RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 TNCP24821 2201 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 CACNA1CQ13936 2221 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 ABCA10Q8WWZ4 1543 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 LRRC7Q96NW7 1537 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 NCOA6Q14686 2063 aaPredicted RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 A0A0G2JMZ2 1700 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 LRRC37AA6NMS7 1700 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 XRN1Q8IZH2 1706 aaKnown RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 MYO5CQ9NQX4 1742 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 ADAMTS12P58397 1594 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 DNMBPQ6XZF7 1577 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 CACNA1BQ00975 2339 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 STRCP1A6NGW2 1772 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 JMJD1CQ15652 2540 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 SPTBN2O15020 2390 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 PIK3C2BO00750 1634 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 PAPPAQ13219 1627 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 TARBP1Q13395 1621 aaKnown RBP0.32□□□□□ -2.36
HDAC9-222ENST00000474742 PHRF1Q9P1Y6 1649 aaKnown RBP0.32□□□□□ -2.36
HDAC9-222ENST00000474742 TNRC6BQ9UPQ9 1833 aaKnown RBP0.32□□□□□ -2.36
HDAC9-222ENST00000474742 FAM208BQ5VWN6 2430 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 A0A096LNT2 108 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 LOC730098B7Z3J9 87 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 H0YGG7 62 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 H0YGX0 51 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 IFI6P09912 130 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 SPATA8Q6RVD6 105 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 SPRR4Q96PI1 79 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 PRO3102Q9H379 93 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 CMC2Q9NRP2 79 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 TIMM8BQ9Y5J9 83 aaPredicted RBP0.32□□□□□ -2.36
HDAC9-222ENST00000474742 PRXQ9BXM0 1461 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 PLCH1Q4KWH8 1693 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 PREX1Q8TCU6 1659 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 CNTRLQ7Z7A1 2325 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 LRRIQ1Q96JM4 1722 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 SYCP2Q9BX26 1530 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 SIPA1L3O60292 1781 aaPredicted RBP0.32□□□□□ -2.36
HDAC9-222ENST00000474742 ABCA8O94911 1581 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 SAMD9Q5K651 1589 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 UGGT1Q9NYU2 1555 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 DIP2BQ9P265 1576 aa0.32□□□□□ -2.36
HDAC9-222ENST00000474742 CEP170BQ9Y4F5 1589 aaPredicted RBP0.32□□□□□ -2.36
HDAC9-222ENST00000474742 IQGAP3Q86VI3 1631 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 USP32Q8NFA0 1604 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 AKAP6Q13023 2319 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 PTPRQQ9UMZ3 2332 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 SCN7AQ01118 1682 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 SHPRHQ149N8 1683 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 PPRC1Q5VV67 1664 aaKnown RBP0.31□□□□□ -2.36
HDAC9-222ENST00000474742 CFAP43Q8NDM7 1665 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 CTTNBP2Q8WZ74 1663 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 ZNF469Q96JG9 3925 aaPredicted RBP0.31□□□□□ -2.36
HDAC9-222ENST00000474742 CNOT1A5YKK6 2376 aaKnown RBP0.31□□□□□ -2.36
HDAC9-222ENST00000474742 FMN2Q9NZ56 1722 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 A0A087WTM6 91 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 DEFB131BA0A096LNP1 70 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 G3V318 75 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 H3BUA1 57 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 M0R1W7 72 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 KRTAP12-1P59990 96 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 DEFB114Q30KQ6 69 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 KRTAP21-3Q3LHN1 58 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 Q5BKY6 102 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 MINOS1Q5TGZ0 78 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 COX6B2Q6YFQ2 88 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 MRPL34Q9BQ48 92 aaKnown RBP0.31□□□□□ -2.36
HDAC9-222ENST00000474742 APLNQ9ULZ1 77 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 ZMYM4Q5VZL5 1548 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 ASXL1Q8IXJ9 1541 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 KDM3BQ7LBC6 1761 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 PKDREJQ9NTG1 2253 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 PLXNC1O60486 1568 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 SPTBN1Q01082 2364 aaKnown RBP0.31□□□□□ -2.36
HDAC9-222ENST00000474742 SHROOM2Q13796 1616 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 MADDQ8WXG6 1647 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 EIF2AK4Q9P2K8 1649 aaKnown RBP0.31□□□□□ -2.36
HDAC9-222ENST00000474742 ALKQ9UM73 1620 aa0.31□□□□□ -2.36
HDAC9-222ENST00000474742 CROCC2H7BZ55 1655 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 COL4A1P02462 1669 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 COL4A5P29400 1685 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 NHSQ6T4R5 1651 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 TIAM2Q8IVF5 1701 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 BCORQ6W2J9 1755 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 ROS1P08922 2347 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 PTPRZ1P23471 2315 aaPredicted RBP0.3□□□□□ -2.36
HDAC9-222ENST00000474742 ANKRD17O75179 2603 aaKnown RBP0.3□□□□□ -2.36
HDAC9-222ENST00000474742 ABCC6O95255 1503 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 F8P00451 2351 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 LINC00959A0A1B0GUT2 108 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 SMIM27A0A1W2PRY6 76 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 K7EQZ3 153 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 SPINK1P00995 79 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 LINC00158P58513 81 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 DEFB109BQ30KR1 87 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 PCOTHQ58A44 107 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 DEFB105AQ8NG35 78 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 KCNQ1DNQ9H478 68 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 C10orf95Q9H7T3 257 aa0.3□□□□□ -2.36
HDAC9-222ENST00000474742 C6orf48Q9UBA6 75 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms