RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 IGHV3-33P01772 117 aa7.01□□□□□ -1.29
USP39-210ENST00000459775 IGHV3-30-3P0DP02 117 aa7.01□□□□□ -1.29
USP39-210ENST00000459775 IGHV3-30-5P0DP03 117 aa7.01□□□□□ -1.29
USP39-210ENST00000459775 LELP1Q5T871 98 aa7.01□□□□□ -1.29
USP39-210ENST00000459775 TP73-AS1Q9UF72 201 aa7.01□□□□□ -1.29
USP39-210ENST00000459775 IGLV4-3A0A075B6K6 122 aa7.01□□□□□ -1.29
USP39-210ENST00000459775 IGKV3OR2-268A0A0C4DH90 116 aa7.01□□□□□ -1.29
USP39-210ENST00000459775 LST1O00453 97 aa7.01□□□□□ -1.29
USP39-210ENST00000459775 LCA10Q71F78 164 aa7.01□□□□□ -1.29
USP39-210ENST00000459775 NUPR2A6NF83 97 aa7□□□□□ -1.29
USP39-210ENST00000459775 PRSS1P07477 247 aa7□□□□□ -1.29
USP39-210ENST00000459775 Q6ZVQ6 151 aa7□□□□□ -1.29
USP39-210ENST00000459775 C5orf38Q86SI9 138 aa6.99□□□□□ -1.29
USP39-210ENST00000459775 LINC00337Q8N6G1 96 aa6.99□□□□□ -1.29
USP39-210ENST00000459775 A0A087WZ39 114 aa6.98□□□□□ -1.29
USP39-210ENST00000459775 SS18Q15532 418 aa6.98□□□□□ -1.29
USP39-210ENST00000459775 CDC42SE2Q9NRR3 84 aa6.98□□□□□ -1.29
USP39-210ENST00000459775 CCL18P55774 89 aa6.98□□□□□ -1.29
USP39-210ENST00000459775 TIMM17AQ99595 171 aa6.98□□□□□ -1.29
USP39-210ENST00000459775 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
USP39-210ENST00000459775 TMEM256-PLSCR3K7ERE1 68 aa6.97□□□□□ -1.29
USP39-210ENST00000459775 ANGP03950 147 aaKnown RBP6.97□□□□□ -1.29
USP39-210ENST00000459775 ACYP1P07311 99 aa6.97□□□□□ -1.29
USP39-210ENST00000459775 HERVK_113P61574 105 aa6.97□□□□□ -1.29
USP39-210ENST00000459775 LINC00269Q8N2A0 174 aa6.97□□□□□ -1.29
USP39-210ENST00000459775 TMEM141Q96I45 108 aa6.97□□□□□ -1.29
USP39-210ENST00000459775 KLK12Q9UKR0 248 aa6.97□□□□□ -1.29
USP39-210ENST00000459775 MP68P56378 58 aa6.97□□□□□ -1.29
USP39-210ENST00000459775 ATP5EP56381 51 aaPredicted RBP6.97□□□□□ -1.29
USP39-210ENST00000459775 IGLV10-54A0A075B6I4 117 aa6.96□□□□□ -1.3
USP39-210ENST00000459775 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
USP39-210ENST00000459775 VPS13DQ5THJ4 4388 aa6.96□□□□□ -1.3
USP39-210ENST00000459775 IGHV3OR16-9A0A0B4J2B5 98 aa6.95□□□□□ -1.3
USP39-210ENST00000459775 A0A0J9YXV3 536 aa6.95□□□□□ -1.3
USP39-210ENST00000459775 TIMM17BO60830 172 aa6.95□□□□□ -1.3
USP39-210ENST00000459775 PRR3P79522 188 aaKnown RBP6.95□□□□□ -1.3
USP39-210ENST00000459775 UBE2DNLQ8IWF7 75 aa6.95□□□□□ -1.3
USP39-210ENST00000459775 AMELXQ99217 191 aa6.95□□□□□ -1.3
USP39-210ENST00000459775 TIMM21Q9BVV7 248 aa6.95□□□□□ -1.3
USP39-210ENST00000459775 FXYD2P54710 66 aa6.95□□□□□ -1.3
USP39-210ENST00000459775 COX6A2Q02221 97 aa6.95□□□□□ -1.3
USP39-210ENST00000459775 TMEM170BQ5T4T1 132 aa6.95□□□□□ -1.3
USP39-210ENST00000459775 IGLV4-69A0A075B6H9 119 aa6.94□□□□□ -1.3
USP39-210ENST00000459775 A0A1B0GUV1 79 aa6.94□□□□□ -1.3
USP39-210ENST00000459775 H7C423 109 aa6.94□□□□□ -1.3
USP39-210ENST00000459775 INAFM2P0DMQ5 153 aa6.94□□□□□ -1.3
USP39-210ENST00000459775 PSMB2P49721 201 aa6.94□□□□□ -1.3
USP39-210ENST00000459775 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
USP39-210ENST00000459775 ENHOQ6UWT2 76 aa6.94□□□□□ -1.3
USP39-210ENST00000459775 LINC00643Q86TS7 51 aa6.94□□□□□ -1.3
USP39-210ENST00000459775 UBE2WQ96B02 151 aa6.94□□□□□ -1.3
USP39-210ENST00000459775 ALMS1Q8TCU4 4167 aa6.93□□□□□ -1.3
USP39-210ENST00000459775 LINC00313P59037 77 aa6.93□□□□□ -1.3
USP39-210ENST00000459775 REG3AQ06141 175 aa6.93□□□□□ -1.3
USP39-210ENST00000459775 NTN5Q8WTR8 489 aaPredicted RBP6.93□□□□□ -1.3
USP39-210ENST00000459775 LINC00476Q8WZB0 136 aa6.93□□□□□ -1.3
USP39-210ENST00000459775 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 K7ERJ3 54 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 COX7A2LO14548 114 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 UBE2D1P51668 147 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 NHP2Q9NX24 153 aaKnown RBP6.92□□□□□ -1.3
USP39-210ENST00000459775 LINC00959A0A1B0GUT2 108 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 M0R2N4 97 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 DNAH10OSP0CZ25 163 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 XCL1P47992 114 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 LINC01556Q5JQF7 62 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 LINC00242Q5T6M2 205 aa6.92□□□□□ -1.3
USP39-210ENST00000459775 TRAV12-1A0A0B4J245 112 aa6.91□□□□□ -1.3
USP39-210ENST00000459775 DNAH10Q8IVF4 4471 aa6.91□□□□□ -1.3
USP39-210ENST00000459775 LINC01549A6NIU2 74 aa6.91□□□□□ -1.3
USP39-210ENST00000459775 F8VRH5 84 aa6.91□□□□□ -1.3
USP39-210ENST00000459775 LY6G6CO95867 125 aa6.91□□□□□ -1.3
USP39-210ENST00000459775 MAPKAPK5-AS1Q8N8E1 139 aa6.91□□□□□ -1.3
USP39-210ENST00000459775 IGHV3-64A0A075B6Q5 118 aa6.9□□□□□ -1.3
USP39-210ENST00000459775 CCKP06307 115 aa6.9□□□□□ -1.3
USP39-210ENST00000459775 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
USP39-210ENST00000459775 PRR34Q9NV39 138 aa6.89□□□□□ -1.31
USP39-210ENST00000459775 CHCHD10Q8WYQ3 142 aaPredicted RBP6.89□□□□□ -1.31
USP39-210ENST00000459775 HERC2O95714 4834 aa6.89□□□□□ -1.31
USP39-210ENST00000459775 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
USP39-210ENST00000459775 IBA57-AS1B1ANH7 110 aa6.88□□□□□ -1.31
USP39-210ENST00000459775 ZNF22P17026 224 aaPredicted RBP6.88□□□□□ -1.31
USP39-210ENST00000459775 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
USP39-210ENST00000459775 MYMXA0A1B0GTQ4 84 aa6.88□□□□□ -1.31
USP39-210ENST00000459775 CRPP02741 224 aa6.88□□□□□ -1.31
USP39-210ENST00000459775 SDIM1Q6ZPB5 146 aa6.88□□□□□ -1.31
USP39-210ENST00000459775 TTTY13Q9BZ97 58 aa6.88□□□□□ -1.31
USP39-210ENST00000459775 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
USP39-210ENST00000459775 C6orf99Q4VX62 202 aa6.87□□□□□ -1.31
USP39-210ENST00000459775 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
USP39-210ENST00000459775 IGKV2D-24A0A075B6R9 120 aa6.86□□□□□ -1.31
USP39-210ENST00000459775 IGKV2D-26A0A0A0MRZ7 120 aa6.86□□□□□ -1.31
USP39-210ENST00000459775 PSPHP1O15172 72 aa6.86□□□□□ -1.31
USP39-210ENST00000459775 SLC25A20O43772 301 aa6.86□□□□□ -1.31
USP39-210ENST00000459775 UBE2BP63146 152 aa6.86□□□□□ -1.31
USP39-210ENST00000459775 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
USP39-210ENST00000459775 DNAH2Q9P225 4427 aa6.86□□□□□ -1.31
USP39-210ENST00000459775 PLNP26678 52 aa6.86□□□□□ -1.31
USP39-210ENST00000459775 KRTAP26-1Q6PEX3 210 aa6.86□□□□□ -1.31
USP39-210ENST00000459775 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms