RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 RABAC1Q9UI14 185 aa0.55□□□□□ -2.32
SMC5-202ENST00000471372 NKTRP30414 1462 aaKnown RBP0.54□□□□□ -2.32
SMC5-202ENST00000471372 GVINP1Q7Z2Y8 2422 aa0.54□□□□□ -2.32
SMC5-202ENST00000471372 MYMXA0A1B0GTQ4 84 aa0.54□□□□□ -2.32
SMC5-202ENST00000471372 CPSF4LA6NMK7 179 aaKnown RBP0.54□□□□□ -2.32
SMC5-202ENST00000471372 MED14O60244 1454 aa0.54□□□□□ -2.32
SMC5-202ENST00000471372 KIF14Q15058 1648 aa0.53□□□□□ -2.32
SMC5-202ENST00000471372 ALKQ9UM73 1620 aa0.53□□□□□ -2.32
SMC5-202ENST00000471372 PPLO60437 1756 aa0.53□□□□□ -2.32
SMC5-202ENST00000471372 NCOR2Q9Y618 2525 aa0.53□□□□□ -2.32
SMC5-202ENST00000471372 I3L3M4 83 aa0.53□□□□□ -2.32
SMC5-202ENST00000471372 KLK9Q2XQG4 91 aa0.53□□□□□ -2.32
SMC5-202ENST00000471372 LINC00643Q86TS7 51 aa0.53□□□□□ -2.32
SMC5-202ENST00000471372 DEFB105AQ8NG35 78 aa0.53□□□□□ -2.32
SMC5-202ENST00000471372 UACAQ9BZF9 1416 aa0.53□□□□□ -2.32
SMC5-202ENST00000471372 APLNQ9ULZ1 77 aa0.52□□□□□ -2.33
SMC5-202ENST00000471372 CELSR1Q9NYQ6 3014 aa0.52□□□□□ -2.33
SMC5-202ENST00000471372 A0A1B0GUT8 65 aa0.51□□□□□ -2.33
SMC5-202ENST00000471372 MAST4O15021 2626 aa0.51□□□□□ -2.33
SMC5-202ENST00000471372 ATP7BP35670 1465 aa0.51□□□□□ -2.33
SMC5-202ENST00000471372 PKD1L3Q7Z443 1732 aa0.51□□□□□ -2.33
SMC5-202ENST00000471372 VWFP04275 2813 aa0.5□□□□□ -2.33
SMC5-202ENST00000471372 CHD6Q8TD26 2715 aa0.49□□□□□ -2.33
SMC5-202ENST00000471372 SPTY2D1-AS1A0A0U1RR47 76 aa0.49□□□□□ -2.33
SMC5-202ENST00000471372 KIF20BQ96Q89 1820 aa0.49□□□□□ -2.33
SMC5-202ENST00000471372 HRNRQ86YZ3 2850 aaPredicted RBP0.49□□□□□ -2.33
SMC5-202ENST00000471372 TENM4Q6N022 2769 aa0.48□□□□□ -2.33
SMC5-202ENST00000471372 TMEM131LA2VDJ0 1609 aa0.48□□□□□ -2.33
SMC5-202ENST00000471372 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
SMC5-202ENST00000471372 MAP3K4Q9Y6R4 1608 aa0.46□□□□□ -2.34
SMC5-202ENST00000471372 IGSF10Q6WRI0 2623 aa0.46□□□□□ -2.34
SMC5-202ENST00000471372 UBR5O95071 2799 aaPredicted RBP0.45□□□□□ -2.34
SMC5-202ENST00000471372 HIVEP3Q5T1R4 2406 aa0.45□□□□□ -2.34
SMC5-202ENST00000471372 LRRC7Q96NW7 1537 aa0.45□□□□□ -2.34
SMC5-202ENST00000471372 RGPD1P0DJD0 1748 aa0.45□□□□□ -2.34
SMC5-202ENST00000471372 SPINK4O60575 86 aa0.45□□□□□ -2.34
SMC5-202ENST00000471372 MRPL34Q9BQ48 92 aaKnown RBP0.45□□□□□ -2.34
SMC5-202ENST00000471372 WNK2Q9Y3S1 2297 aa0.45□□□□□ -2.34
SMC5-202ENST00000471372 RGPD2P0DJD1 1756 aa0.45□□□□□ -2.34
SMC5-202ENST00000471372 CCDC18Q5T9S5 1454 aa0.44□□□□□ -2.34
SMC5-202ENST00000471372 MAGI2Q86UL8 1455 aa0.44□□□□□ -2.34
SMC5-202ENST00000471372 CEBPZOSA8MTT3 80 aa0.44□□□□□ -2.34
SMC5-202ENST00000471372 ACYP1P07311 99 aa0.44□□□□□ -2.34
SMC5-202ENST00000471372 NCOR1O75376 2440 aa0.44□□□□□ -2.34
SMC5-202ENST00000471372 HUWE1Q7Z6Z7 4374 aaKnown RBP0.43□□□□□ -2.34
SMC5-202ENST00000471372 COX7BP24311 80 aa0.43□□□□□ -2.34
SMC5-202ENST00000471372 KANTRA0A1W2PQU2 76 aa0.41□□□□□ -2.34
SMC5-202ENST00000471372 H1FX-AS1Q4G0G2 97 aa0.41□□□□□ -2.34
SMC5-202ENST00000471372 GAFA1Q96PS6 74 aa0.41□□□□□ -2.34
SMC5-202ENST00000471372 COL14A1Q05707 1796 aaKnown RBP0.41□□□□□ -2.34
SMC5-202ENST00000471372 TRAV21A0A0B4J279 112 aa0.39□□□□□ -2.35
SMC5-202ENST00000471372 PRM1P04553 51 aa0.39□□□□□ -2.35
SMC5-202ENST00000471372 ST20Q9HBF5 79 aa0.39□□□□□ -2.35
SMC5-202ENST00000471372 SUPT6HQ7KZ85 1726 aaKnown RBP0.38□□□□□ -2.35
SMC5-202ENST00000471372 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
SMC5-202ENST00000471372 S100A13Q99584 98 aa0.38□□□□□ -2.35
SMC5-202ENST00000471372 QSER1Q2KHR3 1735 aa0.38□□□□□ -2.35
SMC5-202ENST00000471372 MYCBP2O75592 4640 aa0.37□□□□□ -2.35
SMC5-202ENST00000471372 ABCA2Q9BZC7 2435 aa0.37□□□□□ -2.35
SMC5-202ENST00000471372 ADIRFQ15847 76 aa0.37□□□□□ -2.35
SMC5-202ENST00000471372 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
SMC5-202ENST00000471372 UBR3Q6ZT12 1888 aa0.37□□□□□ -2.35
SMC5-202ENST00000471372 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
SMC5-202ENST00000471372 LELP1Q5T871 98 aa0.36□□□□□ -2.35
SMC5-202ENST00000471372 PTPN13Q12923 2485 aa0.35□□□□□ -2.35
SMC5-202ENST00000471372 CLIP1P30622 1438 aa0.35□□□□□ -2.35
SMC5-202ENST00000471372 LRRC9Q6ZRR7 1453 aa0.35□□□□□ -2.35
SMC5-202ENST00000471372 CSPG4Q6UVK1 2322 aa0.35□□□□□ -2.35
SMC5-202ENST00000471372 PKD1L1Q8TDX9 2849 aa0.34□□□□□ -2.35
SMC5-202ENST00000471372 WFDC9Q8NEX5 89 aa0.34□□□□□ -2.36
SMC5-202ENST00000471372 DIP2BQ9P265 1576 aa0.34□□□□□ -2.36
SMC5-202ENST00000471372 KMT2DO14686 5537 aa0.34□□□□□ -2.36
SMC5-202ENST00000471372 ARHGAP35Q9NRY4 1499 aa0.34□□□□□ -2.36
SMC5-202ENST00000471372 ATRQ13535 2644 aa0.34□□□□□ -2.36
SMC5-202ENST00000471372 CCL22O00626 93 aa0.33□□□□□ -2.36
SMC5-202ENST00000471372 ERVK-7P63135 1459 aa0.33□□□□□ -2.36
SMC5-202ENST00000471372 CACNA1AO00555 2505 aa0.33□□□□□ -2.36
SMC5-202ENST00000471372 TNXBP22105 4242 aa0.33□□□□□ -2.36
SMC5-202ENST00000471372 USP32Q8NFA0 1604 aa0.32□□□□□ -2.36
SMC5-202ENST00000471372 HEPN1Q6WQI6 88 aa0.32□□□□□ -2.36
SMC5-202ENST00000471372 FSIP2Q5CZC0 6907 aa0.32□□□□□ -2.36
SMC5-202ENST00000471372 BCORQ6W2J9 1755 aa0.32□□□□□ -2.36
SMC5-202ENST00000471372 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
SMC5-202ENST00000471372 ZNF831Q5JPB2 1677 aa0.3□□□□□ -2.36
SMC5-202ENST00000471372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.3□□□□□ -2.36
SMC5-202ENST00000471372 LOC730098B7Z3J9 87 aa0.3□□□□□ -2.36
SMC5-202ENST00000471372 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.3□□□□□ -2.36
SMC5-202ENST00000471372 NCOA2Q15596 1464 aa0.29□□□□□ -2.36
SMC5-202ENST00000471372 H3BUT2 72 aa0.28□□□□□ -2.36
SMC5-202ENST00000471372 URB2Q14146 1524 aaKnown RBP0.28□□□□□ -2.37
SMC5-202ENST00000471372 DCAF1Q9Y4B6 1507 aa0.28□□□□□ -2.37
SMC5-202ENST00000471372 SPTA1P02549 2419 aa0.27□□□□□ -2.37
SMC5-202ENST00000471372 RPL38P63173 70 aaKnown RBP0.27□□□□□ -2.37
SMC5-202ENST00000471372 POLR1AO95602 1720 aaPredicted RBP0.27□□□□□ -2.37
SMC5-202ENST00000471372 NDUFB1O75438 58 aa0.26□□□□□ -2.37
SMC5-202ENST00000471372 PREX1Q8TCU6 1659 aa0.26□□□□□ -2.37
SMC5-202ENST00000471372 COL7A1Q02388 2944 aa0.26□□□□□ -2.37
SMC5-202ENST00000471372 LPAP08519 4548 aa0.26□□□□□ -2.37
SMC5-202ENST00000471372 MAP1BP46821 2468 aaKnown RBP0.25□□□□□ -2.37
SMC5-202ENST00000471372 CDKN2A-AS1Q9UH64 79 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms