1.79
CACNA1C-229ENST00000496818 LINC01620Q4KN68 170 aa3.89□□□□□ -1.79
CACNA1C-229ENST00000496818 C11orf72Q8NBR9 251 aa3.89□□□□□ -1.79
CACNA1C-229ENST00000496818 PTH2Q96A98 100 aa3.89□□□□□ -1.79
CACNA1C-229ENST00000496818 PKD1P98161 4303 aa3.89□□□□□ -1.79
CACNA1C-229ENST00000496818 NACAE9PAV3 2078 aa3.88□□□□□ -1.79
CACNA1C-229ENST00000496818 LRP1BQ9NZR2 4599 aa3.88□□□□□ -1.79
CACNA1C-229ENST00000496818 A0A1B0GX51 115 aa3.88□□□□□ -1.79
CACNA1C-229ENST00000496818 C9JAW5 83 aa3.88□□□□□ -1.79
CACNA1C-229ENST00000496818 FUSP35637 526 aaKnown RBP eCLIP3.88□□□□□ -1.79
CACNA1C-229ENST00000496818 KRTAP10-1P60331 282 aa3.88□□□□□ -1.79
CACNA1C-229ENST00000496818 ZNF56Q15929 161 aa3.88□□□□□ -1.79
CACNA1C-229ENST00000496818 Q75L30 129 aa3.88□□□□□ -1.79
CACNA1C-229ENST00000496818 JPT2Q9H910 190 aa3.88□□□□□ -1.79
CACNA1C-229ENST00000496818 DNAH17Q9UFH2 4485 aa3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 TMEM223A0PJW6 202 aa3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 I3L3M4 83 aa3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 K7EQD1 137 aa3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 UQCRQO14949 82 aa3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 ZNF22P17026 224 aaPredicted RBP3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 RPS28P62857 69 aaKnown RBP3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 LYPD5Q6UWN5 251 aa3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 LINC00643Q86TS7 51 aa3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 WFDC10BQ8IUB3 73 aa3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 AMELXQ99217 191 aa3.87□□□□□ -1.79
CACNA1C-229ENST00000496818 A4D1N5 150 aa3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 LST1O00453 97 aa3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 SMR3BP02814 79 aaPredicted RBP3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 RPL39P62891 51 aaKnown RBP3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 HAMPP81172 84 aa3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 MRPS36P82909 103 aaKnown RBP3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 CIRBPQ14011 172 aaKnown RBP3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 Q1RN00 199 aa3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 FAM74A4Q5TZK3 123 aa3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 C2orf82Q6UX34 121 aa3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 DAND5Q8N907 189 aa3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 Q8N9P0 234 aaPredicted RBP3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 C20orf203Q8NBC4 194 aa3.86□□□□□ -1.79
CACNA1C-229ENST00000496818 APOBP04114 4563 aaKnown RBP3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 IGHV3-38A0A0C4DH36 116 aa3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 TRACP01848 142 aa3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 MIAQ16674 131 aa3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 SFTA2Q6UW10 78 aa3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 SDIM1Q6ZPB5 146 aa3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 Q8N814 137 aa3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 DNAJC30Q96LL9 226 aa3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 TNFRSF18Q9Y5U5 241 aa3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 MUC4Q99102 2169 aa3.85□□□□□ -1.79
CACNA1C-229ENST00000496818 IGLV4-3A0A075B6K6 122 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 TRAV4A0A0B4J268 109 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 IGHV1-58A0A0C4DH39 117 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 TINCRA0A1B0GVN0 87 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 ATOX1O00244 68 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 TSPEAR-AS2P59090 65 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 LINC01556Q5JQF7 62 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 GAGE2AQ6NT46 116 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 DEFB104AQ8WTQ1 72 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 SPXQ9BT56 116 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 TIMM21Q9BVV7 248 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 Q9HAA7 133 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 SS18L2Q9UHA2 77 aa3.84□□□□□ -1.79
CACNA1C-229ENST00000496818 DNAH5Q8TE73 4624 aa3.83□□□□□ -1.8
CACNA1C-229ENST00000496818 IGKV2D-30A0A075B6S6 120 aa3.83□□□□□ -1.8
CACNA1C-229ENST00000496818 J3KT08 172 aa3.83□□□□□ -1.8
CACNA1C-229ENST00000496818 RS1O15537 224 aa3.83□□□□□ -1.8
CACNA1C-229ENST00000496818 HERV-K104P63124 156 aa3.83□□□□□ -1.8
CACNA1C-229ENST00000496818 MEIG1Q5JSS6 88 aa3.83□□□□□ -1.8
CACNA1C-229ENST00000496818 S100A7L2Q5SY68 101 aa3.83□□□□□ -1.8
CACNA1C-229ENST00000496818 C3orf22Q8N5N4 141 aa3.83□□□□□ -1.8
CACNA1C-229ENST00000496818 LINC00526Q96FQ7 95 aa3.83□□□□□ -1.8
CACNA1C-229ENST00000496818 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 LRCOL1A6NCL2 159 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 KRTAP29-1A8MX34 341 aaPredicted RBP3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 IBA57-AS1B1ANH7 110 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 H7C423 109 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 NDUFA1O15239 70 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 CRYGAP11844 174 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 FAM19A3Q7Z5A8 133 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 MUSTN1Q8IVN3 82 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 FAM104AQ969W3 186 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 OPRPNQ99935 248 aaPredicted RBP3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 CHCHD7Q9BUK0 85 aa3.82□□□□□ -1.8
CACNA1C-229ENST00000496818 TRAV8-3A0A0A6YYJ7 113 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 A0A0J9YXV3 536 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 LOC100131303A0A0U1RQF7 123 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 NDUFC2-KCTD14E9PQ53 114 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 COX7A2LO14548 114 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 BCE1O60756 84 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 IGHV3-30-3P0DP02 117 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 TMEM258P61165 79 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 C5orf47Q569G3 176 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 LELP1Q5T871 98 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 ATP5EP2Q5VTU8 51 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 C5orf38Q86SI9 138 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 SMIM20Q8N5G0 67 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 OR13C6PQ8NH95 151 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 RMI2Q96E14 147 aa3.81□□□□□ -1.8
CACNA1C-229ENST00000496818 LITAFQ99732 161 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms