RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 LY6G6CO95867 125 aa2.97□□□□□ -1.93
SNX13-210ENST00000494402 IFI6P09912 130 aa2.97□□□□□ -1.93
SNX13-210ENST00000494402 TPRP12270 2363 aaKnown RBP2.97□□□□□ -1.93
SNX13-210ENST00000494402 LMTK2Q8IWU2 1503 aa2.97□□□□□ -1.93
SNX13-210ENST00000494402 ADCY10Q96PN6 1610 aa2.97□□□□□ -1.93
SNX13-210ENST00000494402 RANBP2P49792 3224 aaKnown RBP2.97□□□□□ -1.93
SNX13-210ENST00000494402 TRAV21A0A0B4J279 112 aa2.96□□□□□ -1.94
SNX13-210ENST00000494402 KRTAP12-1P59990 96 aa2.96□□□□□ -1.94
SNX13-210ENST00000494402 RPL37P61927 97 aaKnown RBP2.96□□□□□ -1.94
SNX13-210ENST00000494402 HAMPP81172 84 aa2.96□□□□□ -1.94
SNX13-210ENST00000494402 ABCA1O95477 2261 aa2.96□□□□□ -1.94
SNX13-210ENST00000494402 CICQ96RK0 1608 aaPredicted RBP2.95□□□□□ -1.94
SNX13-210ENST00000494402 FXYD6-FXYD2A0A087WZ82 144 aa2.95□□□□□ -1.94
SNX13-210ENST00000494402 SSC5DA1L4H1 1573 aa2.95□□□□□ -1.94
SNX13-210ENST00000494402 ASCC3Q8N3C0 2202 aaKnown RBP2.95□□□□□ -1.94
SNX13-210ENST00000494402 ANKRD50Q9ULJ7 1429 aa2.94□□□□□ -1.94
SNX13-210ENST00000494402 PAPPAQ13219 1627 aa2.94□□□□□ -1.94
SNX13-210ENST00000494402 SPTBN4Q9H254 2564 aa2.94□□□□□ -1.94
SNX13-210ENST00000494402 A0A1B0GU69 56 aa2.94□□□□□ -1.94
SNX13-210ENST00000494402 KALRNO60229 2985 aa2.94□□□□□ -1.94
SNX13-210ENST00000494402 ABCA2Q9BZC7 2435 aa2.94□□□□□ -1.94
SNX13-210ENST00000494402 NOTCH2Q04721 2471 aa2.94□□□□□ -1.94
SNX13-210ENST00000494402 XRN1Q8IZH2 1706 aaKnown RBP2.93□□□□□ -1.94
SNX13-210ENST00000494402 HMGA1P17096 107 aaKnown RBP2.93□□□□□ -1.94
SNX13-210ENST00000494402 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
SNX13-210ENST00000494402 PRB1P04280 392 aa2.92□□□□□ -1.94
SNX13-210ENST00000494402 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
SNX13-210ENST00000494402 DEFB112Q30KQ8 113 aa2.92□□□□□ -1.94
SNX13-210ENST00000494402 WFDC9Q8NEX5 89 aa2.92□□□□□ -1.94
SNX13-210ENST00000494402 MKI67P46013 3256 aaKnown RBP2.92□□□□□ -1.94
SNX13-210ENST00000494402 ZFHX3Q15911 3703 aa2.92□□□□□ -1.94
SNX13-210ENST00000494402 DNAH12Q6ZR08 3092 aa2.91□□□□□ -1.94
SNX13-210ENST00000494402 RNF17Q9BXT8 1623 aaKnown RBP2.91□□□□□ -1.94
SNX13-210ENST00000494402 GAFA1Q96PS6 74 aa2.91□□□□□ -1.94
SNX13-210ENST00000494402 PAPPA2Q9BXP8 1791 aa2.91□□□□□ -1.94
SNX13-210ENST00000494402 NHSQ6T4R5 1651 aa2.91□□□□□ -1.94
SNX13-210ENST00000494402 FAM208BQ5VWN6 2430 aa2.91□□□□□ -1.94
SNX13-210ENST00000494402 DIP2AQ14689 1571 aa2.91□□□□□ -1.94
SNX13-210ENST00000494402 F5P12259 2224 aa2.91□□□□□ -1.94
SNX13-210ENST00000494402 MYO7AQ13402 2215 aa2.91□□□□□ -1.94
SNX13-210ENST00000494402 USP32Q8NFA0 1604 aa2.9□□□□□ -1.94
SNX13-210ENST00000494402 NREPQ16612 68 aa2.9□□□□□ -1.95
SNX13-210ENST00000494402 BPTFQ12830 3046 aa2.9□□□□□ -1.95
SNX13-210ENST00000494402 BIVM-ERCC5R4GMW8 1640 aa2.9□□□□□ -1.95
SNX13-210ENST00000494402 BRCA2P51587 3418 aa2.89□□□□□ -1.95
SNX13-210ENST00000494402 TIAM2Q8IVF5 1701 aa2.89□□□□□ -1.95
SNX13-210ENST00000494402 DEFB119Q8N690 84 aa2.89□□□□□ -1.95
SNX13-210ENST00000494402 CFAP54Q96N23 3096 aa2.89□□□□□ -1.95
SNX13-210ENST00000494402 WIZO95785 1651 aa2.88□□□□□ -1.95
SNX13-210ENST00000494402 SETD2Q9BYW2 2564 aaPredicted RBP2.88□□□□□ -1.95
SNX13-210ENST00000494402 ABCA6Q8N139 1617 aa2.88□□□□□ -1.95
SNX13-210ENST00000494402 ZNF831Q5JPB2 1677 aa2.88□□□□□ -1.95
SNX13-210ENST00000494402 EFCAB6Q5THR3 1501 aa2.88□□□□□ -1.95
SNX13-210ENST00000494402 SSBP3-AS1Q7Z2R9 100 aa2.87□□□□□ -1.95
SNX13-210ENST00000494402 NAV3Q8IVL0 2385 aa2.87□□□□□ -1.95
SNX13-210ENST00000494402 MYO9AB2RTY4 2548 aa2.86□□□□□ -1.95
SNX13-210ENST00000494402 FAM103A1Q9BTL3 118 aaKnown RBP2.86□□□□□ -1.95
SNX13-210ENST00000494402 ACACBO00763 2458 aa2.86□□□□□ -1.95
SNX13-210ENST00000494402 UBR3Q6ZT12 1888 aa2.86□□□□□ -1.95
SNX13-210ENST00000494402 CEP290O15078 2479 aa2.85□□□□□ -1.95
SNX13-210ENST00000494402 CENPFP49454 3210 aa2.85□□□□□ -1.95
SNX13-210ENST00000494402 LCE6AA0A183 80 aa2.85□□□□□ -1.95
SNX13-210ENST00000494402 PARP4Q9UKK3 1724 aaKnown RBP2.85□□□□□ -1.95
SNX13-210ENST00000494402 C2CD3Q4AC94 2353 aa2.85□□□□□ -1.95
SNX13-210ENST00000494402 PRXQ9BXM0 1461 aa2.84□□□□□ -1.95
SNX13-210ENST00000494402 REV3LO60673 3130 aa2.84□□□□□ -1.95
SNX13-210ENST00000494402 CACNA1CQ13936 2221 aa2.84□□□□□ -1.95
SNX13-210ENST00000494402 LINC00959A0A1B0GUT2 108 aa2.84□□□□□ -1.95
SNX13-210ENST00000494402 FXYD6P3P58550 94 aa2.84□□□□□ -1.95
SNX13-210ENST00000494402 UBE2DNLQ8IWF7 75 aa2.84□□□□□ -1.95
SNX13-210ENST00000494402 A0A0G2JMZ2 1700 aa2.84□□□□□ -1.96
SNX13-210ENST00000494402 BCORQ6W2J9 1755 aa2.84□□□□□ -1.96
SNX13-210ENST00000494402 C5orf42Q9H799 3197 aa2.84□□□□□ -1.96
SNX13-210ENST00000494402 NCOR1O75376 2440 aa2.83□□□□□ -1.96
SNX13-210ENST00000494402 EIF2AK4Q9P2K8 1649 aaKnown RBP2.83□□□□□ -1.96
SNX13-210ENST00000494402 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
SNX13-210ENST00000494402 COL14A1Q05707 1796 aaKnown RBP2.82□□□□□ -1.96
SNX13-210ENST00000494402 KIF1AQ12756 1690 aa2.82□□□□□ -1.96
SNX13-210ENST00000494402 ALS2Q96Q42 1657 aa2.82□□□□□ -1.96
SNX13-210ENST00000494402 HELZ2Q9BYK8 2649 aaKnown RBP2.81□□□□□ -1.96
SNX13-210ENST00000494402 LINC01549A6NIU2 74 aa2.81□□□□□ -1.96
SNX13-210ENST00000494402 DEFB123Q8N688 67 aa2.81□□□□□ -1.96
SNX13-210ENST00000494402 CEP250Q9BV73 2442 aa2.81□□□□□ -1.96
SNX13-210ENST00000494402 PTPRZ1P23471 2315 aaPredicted RBP2.8□□□□□ -1.96
SNX13-210ENST00000494402 COX7BP24311 80 aa2.8□□□□□ -1.96
SNX13-210ENST00000494402 MAP1BP46821 2468 aaKnown RBP2.8□□□□□ -1.96
SNX13-210ENST00000494402 CFAP46Q8IYW2 2715 aa2.79□□□□□ -1.96
SNX13-210ENST00000494402 MAST1Q9Y2H9 1570 aa2.79□□□□□ -1.96
SNX13-210ENST00000494402 TECTAO75443 2155 aa2.79□□□□□ -1.96
SNX13-210ENST00000494402 A0A0D9SFI3 127 aa2.79□□□□□ -1.96
SNX13-210ENST00000494402 K7EIL1 84 aa2.79□□□□□ -1.96
SNX13-210ENST00000494402 MROH2BQ7Z745 1585 aa2.78□□□□□ -1.96
SNX13-210ENST00000494402 DCHS1Q96JQ0 3298 aa2.78□□□□□ -1.96
SNX13-210ENST00000494402 RICTORQ6R327 1708 aa2.78□□□□□ -1.96
SNX13-210ENST00000494402 PRUNE2Q8WUY3 3088 aa2.78□□□□□ -1.96
SNX13-210ENST00000494402 CNOT1A5YKK6 2376 aaKnown RBP2.78□□□□□ -1.97
SNX13-210ENST00000494402 USP34Q70CQ2 3546 aa2.77□□□□□ -1.97
SNX13-210ENST00000494402 SPTAN1Q13813 2472 aaKnown RBP2.77□□□□□ -1.97
SNX13-210ENST00000494402 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
SNX13-210ENST00000494402 CELSR3Q9NYQ7 3312 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms