RNA–Protein interactions for RNA: ENST00000468874.2

TMEM50B-206, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 724 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-206ENST00000468874 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 A0A0J9YXV3 536 aa4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 ZNF815PA8K554 130 aa4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 J3QQQ9 107 aa4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 CCL25O15444 150 aa4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 OPRPNQ99935 248 aaPredicted RBP4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 GEMIN7Q9H840 131 aaKnown RBP4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 CDC42SE2Q9NRR3 84 aa4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 SPANXB1Q9NS25 103 aaPredicted RBP4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
TMEM50B-206ENST00000468874 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
TMEM50B-206ENST00000468874 IGHV1-58A0A0C4DH39 117 aa4.48□□□□□ -1.69
TMEM50B-206ENST00000468874 A0A1B0GV90 55 aa4.48□□□□□ -1.69
TMEM50B-206ENST00000468874 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
TMEM50B-206ENST00000468874 C14orf177Q52M58 125 aa4.48□□□□□ -1.69
TMEM50B-206ENST00000468874 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
TMEM50B-206ENST00000468874 TP73-AS1Q9UF72 201 aa4.48□□□□□ -1.69
TMEM50B-206ENST00000468874 LOC100131303A0A0U1RQF7 123 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 IGHV3-30P01768 117 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 IGHV3-33P01772 117 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 IGHV3-30-3P0DP02 117 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 IGHV3-30-5P0DP03 117 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 LINC00242Q5T6M2 205 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 SCGB1D4Q6XE38 83 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 Q6ZVH6 145 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 CEND1Q8N111 149 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 LINC00469Q8N7U9 141 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 CHCHD5Q9BSY4 110 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 MUC2Q02817 5179 aa4.47□□□□□ -1.69
TMEM50B-206ENST00000468874 A0A1B0GWB2 263 aa4.46□□□□□ -1.7
TMEM50B-206ENST00000468874 TMEM238C9JI98 176 aa4.46□□□□□ -1.7
TMEM50B-206ENST00000468874 TIMM17BO60830 172 aa4.46□□□□□ -1.7
TMEM50B-206ENST00000468874 SFTA2Q6UW10 78 aa4.46□□□□□ -1.7
TMEM50B-206ENST00000468874 REG3GQ6UW15 175 aa4.46□□□□□ -1.7
TMEM50B-206ENST00000468874 LINC01561Q8N1V8 128 aa4.46□□□□□ -1.7
TMEM50B-206ENST00000468874 HIST1H4GQ99525 98 aa4.46□□□□□ -1.7
TMEM50B-206ENST00000468874 TTTY13Q9BZ97 58 aa4.46□□□□□ -1.7
TMEM50B-206ENST00000468874 PPDPFQ9H3Y8 114 aa4.46□□□□□ -1.7
TMEM50B-206ENST00000468874 A0A0J9YXY3 114 aa4.45□□□□□ -1.7
TMEM50B-206ENST00000468874 TAX1BP3O14907 124 aa4.45□□□□□ -1.7
TMEM50B-206ENST00000468874 SMIM13P0DJ93 91 aa4.45□□□□□ -1.7
TMEM50B-206ENST00000468874 TSPEAR-AS2P59090 65 aa4.45□□□□□ -1.7
TMEM50B-206ENST00000468874 COPS9Q8WXC6 57 aa4.45□□□□□ -1.7
TMEM50B-206ENST00000468874 CDKN2A-AS1Q9UH64 79 aa4.45□□□□□ -1.7
TMEM50B-206ENST00000468874 TRAV13-1A0A0B4J241 112 aa4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 SMIM1B2RUZ4 78 aa4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 PANO1I0J062 215 aa4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 NDUFA1O15239 70 aa4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 FXYD2P54710 66 aa4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 HERV-K104P63124 156 aa4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 GAGE6Q13070 117 aa4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 SRSF9Q13242 221 aaKnown RBP eCLIP4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 RNASE13Q5GAN3 156 aaKnown RBP4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 CFAP161Q6P656 301 aa4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 NDUFA12Q9UI09 145 aa4.44□□□□□ -1.7
TMEM50B-206ENST00000468874 A0A087WZ39 114 aa4.43□□□□□ -1.7
TMEM50B-206ENST00000468874 IFITM1P13164 125 aa4.43□□□□□ -1.7
TMEM50B-206ENST00000468874 RBX1P62877 108 aa4.43□□□□□ -1.7
TMEM50B-206ENST00000468874 RPL24P83731 157 aaKnown RBP4.43□□□□□ -1.7
TMEM50B-206ENST00000468874 C9orf163Q8N9P6 203 aa4.43□□□□□ -1.7
TMEM50B-206ENST00000468874 C7orf33Q8WU49 177 aa4.43□□□□□ -1.7
TMEM50B-206ENST00000468874 SPANXDQ9BXN6 97 aa4.43□□□□□ -1.7
TMEM50B-206ENST00000468874 SPANXCQ9NY87 97 aa4.43□□□□□ -1.7
TMEM50B-206ENST00000468874 IGLV4-60A0A075B6I1 120 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 IGKV2D-24A0A075B6R9 120 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 IGHV3OR16-9A0A0B4J2B5 98 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 LINC00959A0A1B0GUT2 108 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 SPINK8P0C7L1 97 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 COX6A2Q02221 97 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 UBE2V1Q13404 147 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 CIRBPQ14011 172 aaKnown RBP4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 SS18Q15532 418 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 SPINK6Q6UWN8 80 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 DPH3Q96FX2 82 aa4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 NHP2Q9NX24 153 aaKnown RBP4.42□□□□□ -1.7
TMEM50B-206ENST00000468874 TMEM262E9PQX1 116 aa4.41□□□□□ -1.7
TMEM50B-206ENST00000468874 FABP2P12104 132 aa4.41□□□□□ -1.7
TMEM50B-206ENST00000468874 VAMP3Q15836 100 aa4.41□□□□□ -1.7
TMEM50B-206ENST00000468874 MIAQ16674 131 aa4.41□□□□□ -1.7
TMEM50B-206ENST00000468874 GTF2H5Q6ZYL4 71 aa4.41□□□□□ -1.7
TMEM50B-206ENST00000468874 ZNF625Q96I27 306 aaPredicted RBP4.41□□□□□ -1.7
TMEM50B-206ENST00000468874 LITAFQ99732 161 aa4.41□□□□□ -1.7
TMEM50B-206ENST00000468874 IGHV3-64A0A075B6Q5 118 aa4.4□□□□□ -1.71
TMEM50B-206ENST00000468874 A0A0B4J2C4 111 aa4.4□□□□□ -1.71
TMEM50B-206ENST00000468874 A0A1W2PPM0 123 aa4.4□□□□□ -1.71
TMEM50B-206ENST00000468874 CXCL5P42830 114 aa4.4□□□□□ -1.71
TMEM50B-206ENST00000468874 LYRM7Q5U5X0 104 aa4.4□□□□□ -1.71
TMEM50B-206ENST00000468874 CD164L2Q6UWJ8 174 aa4.4□□□□□ -1.71
TMEM50B-206ENST00000468874 SDIM1Q6ZPB5 146 aa4.4□□□□□ -1.71
TMEM50B-206ENST00000468874 COX7B2Q8TF08 81 aa4.4□□□□□ -1.71
TMEM50B-206ENST00000468874 PRR34Q9NV39 138 aa4.4□□□□□ -1.71
TMEM50B-206ENST00000468874 LPAP08519 4548 aa4.39□□□□□ -1.71
TMEM50B-206ENST00000468874 TRAV8-4A0A0B4J246 113 aa4.39□□□□□ -1.71
TMEM50B-206ENST00000468874 K7EP34 96 aa4.39□□□□□ -1.71
TMEM50B-206ENST00000468874 REG3AQ06141 175 aa4.39□□□□□ -1.71
TMEM50B-206ENST00000468874 Q8IZM0 81 aa4.39□□□□□ -1.71
TMEM50B-206ENST00000468874 GAGE10A6NGK3 116 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms