RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ACACBO00763 2458 aa6.16□□□□□ -1.42
BRCA1-205ENST00000461221 COL4A4P53420 1690 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-205ENST00000461221 FAM19A4Q96LR4 140 aa6.16□□□□□ -1.42
BRCA1-205ENST00000461221 MRPL34Q9BQ48 92 aaKnown RBP6.16□□□□□ -1.42
BRCA1-205ENST00000461221 COA5Q86WW8 74 aa6.15□□□□□ -1.42
BRCA1-205ENST00000461221 OTOGLQ3ZCN5 2332 aa6.15□□□□□ -1.42
BRCA1-205ENST00000461221 LINC00315P59091 139 aa6.15□□□□□ -1.43
BRCA1-205ENST00000461221 RPL37AP61513 92 aaKnown RBP6.15□□□□□ -1.43
BRCA1-205ENST00000461221 PRO3102Q9H379 93 aa6.15□□□□□ -1.43
BRCA1-205ENST00000461221 NAV3Q8IVL0 2385 aa6.15□□□□□ -1.43
BRCA1-205ENST00000461221 ST20-AS1Q8NBB2 130 aa6.14□□□□□ -1.43
BRCA1-205ENST00000461221 ATRXP46100 2492 aa6.14□□□□□ -1.43
BRCA1-205ENST00000461221 RAI1Q7Z5J4 1906 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-205ENST00000461221 PRO0461Q9UI25 63 aa6.14□□□□□ -1.43
BRCA1-205ENST00000461221 EXPH5Q8NEV8 1989 aa6.14□□□□□ -1.43
BRCA1-205ENST00000461221 SONP18583 2426 aaKnown RBP6.14□□□□□ -1.43
BRCA1-205ENST00000461221 GVQW2A0A096LPI5 108 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-205ENST00000461221 NBDYA0A0U1RRE5 68 aa6.13□□□□□ -1.43
BRCA1-205ENST00000461221 APLNQ9ULZ1 77 aa6.13□□□□□ -1.43
BRCA1-205ENST00000461221 AGRNO00468 2067 aa6.13□□□□□ -1.43
BRCA1-205ENST00000461221 SPG11Q96JI7 2443 aa6.12□□□□□ -1.43
BRCA1-205ENST00000461221 CHTF8P0CG12 524 aa6.12□□□□□ -1.43
BRCA1-205ENST00000461221 A0A1W2PPR1 153 aa6.12□□□□□ -1.43
BRCA1-205ENST00000461221 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
BRCA1-205ENST00000461221 COX6B2Q6YFQ2 88 aa6.11□□□□□ -1.43
BRCA1-205ENST00000461221 A8MUN3 132 aa6.11□□□□□ -1.43
BRCA1-205ENST00000461221 PTPRSQ13332 1948 aa6.1□□□□□ -1.43
BRCA1-205ENST00000461221 CEP192Q8TEP8 1941 aa6.1□□□□□ -1.43
BRCA1-205ENST00000461221 NOTCH2Q04721 2471 aa6.09□□□□□ -1.43
BRCA1-205ENST00000461221 J3QL48 77 aa6.09□□□□□ -1.43
BRCA1-205ENST00000461221 HIVEP3Q5T1R4 2406 aa6.09□□□□□ -1.43
BRCA1-205ENST00000461221 K7EQZ3 153 aa6.09□□□□□ -1.44
BRCA1-205ENST00000461221 MUC22E2RYF6 1773 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-205ENST00000461221 IGLV6-57P01721 117 aa6.08□□□□□ -1.44
BRCA1-205ENST00000461221 UTRNP46939 3433 aa6.08□□□□□ -1.44
BRCA1-205ENST00000461221 LRP4O75096 1905 aa6.08□□□□□ -1.44
BRCA1-205ENST00000461221 LINC00588Q9Y4M8 146 aa6.07□□□□□ -1.44
BRCA1-205ENST00000461221 PTPN13Q12923 2485 aa6.07□□□□□ -1.44
BRCA1-205ENST00000461221 C8orf17Q9NRJ1 99 aa6.06□□□□□ -1.44
BRCA1-205ENST00000461221 MUC4Q99102 2169 aa6.06□□□□□ -1.44
BRCA1-205ENST00000461221 C10orf142B7Z368 130 aa6.05□□□□□ -1.44
BRCA1-205ENST00000461221 CD164Q04900 197 aa6.05□□□□□ -1.44
BRCA1-205ENST00000461221 CUL9Q8IWT3 2517 aa6.05□□□□□ -1.44
BRCA1-205ENST00000461221 COL5A1P20908 1838 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-205ENST00000461221 CACNA1AO00555 2505 aa6.05□□□□□ -1.44
BRCA1-205ENST00000461221 ADAMTS20P59510 1910 aa6.05□□□□□ -1.44
BRCA1-205ENST00000461221 DNAH10OSP0CZ25 163 aa6.04□□□□□ -1.44
BRCA1-205ENST00000461221 IGLV1-50A0A075B6I6 118 aa6.04□□□□□ -1.44
BRCA1-205ENST00000461221 CPAMD8Q8IZJ3 1885 aa6.04□□□□□ -1.44
BRCA1-205ENST00000461221 Q8NAQ8 132 aa6.04□□□□□ -1.44
BRCA1-205ENST00000461221 GOLGB1Q14789 3259 aaKnown RBP6.04□□□□□ -1.44
BRCA1-205ENST00000461221 USP34Q70CQ2 3546 aa6.04□□□□□ -1.44
BRCA1-205ENST00000461221 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
BRCA1-205ENST00000461221 PCNTO95613 3336 aa6.04□□□□□ -1.44
BRCA1-205ENST00000461221 C2CD3Q4AC94 2353 aa6.04□□□□□ -1.44
BRCA1-205ENST00000461221 DSCR10P59022 87 aa6.03□□□□□ -1.44
BRCA1-205ENST00000461221 NAV2Q8IVL1 2488 aa6.03□□□□□ -1.44
BRCA1-205ENST00000461221 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
BRCA1-205ENST00000461221 A0A1B0GVX0 72 aa6.03□□□□□ -1.44
BRCA1-205ENST00000461221 LCA10Q71F78 164 aa6.03□□□□□ -1.44
BRCA1-205ENST00000461221 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
BRCA1-205ENST00000461221 LINC00304Q8N9R0 145 aa6.03□□□□□ -1.44
BRCA1-205ENST00000461221 C9orf129Q5T035 196 aaKnown RBP6.02□□□□□ -1.45
BRCA1-205ENST00000461221 WWC2-AS2Q96NR7 200 aa6.02□□□□□ -1.45
BRCA1-205ENST00000461221 LITAFQ99732 161 aa6.02□□□□□ -1.45
BRCA1-205ENST00000461221 IGFL1Q6UW32 110 aa6.02□□□□□ -1.45
BRCA1-205ENST00000461221 KTN1-AS1Q86SY8 53 aa6.01□□□□□ -1.45
BRCA1-205ENST00000461221 KLKP1Q107X0 134 aa6.01□□□□□ -1.45
BRCA1-205ENST00000461221 FAM168BA1KXE4 195 aa6□□□□□ -1.45
BRCA1-205ENST00000461221 LINC00528Q8N1L1 170 aa6□□□□□ -1.45
BRCA1-205ENST00000461221 RBM12B-AS1Q9P1G2 102 aa6□□□□□ -1.45
BRCA1-205ENST00000461221 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
BRCA1-205ENST00000461221 TET2Q6N021 2002 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-205ENST00000461221 IGLV5-37A0A075B6J1 123 aa5.99□□□□□ -1.45
BRCA1-205ENST00000461221 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
BRCA1-205ENST00000461221 DOPEY1Q5JWR5 2465 aa5.98□□□□□ -1.45
BRCA1-205ENST00000461221 BDP1A6H8Y1 2624 aa5.97□□□□□ -1.45
BRCA1-205ENST00000461221 KRTAP24-1Q3LI83 254 aa5.97□□□□□ -1.45
BRCA1-205ENST00000461221 ZNF861PO60384 105 aa5.97□□□□□ -1.45
BRCA1-205ENST00000461221 LINC01554Q52M75 96 aa5.96□□□□□ -1.45
BRCA1-205ENST00000461221 ABCA2Q9BZC7 2435 aa5.96□□□□□ -1.45
BRCA1-205ENST00000461221 C9orf92A6NGG3 77 aa5.96□□□□□ -1.46
BRCA1-205ENST00000461221 FAM104AQ969W3 186 aa5.95□□□□□ -1.46
BRCA1-205ENST00000461221 MYO18BQ8IUG5 2567 aa5.95□□□□□ -1.46
BRCA1-205ENST00000461221 SPANXA2-OT1Q8N9U9 137 aa5.95□□□□□ -1.46
BRCA1-205ENST00000461221 PLA2G2DQ9UNK4 145 aa5.94□□□□□ -1.46
BRCA1-205ENST00000461221 CENPFP49454 3210 aa5.93□□□□□ -1.46
BRCA1-205ENST00000461221 KLK9Q2XQG4 91 aa5.92□□□□□ -1.46
BRCA1-205ENST00000461221 Q8N377 158 aa5.92□□□□□ -1.46
BRCA1-205ENST00000461221 C15orf56Q8N910 161 aa5.92□□□□□ -1.46
BRCA1-205ENST00000461221 H7BZZ5 65 aa5.92□□□□□ -1.46
BRCA1-205ENST00000461221 LINC00336Q6ZUF6 198 aa5.92□□□□□ -1.46
BRCA1-205ENST00000461221 CCDC168Q8NDH2 2452 aa5.92□□□□□ -1.46
BRCA1-205ENST00000461221 TLX1NBP0CAT3 122 aa5.92□□□□□ -1.46
BRCA1-205ENST00000461221 A0A0D9SG42 100 aa5.91□□□□□ -1.46
BRCA1-205ENST00000461221 PRR34Q9NV39 138 aa5.9□□□□□ -1.46
BRCA1-205ENST00000461221 LINC00483Q53H64 154 aa5.9□□□□□ -1.46
BRCA1-205ENST00000461221 IGLV5-48A0A075B6I7 105 aa5.89□□□□□ -1.47
BRCA1-205ENST00000461221 IGLV7-43P04211 117 aa5.88□□□□□ -1.47
BRCA1-205ENST00000461221 PTPRBP23467 1997 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms