RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 LINC00311Q8N616 119 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 ADAT3Q96EY9 351 aaPredicted RBP1.64□□□□□ -2.15
SNX13-209ENST00000492626 PRNDQ9UKY0 176 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 TRBV19A0A075B6N1 114 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 TMSB15BA0A087X1C1 80 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 A0A1B0GX51 115 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 G6PCP35575 357 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 KRTAP10-7P60409 375 aaPredicted RBP1.64□□□□□ -2.15
SNX13-209ENST00000492626 FXYD3Q14802 87 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 MRPL54Q6P161 138 aaKnown RBP1.64□□□□□ -2.15
SNX13-209ENST00000492626 UBE2DNLQ8IWF7 75 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 C10orf126Q8N4M7 172 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 RNF213Q63HN8 5207 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 MUC2Q02817 5179 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 RIIAD1A6NNX1 92 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 M0R2Z0 102 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 TFF1P04155 84 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 LINC01545Q5VT33 79 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 SFTA2Q6UW10 78 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 BRD3OSQ6XYD6 125 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 OR2H1Q9GZK4 316 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 NHP2Q9NX24 153 aaKnown RBP1.63□□□□□ -2.15
SNX13-209ENST00000492626 NEBP20929 6669 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 TRGV4A0A0C4DH28 118 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 FABP2P12104 132 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 CNBPP62633 177 aaKnown RBP1.63□□□□□ -2.15
SNX13-209ENST00000492626 SKA2Q8WVK7 121 aaPredicted RBP1.63□□□□□ -2.15
SNX13-209ENST00000492626 MRPL32Q9BYC8 188 aaKnown RBP1.63□□□□□ -2.15
SNX13-209ENST00000492626 J3KT08 172 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 TMEM126AQ9H061 195 aa1.63□□□□□ -2.15
SNX13-209ENST00000492626 NDUFB3O43676 98 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 RPS28P62857 69 aaKnown RBP1.62□□□□□ -2.15
SNX13-209ENST00000492626 SS18Q15532 418 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 C1orf140Q5VVS0 124 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 ARHGAP5-AS1Q96IT6 56 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 TRBV10-2A0A0K0K1G8 114 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 OR2H2O95918 312 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 SSR2P43308 183 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 FOXA3P55318 350 aaPredicted RBP1.62□□□□□ -2.15
SNX13-209ENST00000492626 HCP5Q6MZN7 132 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 LCA10Q71F78 164 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 BANF2Q9H503 90 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 BORCS7-ASMTA0A0B4J1R7 106 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 TMEM14DPA8MWL7 114 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 TMEM262E9PQX1 116 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 ATP6V0E2Q8NHE4 81 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 PLCE1Q9P212 2302 aa1.62□□□□□ -2.15
SNX13-209ENST00000492626 TEX49A0A1B0GTD5 131 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 SMIM27A0A1W2PRY6 76 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 hADV29S1A0JD25 119 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 ASIPP42127 132 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 LINC00474Q9P2X8 69 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 SDHAF1A6NFY7 115 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 LYNX1G3V0Z9 82 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 PPYP01298 95 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 LYNX1P0DP58 116 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 Q9BRP9 147 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 SOX21Q9Y651 276 aaPredicted RBP1.61□□□□□ -2.15
SNX13-209ENST00000492626 TRBV7-3A0A075B6L6 115 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 IGKV1-9A0A0C4DH69 117 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 IGKV1-5P01602 117 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 SMIM13P0DJ93 91 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 KRTAP10-8P60410 259 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 UBE2D3P61077 147 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 UBE2D2P62837 147 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 RRN3P1Q2M238 152 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 LYPD5Q6UWN5 251 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 Q6ZTI0 123 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 TEN1Q86WV5 123 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 LINC00526Q96FQ7 95 aa1.61□□□□□ -2.15
SNX13-209ENST00000492626 TRBV25-1A0A075B6N4 114 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 HMGN2P05204 90 aaKnown RBP1.6□□□□□ -2.15
SNX13-209ENST00000492626 CIRBPQ14011 172 aaKnown RBP1.6□□□□□ -2.15
SNX13-209ENST00000492626 KISS1Q15726 138 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 OR5AS1Q8N127 324 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 NAA60Q9H7X0 242 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 SPANXA1Q9NS26 97 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 MT-ND6P03923 174 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 P0C880 135 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 MGST1P10620 155 aaKnown RBP1.6□□□□□ -2.15
SNX13-209ENST00000492626 KLK9Q2XQG4 91 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 SPANXN5Q5MJ07 72 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 C10orf128Q5T292 105 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 DYNAPQ8N1N2 210 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 ZNF714Q96N38 554 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 AGPAT4-IT1Q9H0P7 198 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 DPH3P1Q9H4G8 78 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 KLK9Q9UKQ9 250 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 IGKV1D-42A0A075B6H8 117 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 IGKV1D-43A0A0B4J1Z2 117 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 CRYGAP11844 174 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 C6orf201Q7Z4U5 140 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 NUP35Q8NFH5 326 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 PPDPFLQ8WWR9 84 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 EPDR1Q9UM22 224 aa1.6□□□□□ -2.15
SNX13-209ENST00000492626 TRBV7-7A0A0K0K1E9 115 aa1.59□□□□□ -2.15
SNX13-209ENST00000492626 H3BRN7 92 aa1.59□□□□□ -2.15
SNX13-209ENST00000492626 HLA-DRB4P13762 266 aa1.59□□□□□ -2.15
SNX13-209ENST00000492626 ZNF818PQ6ZRF7 136 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms