RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 RELNP78509 3460 aa0.73□□□□□ -2.29
GARNL3-214ENST00000478696 ASPMQ8IZT6 3477 aa0.73□□□□□ -2.29
GARNL3-214ENST00000478696 NCOA2Q15596 1464 aa0.73□□□□□ -2.29
GARNL3-214ENST00000478696 MAGI2Q86UL8 1455 aa0.73□□□□□ -2.29
GARNL3-214ENST00000478696 RGPD8O14715 1765 aaPredicted RBP0.73□□□□□ -2.29
GARNL3-214ENST00000478696 LTN1O94822 1766 aa0.73□□□□□ -2.29
GARNL3-214ENST00000478696 AKAP12Q02952 1782 aa0.73□□□□□ -2.29
GARNL3-214ENST00000478696 EDC4Q6P2E9 1401 aaKnown RBP0.72□□□□□ -2.29
GARNL3-214ENST00000478696 NRAPQ86VF7 1730 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 ZZEF1O43149 2961 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 DSPP15924 2871 aaKnown RBP0.72□□□□□ -2.29
GARNL3-214ENST00000478696 VPS13AQ96RL7 3174 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 ASXL3Q9C0F0 2248 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 CDH23Q9H251 3354 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 UTP20O75691 2785 aaKnown RBP0.72□□□□□ -2.29
GARNL3-214ENST00000478696 EP300Q09472 2414 aaPredicted RBP0.72□□□□□ -2.29
GARNL3-214ENST00000478696 A0A0D9SG42 100 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 S100A3P33764 101 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 TDRG1Q3Y452 100 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 ETDBQ3ZM63 59 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 Q6JHZ5 121 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 ALKAL2Q6UX46 152 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 AGLP35573 1532 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 ATP7AQ04656 1500 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 ABCA10Q8WWZ4 1543 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 NOTCH1P46531 2555 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
GARNL3-214ENST00000478696 CCDC18Q5T9S5 1454 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 DOPEY2Q9Y3R5 2298 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 COL12A1Q99715 3063 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 KNDC1Q76NI1 1749 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 TIAM2Q8IVF5 1701 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 KIAA1551Q9HCM1 1747 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 FRYLO94915 3013 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
GARNL3-214ENST00000478696 COL4A6Q14031 1691 aa0.72□□□□□ -2.29
GARNL3-214ENST00000478696 NBEAL1Q6ZS30 2694 aa0.71□□□□□ -2.29
GARNL3-214ENST00000478696 FBN2P35556 2912 aa0.71□□□□□ -2.29
GARNL3-214ENST00000478696 CNOT1A5YKK6 2376 aaKnown RBP0.71□□□□□ -2.3
GARNL3-214ENST00000478696 ATRQ13535 2644 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 IGSF10Q6WRI0 2623 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 MROH1Q8NDA8 1641 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 DNAH14Q0VDD8 3507 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 CFAP74Q9C0B2 1584 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 NBEAL2Q6ZNJ1 2754 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 CHD7Q9P2D1 2997 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 FLNCQ14315 2725 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 RGPD3A6NKT7 1758 aaPredicted RBP0.71□□□□□ -2.3
GARNL3-214ENST00000478696 SIPA1L3O60292 1781 aaPredicted RBP0.71□□□□□ -2.3
GARNL3-214ENST00000478696 RGPD4Q7Z3J3 1758 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 FREM2Q5SZK8 3169 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 F8WEM9 126 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 ARMS2P0C7Q2 107 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 C10orf113Q5VZT2 155 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 S100A13Q99584 98 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 PRO3102Q9H379 93 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 C10orf95Q9H7T3 257 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 PSENENQ9NZ42 101 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 SPTA1P02549 2419 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 QSER1Q2KHR3 1735 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 LRRIQ1Q96JM4 1722 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 ANKRD26Q9UPS8 1709 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 LRRK2Q5S007 2527 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 PTPN23Q9H3S7 1636 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 BTAF1O14981 1849 aa0.71□□□□□ -2.3
GARNL3-214ENST00000478696 PKD1L1Q8TDX9 2849 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 CACNA1HO95180 2353 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 ABCC3O15438 1527 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 ERICH3Q5RHP9 1530 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 IFT172Q9UG01 1749 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 PARP4Q9UKK3 1724 aaKnown RBP0.7□□□□□ -2.3
GARNL3-214ENST00000478696 TLN1Q9Y490 2541 aaKnown RBP0.7□□□□□ -2.3
GARNL3-214ENST00000478696 IGF2RP11717 2491 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 ARHGAP35Q9NRY4 1499 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 NRXN1Q9ULB1 1477 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 A0A087WVE0 104 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 LEPROTL1O95214 131 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 SNRPFP62306 86 aaKnown RBP0.7□□□□□ -2.3
GARNL3-214ENST00000478696 NMSQ5H8A3 153 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 SSBP3-AS1Q7Z2R9 100 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 LAMA4Q16363 1823 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 PIK3C2BO00750 1634 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 STAB1Q9NY15 2570 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 MYO15AQ9UKN7 3530 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 RGPD5Q99666 1765 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 CACNA1EQ15878 2313 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 PCNX1Q96RV3 2341 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 IQGAP2Q13576 1575 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 LOC400499M0QZD8 3231 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 CELSR1Q9NYQ6 3014 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 AKAP13Q12802 2813 aa0.7□□□□□ -2.3
GARNL3-214ENST00000478696 ITPR1Q14643 2758 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 CENPEQ02224 2701 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 BOD1L1Q8NFC6 3051 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 MTORP42345 2549 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 MAP2P11137 1827 aaKnown RBP0.69□□□□□ -2.3
GARNL3-214ENST00000478696 NKTRP30414 1462 aaKnown RBP0.69□□□□□ -2.3
GARNL3-214ENST00000478696 LAMC1P11047 1609 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 PAPPAQ13219 1627 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 TRBV6-1A0A0K0K1D8 114 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms