RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 FRAS1Q86XX4 4008 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.07□□□□□ -1.76
LRRC47-203ENST00000479239 A0A1B0GWB2 263 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 PFN2P35080 140 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 HIGD2BQ4VC39 106 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 UNQ6190/PRO20217Q6UXQ8 127 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 C6orf223Q8N319 242 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 MIR7-3HGQ8N6C7 128 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 LINC00308Q8TCZ7 52 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
LRRC47-203ENST00000479239 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
LRRC47-203ENST00000479239 CFC1BP0CG36 223 aa4.06□□□□□ -1.76
LRRC47-203ENST00000479239 CFC1P0CG37 223 aa4.06□□□□□ -1.76
LRRC47-203ENST00000479239 C10orf25Q5T742 122 aa4.06□□□□□ -1.76
LRRC47-203ENST00000479239 KRTAP19-1Q8IUB9 90 aa4.06□□□□□ -1.76
LRRC47-203ENST00000479239 C15orf56Q8N910 161 aa4.06□□□□□ -1.76
LRRC47-203ENST00000479239 NTN5Q8WTR8 489 aaPredicted RBP4.06□□□□□ -1.76
LRRC47-203ENST00000479239 CAMK2N2Q96S95 79 aa4.06□□□□□ -1.76
LRRC47-203ENST00000479239 GVQW2A0A096LPI5 108 aaPredicted RBP4.05□□□□□ -1.76
LRRC47-203ENST00000479239 A0A0B4J2C4 111 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 H3BUT2 72 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 COX17Q14061 63 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 VAMP3Q15836 100 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 C9orf116Q5BN46 136 aaPredicted RBP4.05□□□□□ -1.76
LRRC47-203ENST00000479239 TTC32Q5I0X7 151 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 SOSTDC1Q6X4U4 206 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 C2orf48Q96LS8 159 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 NAA38Q9BRA0 125 aaKnown RBP4.05□□□□□ -1.76
LRRC47-203ENST00000479239 KRTAP4-5Q9BYR2 181 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 KRTAP1-5Q9BYS1 174 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 PPDPFQ9H3Y8 114 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 PRO1854Q9UHT4 67 aa4.05□□□□□ -1.76
LRRC47-203ENST00000479239 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
LRRC47-203ENST00000479239 NBDYA0A0U1RRE5 68 aa4.04□□□□□ -1.76
LRRC47-203ENST00000479239 USP17L23D6RBM5 183 aa4.04□□□□□ -1.76
LRRC47-203ENST00000479239 F8WDY8 70 aa4.04□□□□□ -1.76
LRRC47-203ENST00000479239 H7C2G1 150 aa4.04□□□□□ -1.76
LRRC47-203ENST00000479239 PSCAO43653 123 aa4.04□□□□□ -1.76
LRRC47-203ENST00000479239 FABP2P12104 132 aa4.04□□□□□ -1.76
LRRC47-203ENST00000479239 C6orf48Q9UBA6 75 aa4.04□□□□□ -1.76
LRRC47-203ENST00000479239 TRBV30A0A0K0K1B3 111 aa4.03□□□□□ -1.76
LRRC47-203ENST00000479239 A0A1W2PPM0 123 aa4.03□□□□□ -1.76
LRRC47-203ENST00000479239 TSPAN13O95857 204 aa4.03□□□□□ -1.76
LRRC47-203ENST00000479239 SYCNQ0VAF6 134 aa4.03□□□□□ -1.76
LRRC47-203ENST00000479239 Q1RN00 199 aa4.03□□□□□ -1.76
LRRC47-203ENST00000479239 Q6ZRU5 148 aa4.03□□□□□ -1.76
LRRC47-203ENST00000479239 SND1-IT1Q9HBX3 110 aa4.03□□□□□ -1.76
LRRC47-203ENST00000479239 LOC107984156A0A0G2JMH3 177 aa4.02□□□□□ -1.77
LRRC47-203ENST00000479239 LECT2O14960 151 aa4.02□□□□□ -1.77
LRRC47-203ENST00000479239 RPL13AP40429 203 aaKnown RBP4.02□□□□□ -1.77
LRRC47-203ENST00000479239 PSMB2P49721 201 aa4.02□□□□□ -1.77
LRRC47-203ENST00000479239 ARL17AQ8IVW1 177 aa4.02□□□□□ -1.77
LRRC47-203ENST00000479239 TRAV13-2A0A0B4J235 113 aa4.01□□□□□ -1.77
LRRC47-203ENST00000479239 M0R2N4 97 aa4.01□□□□□ -1.77
LRRC47-203ENST00000479239 SCGB1C2P0DMR2 95 aa4.01□□□□□ -1.77
LRRC47-203ENST00000479239 UBE2V1Q13404 147 aa4.01□□□□□ -1.77
LRRC47-203ENST00000479239 GTF2H5Q6ZYL4 71 aa4.01□□□□□ -1.77
LRRC47-203ENST00000479239 CARD19Q96LW7 228 aa4.01□□□□□ -1.77
LRRC47-203ENST00000479239 SPCS1Q9Y6A9 102 aa4.01□□□□□ -1.77
LRRC47-203ENST00000479239 PLECQ15149 4684 aaKnown RBP4.01□□□□□ -1.77
LRRC47-203ENST00000479239 IGKV2-28A0A075B6P5 120 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 NDUFC2-KCTD14E9PQ53 114 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 K7EP34 96 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 NDUFC2O95298 119 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 LY6G6CO95867 125 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 IGKV2D-28P01615 120 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 SLPIP03973 132 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 PRR3P79522 188 aaKnown RBP4□□□□□ -1.77
LRRC47-203ENST00000479239 C14orf177Q52M58 125 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 LYRM7Q5U5X0 104 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 OR13C6PQ8NH95 151 aa4□□□□□ -1.77
LRRC47-203ENST00000479239 VPS13DQ5THJ4 4388 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 ALMS1Q8TCU4 4167 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 HECTD4Q9Y4D8 3996 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 COX6CP09669 75 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 WFDC2Q14508 124 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 GAGE2EQ4V326 116 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 LINC00337Q8N6G1 96 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 XAGE1AQ9HD64 81 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 GAGE2DQ9UEU5 116 aa3.99□□□□□ -1.77
LRRC47-203ENST00000479239 TRBV20-1A0A075B6N2 111 aa3.98□□□□□ -1.77
LRRC47-203ENST00000479239 NCR3O14931 201 aa3.98□□□□□ -1.77
LRRC47-203ENST00000479239 Q6ZR54 194 aa3.98□□□□□ -1.77
LRRC47-203ENST00000479239 Q6ZRN7 208 aaPredicted RBP3.98□□□□□ -1.77
LRRC47-203ENST00000479239 Q6ZRP5 223 aa3.98□□□□□ -1.77
LRRC47-203ENST00000479239 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
LRRC47-203ENST00000479239 LOC107984640A0A0U1RRK4 108 aa3.97□□□□□ -1.77
LRRC47-203ENST00000479239 LRCOL1A6NCL2 159 aa3.97□□□□□ -1.77
LRRC47-203ENST00000479239 TLX1NBP0CAT3 122 aa3.97□□□□□ -1.77
LRRC47-203ENST00000479239 CNBPP62633 177 aaKnown RBP3.97□□□□□ -1.77
LRRC47-203ENST00000479239 RPL18AQ02543 176 aaKnown RBP3.97□□□□□ -1.77
LRRC47-203ENST00000479239 GAGE2BQ13066 116 aa3.97□□□□□ -1.77
LRRC47-203ENST00000479239 S100A7L2Q5SY68 101 aa3.97□□□□□ -1.77
LRRC47-203ENST00000479239 Q8NDZ9 215 aa3.97□□□□□ -1.77
LRRC47-203ENST00000479239 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.96□□□□□ -1.78
LRRC47-203ENST00000479239 TRBV10-2A0A0K0K1G8 114 aa3.96□□□□□ -1.78
LRRC47-203ENST00000479239 H3BMG7 143 aa3.96□□□□□ -1.78
LRRC47-203ENST00000479239 TCL1BO95988 128 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms