RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 HIST2H2BEQ16778 126 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-207ENST00000467273 CFAP126Q5VTH2 177 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 PHF5AQ7RTV0 110 aaKnown RBP3.36□□□□□ -1.87
PTCD3-207ENST00000467273 TEN1Q86WV5 123 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 Q8TAT8 98 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 HIST1H2BHQ93079 126 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 AQP10Q96PS8 301 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 TIMM17AQ99595 171 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 HIST1H2BNQ99877 126 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 HIST1H2BMQ99879 126 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 GFRA4Q9GZZ7 299 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 KLK12Q9UKR0 248 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 TIMM9Q9Y5J7 89 aa3.36□□□□□ -1.87
PTCD3-207ENST00000467273 IGHV3-64A0A075B6Q5 118 aa3.35□□□□□ -1.87
PTCD3-207ENST00000467273 HBBP68871 147 aa3.35□□□□□ -1.87
PTCD3-207ENST00000467273 CCL20P78556 96 aa3.35□□□□□ -1.87
PTCD3-207ENST00000467273 MIAQ16674 131 aa3.35□□□□□ -1.87
PTCD3-207ENST00000467273 ZFP2Q6ZN57 461 aa3.35□□□□□ -1.87
PTCD3-207ENST00000467273 Q6ZQT7 251 aa3.35□□□□□ -1.87
PTCD3-207ENST00000467273 COPS9Q8WXC6 57 aa3.35□□□□□ -1.87
PTCD3-207ENST00000467273 RAB37Q96AX2 223 aa3.35□□□□□ -1.87
PTCD3-207ENST00000467273 PSORS1C2Q9UIG4 136 aa3.35□□□□□ -1.87
PTCD3-207ENST00000467273 IGKV2-40A0A087WW87 121 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-207ENST00000467273 K7EP34 96 aa3.34□□□□□ -1.87
PTCD3-207ENST00000467273 IGKV2D-40P01614 121 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-207ENST00000467273 CRPP02741 224 aa3.34□□□□□ -1.87
PTCD3-207ENST00000467273 MT-ATP8P03928 68 aa3.34□□□□□ -1.87
PTCD3-207ENST00000467273 UBE2BP63146 152 aa3.34□□□□□ -1.87
PTCD3-207ENST00000467273 PCP2Q8IVA1 136 aa3.34□□□□□ -1.87
PTCD3-207ENST00000467273 SND1-IT1Q9HBX3 110 aa3.34□□□□□ -1.87
PTCD3-207ENST00000467273 PSENENQ9NZ42 101 aa3.34□□□□□ -1.87
PTCD3-207ENST00000467273 UQCR10Q9UDW1 63 aa3.34□□□□□ -1.87
PTCD3-207ENST00000467273 KRTAP4-16G5E9R7 235 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-207ENST00000467273 HLA-DQA1P01909 254 aa3.33□□□□□ -1.88
PTCD3-207ENST00000467273 FABP4P15090 132 aa3.33□□□□□ -1.88
PTCD3-207ENST00000467273 CSN1S1P47710 185 aa3.33□□□□□ -1.88
PTCD3-207ENST00000467273 LINC01545Q5VT33 79 aa3.33□□□□□ -1.88
PTCD3-207ENST00000467273 ENHOQ6UWT2 76 aa3.33□□□□□ -1.88
PTCD3-207ENST00000467273 SMIM4Q8WVI0 70 aa3.33□□□□□ -1.88
PTCD3-207ENST00000467273 HIST1H2BLQ99880 126 aa3.33□□□□□ -1.88
PTCD3-207ENST00000467273 SERP1Q9Y6X1 66 aa3.33□□□□□ -1.88
PTCD3-207ENST00000467273 TRAV21A0A0B4J279 112 aa3.32□□□□□ -1.88
PTCD3-207ENST00000467273 MUC21A0A0G2JKD1 596 aa3.32□□□□□ -1.88
PTCD3-207ENST00000467273 H3BT86 120 aa3.32□□□□□ -1.88
PTCD3-207ENST00000467273 GNRH2O43555 120 aa3.32□□□□□ -1.88
PTCD3-207ENST00000467273 TRACP01848 142 aa3.32□□□□□ -1.88
PTCD3-207ENST00000467273 S100A4P26447 101 aaKnown RBP3.32□□□□□ -1.88
PTCD3-207ENST00000467273 CXCL6P80162 114 aa3.32□□□□□ -1.88
PTCD3-207ENST00000467273 LINC01554Q52M75 96 aa3.32□□□□□ -1.88
PTCD3-207ENST00000467273 GTSF1Q8WW33 167 aa3.32□□□□□ -1.88
PTCD3-207ENST00000467273 MGST2Q99735 147 aa3.32□□□□□ -1.88
PTCD3-207ENST00000467273 TRBV20-1A0A075B6N2 111 aa3.31□□□□□ -1.88
PTCD3-207ENST00000467273 A0A1B0GW54 56 aa3.31□□□□□ -1.88
PTCD3-207ENST00000467273 K7ERJ3 54 aa3.31□□□□□ -1.88
PTCD3-207ENST00000467273 NDUFB6O95139 128 aa3.31□□□□□ -1.88
PTCD3-207ENST00000467273 PRELID3AQ96N28 172 aa3.31□□□□□ -1.88
PTCD3-207ENST00000467273 PRR34Q9NV39 138 aa3.31□□□□□ -1.88
PTCD3-207ENST00000467273 IL36BQ9NZH7 164 aa3.31□□□□□ -1.88
PTCD3-207ENST00000467273 DHRS4-AS1Q9P1J3 65 aa3.31□□□□□ -1.88
PTCD3-207ENST00000467273 LINC00474Q9P2X8 69 aa3.31□□□□□ -1.88
PTCD3-207ENST00000467273 IGLV10-54A0A075B6I4 117 aa3.3□□□□□ -1.88
PTCD3-207ENST00000467273 IGHV3-73A0A0B4J1V6 119 aa3.3□□□□□ -1.88
PTCD3-207ENST00000467273 TRBV10-1A0A0K0K1A3 114 aa3.3□□□□□ -1.88
PTCD3-207ENST00000467273 SSSCA1O60232 199 aa3.3□□□□□ -1.88
PTCD3-207ENST00000467273 HIST1H2BKO60814 126 aa3.3□□□□□ -1.88
PTCD3-207ENST00000467273 HIST1H2BJP06899 126 aa3.3□□□□□ -1.88
PTCD3-207ENST00000467273 TRGC1P0CF51 173 aa3.3□□□□□ -1.88
PTCD3-207ENST00000467273 TAS2R45P59539 299 aa3.3□□□□□ -1.88
PTCD3-207ENST00000467273 KRTAP26-1Q6PEX3 210 aa3.3□□□□□ -1.88
PTCD3-207ENST00000467273 TRBV6-8A0A0A6YYG3 113 aa3.29□□□□□ -1.88
PTCD3-207ENST00000467273 F8W1H4 67 aa3.29□□□□□ -1.88
PTCD3-207ENST00000467273 SFT2D2O95562 160 aa3.29□□□□□ -1.88
PTCD3-207ENST00000467273 HBDP02042 147 aa3.29□□□□□ -1.88
PTCD3-207ENST00000467273 ANGP03950 147 aaKnown RBP3.29□□□□□ -1.88
PTCD3-207ENST00000467273 TPT1P13693 172 aaKnown RBP3.29□□□□□ -1.88
PTCD3-207ENST00000467273 FAUP35544 74 aaKnown RBP3.29□□□□□ -1.88
PTCD3-207ENST00000467273 LSM3P62310 102 aaKnown RBP3.29□□□□□ -1.88
PTCD3-207ENST00000467273 MIC13Q5XKP0 118 aa3.29□□□□□ -1.88
PTCD3-207ENST00000467273 EPDR1Q9UM22 224 aa3.29□□□□□ -1.88
PTCD3-207ENST00000467273 IGLV1-50A0A075B6I6 118 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 TRBV7-3A0A075B6L6 115 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 C7orf66A4D0T2 115 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 UBE2D3P61077 147 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 UBE2D2P62837 147 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 MPV17L2Q567V2 206 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 C7orf65Q6ZTY9 151 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 DAND5Q8N907 189 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 OR2T35Q8NGX2 323 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 FAM167A-AS1Q96KT0 104 aa3.28□□□□□ -1.88
PTCD3-207ENST00000467273 IGLV8-61A0A075B6I0 122 aa3.27□□□□□ -1.89
PTCD3-207ENST00000467273 FAM24AA6NFZ4 105 aa3.27□□□□□ -1.89
PTCD3-207ENST00000467273 SNCGO76070 127 aa3.27□□□□□ -1.89
PTCD3-207ENST00000467273 RNASE3P12724 160 aaKnown RBP3.27□□□□□ -1.89
PTCD3-207ENST00000467273 RPS10P46783 165 aaKnown RBP3.27□□□□□ -1.89
PTCD3-207ENST00000467273 COX6A2Q02221 97 aa3.27□□□□□ -1.89
PTCD3-207ENST00000467273 C14orf178Q8N769 122 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms