RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 IGLV5-45A0A087WSX0 123 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 TRBV6-8A0A0A6YYG3 113 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 CLPSL2Q6UWE3 100 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 X6R8D5 127 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 USP17L23D6RBM5 183 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 DNAL4O96015 105 aa4.88□□□□□ -1.63
HERC4-211ENST00000492996 C5orf38Q86SI9 138 aa4.87□□□□□ -1.63
HERC4-211ENST00000492996 PLECQ15149 4684 aaKnown RBP4.87□□□□□ -1.63
HERC4-211ENST00000492996 IGLV5-39A0A0G2JS06 123 aa4.87□□□□□ -1.63
HERC4-211ENST00000492996 NDUFA1O15239 70 aa4.87□□□□□ -1.63
HERC4-211ENST00000492996 HTN3P15516 51 aa4.87□□□□□ -1.63
HERC4-211ENST00000492996 LST1O00453 97 aa4.87□□□□□ -1.63
HERC4-211ENST00000492996 RBM3P98179 157 aaKnown RBP4.87□□□□□ -1.63
HERC4-211ENST00000492996 S100A7L2Q5SY68 101 aa4.87□□□□□ -1.63
HERC4-211ENST00000492996 NOTCH1P46531 2555 aa4.86□□□□□ -1.63
HERC4-211ENST00000492996 BAALC-AS2P0C853 105 aa4.86□□□□□ -1.63
HERC4-211ENST00000492996 DEFB121Q5J5C9 76 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 PAX4O43316 350 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 GHRHP01286 108 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 SOSTDC1Q6X4U4 206 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 LINC00308Q8TCZ7 52 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 SMIM26A0A096LP01 95 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 IGHV4-28A0A0C4DH34 117 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 XCL1P47992 114 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 CASC10Q5T4H9 136 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 PRO0255Q9UI72 69 aa4.85□□□□□ -1.63
HERC4-211ENST00000492996 INAFM2P0DMQ5 153 aa4.84□□□□□ -1.63
HERC4-211ENST00000492996 Q8N3U1 123 aa4.84□□□□□ -1.63
HERC4-211ENST00000492996 TRAV23DV6A0A075B6W5 121 aa4.84□□□□□ -1.63
HERC4-211ENST00000492996 DAD1P61803 113 aa4.84□□□□□ -1.63
HERC4-211ENST00000492996 CELA1Q9UNI1 258 aa4.84□□□□□ -1.63
HERC4-211ENST00000492996 SS18Q15532 418 aa4.84□□□□□ -1.64
HERC4-211ENST00000492996 MUC7Q8TAX7 377 aa4.84□□□□□ -1.64
HERC4-211ENST00000492996 COX7B2Q8TF08 81 aa4.84□□□□□ -1.64
HERC4-211ENST00000492996 IGLV10-54A0A075B6I4 117 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 A0A1B0GVY2 172 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 TIMM17BO60830 172 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 UPK3BQ9BT76 320 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 PKD1L1Q8TDX9 2849 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 IGHV3OR16-9A0A0B4J2B5 98 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 LINC00959A0A1B0GUT2 108 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 APOC4P55056 127 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 LINC00158P58513 81 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 PMAIP1Q13794 54 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 FAM19A3Q7Z5A8 133 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 LINC00612Q8N6U2 182 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 COL6A5A8TX70 2615 aa4.83□□□□□ -1.64
HERC4-211ENST00000492996 IGHV4-30-4P0DP06 118 aa4.82□□□□□ -1.64
HERC4-211ENST00000492996 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
HERC4-211ENST00000492996 MIR7-3HGQ8N6C7 128 aa4.82□□□□□ -1.64
HERC4-211ENST00000492996 LINC00474Q9P2X8 69 aa4.82□□□□□ -1.64
HERC4-211ENST00000492996 NDUFC2-KCTD14E9PQ53 114 aa4.82□□□□□ -1.64
HERC4-211ENST00000492996 HERC2O95714 4834 aa4.82□□□□□ -1.64
HERC4-211ENST00000492996 LINC01600Q96MT4 127 aa4.82□□□□□ -1.64
HERC4-211ENST00000492996 LYRM9A8MSI8 78 aa4.81□□□□□ -1.64
HERC4-211ENST00000492996 LINC00269Q8N2A0 174 aa4.81□□□□□ -1.64
HERC4-211ENST00000492996 COPS9Q8WXC6 57 aa4.81□□□□□ -1.64
HERC4-211ENST00000492996 ANGP03950 147 aaKnown RBP4.81□□□□□ -1.64
HERC4-211ENST00000492996 Q9HAA7 133 aa4.81□□□□□ -1.64
HERC4-211ENST00000492996 C14orf132Q9NPU4 83 aa4.81□□□□□ -1.64
HERC4-211ENST00000492996 Q8NAQ8 132 aa4.81□□□□□ -1.64
HERC4-211ENST00000492996 TENM3Q9P273 2699 aa4.8□□□□□ -1.64
HERC4-211ENST00000492996 A0A087WZ39 114 aa4.8□□□□□ -1.64
HERC4-211ENST00000492996 NUPR2A6NF83 97 aa4.8□□□□□ -1.64
HERC4-211ENST00000492996 H3BNG1 76 aa4.8□□□□□ -1.64
HERC4-211ENST00000492996 SNURFQ9Y675 71 aa4.8□□□□□ -1.64
HERC4-211ENST00000492996 SPART-AS1P0CW21 52 aa4.79□□□□□ -1.64
HERC4-211ENST00000492996 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
HERC4-211ENST00000492996 SND1-IT1Q9HBX3 110 aa4.79□□□□□ -1.64
HERC4-211ENST00000492996 RYR3Q15413 4870 aa4.79□□□□□ -1.64
HERC4-211ENST00000492996 MIFP14174 115 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 CCL18P55774 89 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 Q6JHZ5 121 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 LINC00846Q9NV44 126 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 PKD1P98161 4303 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 TRBV7-6A0A0J9YX20 115 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 A0A1B0GUV1 79 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 COX7A2LO14548 114 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 REG3AQ06141 175 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 LINC00337Q8N6G1 96 aa4.78□□□□□ -1.64
HERC4-211ENST00000492996 CRPP02741 224 aa4.78□□□□□ -1.65
HERC4-211ENST00000492996 CHCHD10Q8WYQ3 142 aaPredicted RBP4.78□□□□□ -1.65
HERC4-211ENST00000492996 F8WEM9 126 aa4.77□□□□□ -1.65
HERC4-211ENST00000492996 STARD9Q9P2P6 4700 aa4.77□□□□□ -1.65
HERC4-211ENST00000492996 IGKV2-28A0A075B6P5 120 aa4.77□□□□□ -1.65
HERC4-211ENST00000492996 IGKV2D-28P01615 120 aa4.77□□□□□ -1.65
HERC4-211ENST00000492996 C9orf116Q5BN46 136 aaPredicted RBP4.77□□□□□ -1.65
HERC4-211ENST00000492996 MRPL55Q7Z7F7 128 aaKnown RBP4.77□□□□□ -1.65
HERC4-211ENST00000492996 KLK12Q9UKR0 248 aa4.77□□□□□ -1.65
HERC4-211ENST00000492996 ENHOQ6UWT2 76 aa4.76□□□□□ -1.65
HERC4-211ENST00000492996 IBA57-AS1B1ANH7 110 aa4.76□□□□□ -1.65
HERC4-211ENST00000492996 PRR3P79522 188 aaKnown RBP4.76□□□□□ -1.65
HERC4-211ENST00000492996 RMI2Q96E14 147 aa4.76□□□□□ -1.65
HERC4-211ENST00000492996 NBEAL1Q6ZS30 2694 aa4.76□□□□□ -1.65
HERC4-211ENST00000492996 CCKP06307 115 aa4.76□□□□□ -1.65
HERC4-211ENST00000492996 RPL28P46779 137 aaKnown RBP4.76□□□□□ -1.65
HERC4-211ENST00000492996 FAM218AQ96MZ4 157 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms