RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 TRACP01848 142 aa2.37□□□□□ -2.03
SND1-216ENST00000492840 LSM3P62310 102 aaKnown RBP2.37□□□□□ -2.03
SND1-216ENST00000492840 CNBPP62633 177 aaKnown RBP2.37□□□□□ -2.03
SND1-216ENST00000492840 CIRBPQ14011 172 aaKnown RBP2.37□□□□□ -2.03
SND1-216ENST00000492840 GDF5OSQ5U4N7 250 aa2.37□□□□□ -2.03
SND1-216ENST00000492840 TMEM91Q6ZNR0 172 aa2.37□□□□□ -2.03
SND1-216ENST00000492840 TP53RKQ96S44 253 aa2.37□□□□□ -2.03
SND1-216ENST00000492840 LPAR5Q9H1C0 372 aa2.37□□□□□ -2.03
SND1-216ENST00000492840 TIMM8BQ9Y5J9 83 aaPredicted RBP2.37□□□□□ -2.03
SND1-216ENST00000492840 F8W036 122 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 CD2P06729 351 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 NCS1P62166 190 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 RPS25P62851 125 aaKnown RBP2.36□□□□□ -2.03
SND1-216ENST00000492840 PPP3R1P63098 170 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 LINC00269Q8N2A0 174 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 Q8TAT8 98 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 NOP10Q9NPE3 64 aaKnown RBP2.36□□□□□ -2.03
SND1-216ENST00000492840 BET1LQ9NYM9 111 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 COMMD3Q9UBI1 195 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 USH2AO75445 5202 aa2.36□□□□□ -2.03
SND1-216ENST00000492840 SYNE2Q8WXH0 6885 aaKnown RBP2.35□□□□□ -2.03
SND1-216ENST00000492840 K7ERU9 68 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 GPX1P07203 203 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 ETV6P41212 452 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 PRCDQ00LT1 54 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 SPCS2Q15005 226 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 KRTAP26-1Q6PEX3 210 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 GLIPR1L1Q6UWM5 242 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 LYPD5Q6UWN5 251 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 C2orf82Q6UX34 121 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 TEN1Q86WV5 123 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 TMEM263Q8WUH6 116 aaKnown RBP2.35□□□□□ -2.03
SND1-216ENST00000492840 LSM10Q969L4 123 aaKnown RBP2.35□□□□□ -2.03
SND1-216ENST00000492840 TMEM203Q969S6 136 aa2.35□□□□□ -2.03
SND1-216ENST00000492840 C9orf170A2RU37 121 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 A8MTW9 85 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 TMEM14DPA8MWL7 114 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 TRAPPC2P0DI81 140 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 TRAPPC2BP0DI82 140 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 DEFB1P60022 68 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 WT1-ASQ06250 92 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 LINC01556Q5JQF7 62 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 C6orf201Q7Z4U5 140 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 FAM19A2Q8N3H0 131 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 OR5AK2Q8NH90 309 aa2.34□□□□□ -2.03
SND1-216ENST00000492840 TRBV6-5A0A0K0K1A5 114 aa2.33□□□□□ -2.04
SND1-216ENST00000492840 A0A1B0GV90 55 aa2.33□□□□□ -2.04
SND1-216ENST00000492840 I3L2K1 104 aa2.33□□□□□ -2.04
SND1-216ENST00000492840 NCR2O95944 276 aa2.33□□□□□ -2.04
SND1-216ENST00000492840 RNASE3P12724 160 aaKnown RBP2.33□□□□□ -2.04
SND1-216ENST00000492840 SPINK13Q1W4C9 94 aa2.33□□□□□ -2.04
SND1-216ENST00000492840 KRTAP13-4Q3LI77 160 aa2.33□□□□□ -2.04
SND1-216ENST00000492840 SPINK6Q6UWN8 80 aa2.33□□□□□ -2.04
SND1-216ENST00000492840 LINC00052Q96N35 136 aa2.33□□□□□ -2.04
SND1-216ENST00000492840 TRBV6-7A0A0A0MS04 114 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 TRBV6-8A0A0A6YYG3 113 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 A0A0G2JND7 137 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 FAM236AA0A1B0GUQ0 79 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 FAM236BA0A1B0GV22 79 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 M0R129 80 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 CD3DP04234 171 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 HTN1P15515 57 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 RRAS2P62070 204 aaPredicted RBP2.32□□□□□ -2.04
SND1-216ENST00000492840 ATP6V0E2Q8NHE4 81 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 RPRMQ9NS64 109 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 PRO0255Q9UI72 69 aa2.32□□□□□ -2.04
SND1-216ENST00000492840 NEBP20929 6669 aa2.31□□□□□ -2.04
SND1-216ENST00000492840 TRGV2A0A075B6R0 118 aa2.31□□□□□ -2.04
SND1-216ENST00000492840 J3QLW9 94 aa2.31□□□□□ -2.04
SND1-216ENST00000492840 CKS2P33552 79 aa2.31□□□□□ -2.04
SND1-216ENST00000492840 MIR22HGQ0VDD5 57 aa2.31□□□□□ -2.04
SND1-216ENST00000492840 TEX261Q6UWH6 196 aa2.31□□□□□ -2.04
SND1-216ENST00000492840 SAR1AQ9NR31 198 aa2.31□□□□□ -2.04
SND1-216ENST00000492840 NDUFA4L2Q9NRX3 87 aa2.31□□□□□ -2.04
SND1-216ENST00000492840 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
SND1-216ENST00000492840 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
SND1-216ENST00000492840 TRAV12-2A0A075B6T6 113 aa2.3□□□□□ -2.04
SND1-216ENST00000492840 LOC107984156A0A0G2JMH3 177 aa2.3□□□□□ -2.04
SND1-216ENST00000492840 C3orf85A0A1B0GTC6 90 aa2.3□□□□□ -2.04
SND1-216ENST00000492840 PITX3O75364 302 aa2.3□□□□□ -2.04
SND1-216ENST00000492840 HYPMO75409 117 aa2.3□□□□□ -2.04
SND1-216ENST00000492840 INSL4Q14641 139 aa2.3□□□□□ -2.04
SND1-216ENST00000492840 ASB16-AS1Q495Z4 193 aa2.3□□□□□ -2.04
SND1-216ENST00000492840 ARL17AQ8IVW1 177 aa2.3□□□□□ -2.04
SND1-216ENST00000492840 ZCCHC13Q8WW36 166 aaKnown RBP2.3□□□□□ -2.04
SND1-216ENST00000492840 LINC00587B1AMM8 73 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 IGHV3-30P01768 117 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 IGHV3-33P01772 117 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 IGHV3-30-5P0DP03 117 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 CATR1Q13166 79 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 CLLU1Q5K131 121 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 C12orf73Q69YU5 71 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 ACBD7Q8N6N7 88 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 ZNF431Q8TF32 576 aaPredicted RBP2.29□□□□□ -2.04
SND1-216ENST00000492840 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
SND1-216ENST00000492840 TAS2R8Q9NYW2 309 aa2.29□□□□□ -2.04
SND1-216ENST00000492840 LSM2Q9Y333 95 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms