RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
RIF1-211ENST00000494333 CST9LQ9H4G1 147 aa4.91□□□□□ -1.62
RIF1-211ENST00000494333 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
RIF1-211ENST00000494333 TINCRA0A1B0GVN0 87 aa4.9□□□□□ -1.63
RIF1-211ENST00000494333 F8VRH5 84 aa4.9□□□□□ -1.63
RIF1-211ENST00000494333 PMVKQ15126 192 aa4.9□□□□□ -1.63
RIF1-211ENST00000494333 DIRC1Q969H9 104 aa4.9□□□□□ -1.63
RIF1-211ENST00000494333 XAGE1AQ9HD64 81 aa4.9□□□□□ -1.63
RIF1-211ENST00000494333 TRAPPC1Q9Y5R8 145 aa4.9□□□□□ -1.63
RIF1-211ENST00000494333 A0A087X002 238 aa4.89□□□□□ -1.63
RIF1-211ENST00000494333 APOC3P02656 99 aa4.89□□□□□ -1.63
RIF1-211ENST00000494333 SPINK8P0C7L1 97 aa4.89□□□□□ -1.63
RIF1-211ENST00000494333 LINC00614P0C842 121 aa4.89□□□□□ -1.63
RIF1-211ENST00000494333 CXCL5P42830 114 aa4.89□□□□□ -1.63
RIF1-211ENST00000494333 NDUFA6P56556 154 aa4.89□□□□□ -1.63
RIF1-211ENST00000494333 PDZD11Q5EBL8 140 aa4.89□□□□□ -1.63
RIF1-211ENST00000494333 COX7B2Q8TF08 81 aa4.89□□□□□ -1.63
RIF1-211ENST00000494333 C22orf24Q9Y442 160 aa4.89□□□□□ -1.63
RIF1-211ENST00000494333 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
RIF1-211ENST00000494333 RAB5BP61020 215 aa4.88□□□□□ -1.63
RIF1-211ENST00000494333 PKHD1L1Q86WI1 4243 aa4.87□□□□□ -1.63
RIF1-211ENST00000494333 H0Y9J4 135 aa4.87□□□□□ -1.63
RIF1-211ENST00000494333 H3BRM9 83 aa4.87□□□□□ -1.63
RIF1-211ENST00000494333 SNAPINO95295 136 aa4.87□□□□□ -1.63
RIF1-211ENST00000494333 LBHQ53QV2 105 aaPredicted RBP4.87□□□□□ -1.63
RIF1-211ENST00000494333 C18orf32Q8TCD1 76 aa4.87□□□□□ -1.63
RIF1-211ENST00000494333 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
RIF1-211ENST00000494333 A0A096LNJ9 63 aa4.86□□□□□ -1.63
RIF1-211ENST00000494333 PMCHL1Q16048 86 aa4.86□□□□□ -1.63
RIF1-211ENST00000494333 NDUFA5Q16718 116 aa4.86□□□□□ -1.63
RIF1-211ENST00000494333 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
RIF1-211ENST00000494333 MRPL55Q7Z7F7 128 aaKnown RBP4.86□□□□□ -1.63
RIF1-211ENST00000494333 SVBPQ8N300 66 aa4.86□□□□□ -1.63
RIF1-211ENST00000494333 ZNF861PO60384 105 aa4.85□□□□□ -1.63
RIF1-211ENST00000494333 ATP5LO75964 103 aa4.85□□□□□ -1.63
RIF1-211ENST00000494333 HBDP02042 147 aa4.85□□□□□ -1.63
RIF1-211ENST00000494333 IGLC3P0DOY3 106 aa4.85□□□□□ -1.63
RIF1-211ENST00000494333 RPL37AP8A6NKH3 93 aa4.84□□□□□ -1.63
RIF1-211ENST00000494333 NUPR1O60356 82 aa4.84□□□□□ -1.63
RIF1-211ENST00000494333 KRTAP1-4P0C5Y4 121 aa4.84□□□□□ -1.63
RIF1-211ENST00000494333 BAGE3Q86Y29 109 aa4.84□□□□□ -1.63
RIF1-211ENST00000494333 LINC00167Q96N53 147 aa4.84□□□□□ -1.63
RIF1-211ENST00000494333 TP73-AS1Q9UF72 201 aa4.84□□□□□ -1.63
RIF1-211ENST00000494333 IGLV1-50A0A075B6I6 118 aa4.83□□□□□ -1.64
RIF1-211ENST00000494333 ZNF22P17026 224 aaPredicted RBP4.83□□□□□ -1.64
RIF1-211ENST00000494333 PFN2P35080 140 aa4.83□□□□□ -1.64
RIF1-211ENST00000494333 TMEM170BQ5T4T1 132 aa4.83□□□□□ -1.64
RIF1-211ENST00000494333 C11orf86A6NJI1 115 aa4.82□□□□□ -1.64
RIF1-211ENST00000494333 NKAPP1Q8N9T2 125 aa4.82□□□□□ -1.64
RIF1-211ENST00000494333 ZNF625Q96I27 306 aaPredicted RBP4.82□□□□□ -1.64
RIF1-211ENST00000494333 BCE1O60756 84 aa4.81□□□□□ -1.64
RIF1-211ENST00000494333 RPL28P46779 137 aaKnown RBP4.81□□□□□ -1.64
RIF1-211ENST00000494333 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
RIF1-211ENST00000494333 YPEL4Q96NS1 127 aa4.81□□□□□ -1.64
RIF1-211ENST00000494333 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
RIF1-211ENST00000494333 CHTOPQ9Y3Y2 248 aaKnown RBP4.81□□□□□ -1.64
RIF1-211ENST00000494333 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
RIF1-211ENST00000494333 TNXBP22105 4242 aa4.8□□□□□ -1.64
RIF1-211ENST00000494333 SCO1O75880 301 aa4.8□□□□□ -1.64
RIF1-211ENST00000494333 RPL13AP40429 203 aaKnown RBP4.8□□□□□ -1.64
RIF1-211ENST00000494333 COX17Q14061 63 aa4.8□□□□□ -1.64
RIF1-211ENST00000494333 SND1-IT1Q9HBX3 110 aa4.8□□□□□ -1.64
RIF1-211ENST00000494333 IGKV2-28A0A075B6P5 120 aa4.79□□□□□ -1.64
RIF1-211ENST00000494333 IGKV2D-28P01615 120 aa4.79□□□□□ -1.64
RIF1-211ENST00000494333 CBLN2Q8IUK8 224 aa4.79□□□□□ -1.64
RIF1-211ENST00000494333 FAM19A2Q8N3H0 131 aa4.79□□□□□ -1.64
RIF1-211ENST00000494333 IFI27L1Q96BM0 104 aa4.79□□□□□ -1.64
RIF1-211ENST00000494333 TRAV12-1A0A0B4J245 112 aa4.78□□□□□ -1.64
RIF1-211ENST00000494333 HSBP1O75506 76 aa4.78□□□□□ -1.64
RIF1-211ENST00000494333 UBE2AP49459 152 aa4.78□□□□□ -1.64
RIF1-211ENST00000494333 LINC00158P58513 81 aa4.78□□□□□ -1.64
RIF1-211ENST00000494333 SFTA2Q6UW10 78 aa4.78□□□□□ -1.64
RIF1-211ENST00000494333 A0A0U1RRA0 63 aa4.77□□□□□ -1.65
RIF1-211ENST00000494333 TMEM223A0PJW6 202 aa4.77□□□□□ -1.65
RIF1-211ENST00000494333 TRGC2P03986 189 aa4.77□□□□□ -1.65
RIF1-211ENST00000494333 ANAPC11Q9NYG5 84 aa4.77□□□□□ -1.65
RIF1-211ENST00000494333 ATP6V1G1O75348 118 aa4.76□□□□□ -1.65
RIF1-211ENST00000494333 CRYGAP11844 174 aa4.76□□□□□ -1.65
RIF1-211ENST00000494333 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
RIF1-211ENST00000494333 FAM19A1Q7Z5A9 133 aa4.76□□□□□ -1.65
RIF1-211ENST00000494333 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
RIF1-211ENST00000494333 SLC7A5P1Q8MH63 180 aa4.76□□□□□ -1.65
RIF1-211ENST00000494333 Q8NDZ9 215 aa4.76□□□□□ -1.65
RIF1-211ENST00000494333 TMEM238C9JI98 176 aa4.75□□□□□ -1.65
RIF1-211ENST00000494333 H0Y8G0 127 aa4.75□□□□□ -1.65
RIF1-211ENST00000494333 TSPAN13O95857 204 aa4.75□□□□□ -1.65
RIF1-211ENST00000494333 PRLHP81277 87 aa4.75□□□□□ -1.65
RIF1-211ENST00000494333 PRR4Q16378 134 aa4.75□□□□□ -1.65
RIF1-211ENST00000494333 TYMSOSQ8TAI1 123 aa4.75□□□□□ -1.65
RIF1-211ENST00000494333 TMEM126AQ9H061 195 aa4.75□□□□□ -1.65
RIF1-211ENST00000494333 M0R378 163 aa4.74□□□□□ -1.65
RIF1-211ENST00000494333 LEPROTL1O95214 131 aa4.74□□□□□ -1.65
RIF1-211ENST00000494333 SMIM13P0DJ93 91 aa4.74□□□□□ -1.65
RIF1-211ENST00000494333 MEIG1Q5JSS6 88 aa4.74□□□□□ -1.65
RIF1-211ENST00000494333 SERF1AO75920 110 aa4.73□□□□□ -1.65
RIF1-211ENST00000494333 FABP4P15090 132 aa4.73□□□□□ -1.65
RIF1-211ENST00000494333 HERV-K104P63124 156 aa4.73□□□□□ -1.65
RIF1-211ENST00000494333 BOD1L2Q8IYS8 172 aa4.73□□□□□ -1.65
RIF1-211ENST00000494333 MIR7-3HGQ8N6C7 128 aa4.73□□□□□ -1.65
RIF1-211ENST00000494333 NDUFA12Q9UI09 145 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms