RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 FXYD2P54710 66 aa3.86□□□□□ -1.79
RNU1-88P-201ENST00000459274 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
RNU1-88P-201ENST00000459274 KRTAP26-1Q6PEX3 210 aa3.86□□□□□ -1.79
RNU1-88P-201ENST00000459274 C9orf118A6NHY6 69 aa3.85□□□□□ -1.79
RNU1-88P-201ENST00000459274 H3BUT2 72 aa3.85□□□□□ -1.79
RNU1-88P-201ENST00000459274 SLC25A20O43772 301 aa3.85□□□□□ -1.79
RNU1-88P-201ENST00000459274 CNBPP62633 177 aaKnown RBP3.85□□□□□ -1.79
RNU1-88P-201ENST00000459274 C9orf116Q5BN46 136 aaPredicted RBP3.85□□□□□ -1.79
RNU1-88P-201ENST00000459274 PGPEP1Q9NXJ5 209 aa3.85□□□□□ -1.79
RNU1-88P-201ENST00000459274 C6orf48Q9UBA6 75 aa3.85□□□□□ -1.79
RNU1-88P-201ENST00000459274 TRBV20-1A0A075B6N2 111 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 IGLV5-52A0A0A0MRZ9 124 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 TRBV10-2A0A0K0K1G8 114 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 GAGE10A6NGK3 116 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 M0R378 163 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 TLX1NBP0CAT3 122 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 RPL13AP40429 203 aaKnown RBP3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 C10orf25Q5T742 122 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 Q6ZR54 194 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 LINC00336Q6ZUF6 198 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 Q8N814 137 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 LITAFQ99732 161 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 XAGE1AQ9HD64 81 aa3.84□□□□□ -1.79
RNU1-88P-201ENST00000459274 TENM3Q9P273 2699 aa3.83□□□□□ -1.8
RNU1-88P-201ENST00000459274 A0A087WTM6 91 aa3.83□□□□□ -1.8
RNU1-88P-201ENST00000459274 C16orf90A8MZG2 172 aa3.83□□□□□ -1.8
RNU1-88P-201ENST00000459274 H0YGX0 51 aa3.83□□□□□ -1.8
RNU1-88P-201ENST00000459274 DNAL4O96015 105 aa3.83□□□□□ -1.8
RNU1-88P-201ENST00000459274 SMCPP49901 116 aaPredicted RBP3.83□□□□□ -1.8
RNU1-88P-201ENST00000459274 C9orf163Q8N9P6 203 aa3.83□□□□□ -1.8
RNU1-88P-201ENST00000459274 KRTAP1-5Q9BYS1 174 aa3.83□□□□□ -1.8
RNU1-88P-201ENST00000459274 IGKV2-24A0A0C4DH68 120 aa3.82□□□□□ -1.8
RNU1-88P-201ENST00000459274 LCE6AA0A183 80 aa3.82□□□□□ -1.8
RNU1-88P-201ENST00000459274 A0A1B0GWB2 263 aa3.82□□□□□ -1.8
RNU1-88P-201ENST00000459274 K7ERJ3 54 aa3.82□□□□□ -1.8
RNU1-88P-201ENST00000459274 NCR3O14931 201 aa3.82□□□□□ -1.8
RNU1-88P-201ENST00000459274 ATXN8Q156A1 80 aa3.82□□□□□ -1.8
RNU1-88P-201ENST00000459274 SPCS1Q9Y6A9 102 aa3.82□□□□□ -1.8
RNU1-88P-201ENST00000459274 TRRAPQ9Y4A5 3859 aa3.82□□□□□ -1.8
RNU1-88P-201ENST00000459274 A0A1W2PPM0 123 aa3.81□□□□□ -1.8
RNU1-88P-201ENST00000459274 LRCOL1A6NCL2 159 aa3.81□□□□□ -1.8
RNU1-88P-201ENST00000459274 TAX1BP3O14907 124 aa3.81□□□□□ -1.8
RNU1-88P-201ENST00000459274 RTL8CO15255 209 aa3.81□□□□□ -1.8
RNU1-88P-201ENST00000459274 UBE2BP63146 152 aa3.81□□□□□ -1.8
RNU1-88P-201ENST00000459274 Q6ZRP5 223 aa3.81□□□□□ -1.8
RNU1-88P-201ENST00000459274 PLA2G2DQ9UNK4 145 aa3.81□□□□□ -1.8
RNU1-88P-201ENST00000459274 H3BQ85 93 aa3.8□□□□□ -1.8
RNU1-88P-201ENST00000459274 TSPAN13O95857 204 aa3.8□□□□□ -1.8
RNU1-88P-201ENST00000459274 FAM19A5Q7Z5A7 132 aaPredicted RBP3.8□□□□□ -1.8
RNU1-88P-201ENST00000459274 MRPL55Q7Z7F7 128 aaKnown RBP3.8□□□□□ -1.8
RNU1-88P-201ENST00000459274 DIRC1Q969H9 104 aa3.8□□□□□ -1.8
RNU1-88P-201ENST00000459274 TRAV23DV6A0A075B6W5 121 aa3.79□□□□□ -1.8
RNU1-88P-201ENST00000459274 A0A1B0GV90 55 aa3.79□□□□□ -1.8
RNU1-88P-201ENST00000459274 ETDCA0A1B0GVM5 59 aa3.79□□□□□ -1.8
RNU1-88P-201ENST00000459274 RPL28P46779 137 aaKnown RBP3.79□□□□□ -1.8
RNU1-88P-201ENST00000459274 SOSTDC1Q6X4U4 206 aa3.79□□□□□ -1.8
RNU1-88P-201ENST00000459274 Q6ZRN7 208 aaPredicted RBP3.79□□□□□ -1.8
RNU1-88P-201ENST00000459274 A0A096LNI7 61 aa3.78□□□□□ -1.8
RNU1-88P-201ENST00000459274 M0QXV9 152 aa3.78□□□□□ -1.8
RNU1-88P-201ENST00000459274 ZNF73O43830 326 aaPredicted RBP3.78□□□□□ -1.8
RNU1-88P-201ENST00000459274 PRR3P79522 188 aaKnown RBP3.78□□□□□ -1.8
RNU1-88P-201ENST00000459274 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
RNU1-88P-201ENST00000459274 LINC00337Q8N6G1 96 aa3.78□□□□□ -1.8
RNU1-88P-201ENST00000459274 SMIM11BQ8TCY0 68 aa3.78□□□□□ -1.8
RNU1-88P-201ENST00000459274 C7orf33Q8WU49 177 aa3.78□□□□□ -1.8
RNU1-88P-201ENST00000459274 NAA38Q9BRA0 125 aaKnown RBP3.78□□□□□ -1.8
RNU1-88P-201ENST00000459274 IGKV2-28A0A075B6P5 120 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 TRBV7-6A0A0J9YX20 115 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 A0A1B0GX51 115 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 F8W1H4 67 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 K7EP34 96 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 PRYO14603 147 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 TRIAP1O43715 76 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 IGKV2D-28P01615 120 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 SLPIP03973 132 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 VPREB1P12018 145 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 COX7BP24311 80 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 TNP2Q05952 138 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 UBE2V1Q13404 147 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 WFDC2Q14508 124 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 C6orf99Q4VX62 202 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 OCIAD2Q56VL3 154 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 C9orf129Q5T035 196 aaKnown RBP3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 SDIM1Q6ZPB5 146 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 C22orf24Q9Y442 160 aa3.77□□□□□ -1.81
RNU1-88P-201ENST00000459274 IGLV5-37A0A075B6J1 123 aa3.76□□□□□ -1.81
RNU1-88P-201ENST00000459274 hADV29S1A0JD25 119 aa3.76□□□□□ -1.81
RNU1-88P-201ENST00000459274 RPL37AP8A6NKH3 93 aa3.76□□□□□ -1.81
RNU1-88P-201ENST00000459274 J3QR89 54 aa3.76□□□□□ -1.81
RNU1-88P-201ENST00000459274 IGLV6-57P01721 117 aa3.76□□□□□ -1.81
RNU1-88P-201ENST00000459274 REG3GQ6UW15 175 aa3.76□□□□□ -1.81
RNU1-88P-201ENST00000459274 DHRS4-AS1Q9P1J3 65 aa3.76□□□□□ -1.81
RNU1-88P-201ENST00000459274 STAB2Q8WWQ8 2551 aa3.76□□□□□ -1.81
RNU1-88P-201ENST00000459274 IGLV1-50A0A075B6I6 118 aa3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 C9JAW5 83 aa3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 H3BMG7 143 aa3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 TMEM256-PLSCR3K7ERE1 68 aa3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 EIF4EBP3O60516 100 aaPredicted RBP3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 TRACP01848 142 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms