RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NDUFS5O43920 106 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 UBE2BP63146 152 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 IGFL3Q6UXB1 125 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 STHQ8IWL8 128 aa3.29□□□□□ -1.88
SNRNP40-206ENST00000489853 TRAV22A0A0B4J277 110 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 IGHV3-11P01762 117 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 HTN1P15515 57 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 KRTAP10-2P60368 255 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 SPATA3Q8NHX4 192 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 MAP6D1Q9H9H5 199 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 LINC00588Q9Y4M8 146 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 DOPEY2Q9Y3R5 2298 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 FBN2P35556 2912 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 CELSR2Q9HCU4 2923 aa3.28□□□□□ -1.88
SNRNP40-206ENST00000489853 IGHV3OR16-9A0A0B4J2B5 98 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 J3QKU1 62 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 PSPHP1O15172 72 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 LY6HO94772 140 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 IGHV4-31P0DP07 118 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 LMO4P61968 165 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 SYCNQ0VAF6 134 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 CD164L2Q6UWJ8 174 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 C1orf64Q8NEQ6 169 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 MUC7Q8TAX7 377 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 HIGD2AQ9BW72 106 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 SPTAN1Q13813 2472 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 LCE6AA0A183 80 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 A8MTW9 85 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 M0R378 163 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 UBE2L6O14933 153 aa3.27□□□□□ -1.89
SNRNP40-206ENST00000489853 CSMD2Q7Z408 3487 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 ABCA12Q86UK0 2595 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 LRCOL1A6NCL2 159 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 IGKV4-1P06312 121 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 DEFB109BQ30KR1 87 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 ODF3L2Q3SX64 289 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 CRYBG3Q68DQ2 2970 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 ATP11AUNQ6ZP68 121 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 SCXQ7RTU7 201 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 PHF5AQ7RTV0 110 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 CYP4F30PQ9H0H9 118 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 NF1P21359 2839 aa3.26□□□□□ -1.89
SNRNP40-206ENST00000489853 NBASA2RRP1 2371 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 ZFHX3Q15911 3703 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 TRBV6-8A0A0A6YYG3 113 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 UBE2AP49459 152 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 PRR3P79522 188 aaKnown RBP3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 COX17Q14061 63 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 C6orf99Q4VX62 202 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 OTOGQ6ZRI0 2925 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 SPTBN1Q01082 2364 aaKnown RBP3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 PSCAO43653 123 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 DEFB114Q30KQ6 69 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 LINC00269Q8N2A0 174 aa3.25□□□□□ -1.89
SNRNP40-206ENST00000489853 SETD2Q9BYW2 2564 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 SORL1Q92673 2214 aa3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 A8MUN3 132 aa3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 PRM2P04554 102 aa3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 Q5VV11 94 aa3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 Q8IZM0 81 aa3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 ZCCHC13Q8WW36 166 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 ESM1Q9NQ30 184 aa3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 ITPR3Q14573 2671 aa3.24□□□□□ -1.89
SNRNP40-206ENST00000489853 DOPEY1Q5JWR5 2465 aa3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 PDZD2O15018 2839 aa3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 IGHV4-30-2A0A087WSY4 118 aa3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 COX7BP24311 80 aa3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 Q6ZQY7 126 aa3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 UBE2E2Q96LR5 201 aa3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 LIMD2Q9BT23 127 aa3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 PRRC2CQ9Y520 2896 aaKnown RBP3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 C16orf90A8MZG2 172 aa3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 APOC4P55056 127 aa3.23□□□□□ -1.89
SNRNP40-206ENST00000489853 POLQO75417 2590 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 CELSR1Q9NYQ6 3014 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 IGKV3OR2-268A0A0C4DH90 116 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 A6NN06 94 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 CHKB-CPT1BH3BT56 60 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 CCL24O00175 119 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 DEFB131AP59861 70 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 LINC01006Q8NI28 216 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 CREBBPQ92793 2442 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 ADGRG4Q8IZF6 3080 aa3.22□□□□□ -1.89
SNRNP40-206ENST00000489853 TRGV1A0A0A0MS02 117 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 IGHV4-28A0A0C4DH34 117 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 LINC00959A0A1B0GUT2 108 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 A6NDX4 124 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 ZNF73O43830 326 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 NDUFB1O75438 58 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 INSP01308 110 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 ELOF1P60002 83 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 C11orf71Q6IPW1 123 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 Q8N9L7 120 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 C11orf45Q8TAV5 145 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 APCP25054 2843 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 IGLV4-60A0A075B6I1 120 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 TRGV2A0A075B6R0 118 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 ETDCA0A1B0GVM5 59 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 A8MU10 97 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms