RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 XAGE1AQ9HD64 81 aa3.21□□□□□ -1.9
SCN3A-204ENST00000440431 C3orf84H3BNL1 204 aa3.2□□□□□ -1.9
SCN3A-204ENST00000440431 NDUFS5O43920 106 aa3.2□□□□□ -1.9
SCN3A-204ENST00000440431 ATP5EP2Q5VTU8 51 aa3.2□□□□□ -1.9
SCN3A-204ENST00000440431 NDUFC2-KCTD14E9PQ53 114 aa3.2□□□□□ -1.9
SCN3A-204ENST00000440431 XGP55808 180 aa3.2□□□□□ -1.9
SCN3A-204ENST00000440431 KIF25-AS1Q9Y6Z4 181 aa3.2□□□□□ -1.9
SCN3A-204ENST00000440431 KRTAP10-3P60369 221 aa3.2□□□□□ -1.9
SCN3A-204ENST00000440431 PKD1L1Q8TDX9 2849 aa3.2□□□□□ -1.9
SCN3A-204ENST00000440431 PLAC8L1A1L4L8 177 aa3.19□□□□□ -1.9
SCN3A-204ENST00000440431 C6orf99Q4VX62 202 aa3.19□□□□□ -1.9
SCN3A-204ENST00000440431 TTTY13Q9BZ97 58 aa3.19□□□□□ -1.9
SCN3A-204ENST00000440431 X6R8D5 127 aa3.19□□□□□ -1.9
SCN3A-204ENST00000440431 SMIM1B2RUZ4 78 aa3.19□□□□□ -1.9
SCN3A-204ENST00000440431 PRYO14603 147 aa3.19□□□□□ -1.9
SCN3A-204ENST00000440431 Q6JHZ5 121 aa3.19□□□□□ -1.9
SCN3A-204ENST00000440431 ZNF73O43830 326 aaPredicted RBP3.19□□□□□ -1.9
SCN3A-204ENST00000440431 C6orf223Q8N319 242 aa3.19□□□□□ -1.9
SCN3A-204ENST00000440431 PRO0461Q9UI25 63 aa3.19□□□□□ -1.9
SCN3A-204ENST00000440431 BPY2O14599 106 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 M0QXV9 152 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 PRM2P04554 102 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 FOXI1Q12951 378 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 UNQ6190/PRO20217Q6UXQ8 127 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 LINC00643Q86TS7 51 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 UPK3BQ9BT76 320 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 IGLV4-60A0A075B6I1 120 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 ATOX1O00244 68 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 SBSPONQ8IVN8 264 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 MDFIQ99750 246 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 C19orf73Q9NVV2 129 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 DNAH1Q9P2D7 4330 aa3.18□□□□□ -1.9
SCN3A-204ENST00000440431 CCDC179H3BU77 68 aa3.17□□□□□ -1.9
SCN3A-204ENST00000440431 Q8NAQ8 132 aa3.17□□□□□ -1.9
SCN3A-204ENST00000440431 LYSTQ99698 3801 aa3.17□□□□□ -1.9
SCN3A-204ENST00000440431 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
SCN3A-204ENST00000440431 PPDPFQ9H3Y8 114 aa3.17□□□□□ -1.9
SCN3A-204ENST00000440431 MUC4Q99102 2169 aa3.17□□□□□ -1.9
SCN3A-204ENST00000440431 H0Y9J4 135 aa3.17□□□□□ -1.9
SCN3A-204ENST00000440431 REG3GQ6UW15 175 aa3.17□□□□□ -1.9
SCN3A-204ENST00000440431 CLEC2BQ92478 149 aa3.17□□□□□ -1.9
SCN3A-204ENST00000440431 LRCOL1A6NCL2 159 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 LINC01546A6NGU7 62 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 ESRGQ1W209 222 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 MAPKAPK5-AS1Q8N8E1 139 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 CSMD3Q7Z407 3707 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 NBDYA0A0U1RRE5 68 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 C5orf47Q569G3 176 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 CELA1Q9UNI1 258 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 TEX49A0A1B0GTD5 131 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 RPL37AP8A6NKH3 93 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 LST1O00453 97 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 LINC00694P0DN24 101 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
SCN3A-204ENST00000440431 Q6ZQY7 126 aa3.16□□□□□ -1.9
SCN3A-204ENST00000440431 LINC00315P59091 139 aa3.15□□□□□ -1.9
SCN3A-204ENST00000440431 C10orf25Q5T742 122 aa3.15□□□□□ -1.9
SCN3A-204ENST00000440431 HUWE1Q7Z6Z7 4374 aaKnown RBP3.15□□□□□ -1.91
SCN3A-204ENST00000440431 IGKV2-28A0A075B6P5 120 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 IGHV3OR16-9A0A0B4J2B5 98 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 IGKV2D-28P01615 120 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 DNAH10OSP0CZ25 163 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 SMCPP49901 116 aaPredicted RBP3.15□□□□□ -1.91
SCN3A-204ENST00000440431 Q6ZSN1 163 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 MRPL55Q7Z7F7 128 aaKnown RBP3.15□□□□□ -1.91
SCN3A-204ENST00000440431 IGLV5-39A0A0G2JS06 123 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 TRIAP1O43715 76 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 GAS8-AS1O95177 125 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 CCKP06307 115 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 SMIM11BQ8TCY0 68 aa3.15□□□□□ -1.91
SCN3A-204ENST00000440431 DNHD1Q96M86 4753 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 LINC00526Q96FQ7 95 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 KRTAP3-3Q9BYR6 98 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 KRTAP3-2Q9BYR7 98 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 FAM229AH3BQW9 127 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 J3KT08 172 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 K7EIL1 84 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 COX6A2Q02221 97 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 LIMD2Q9BT23 127 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 DNAH7Q8WXX0 4024 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 IGLV5-45A0A087WSX0 123 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 A0A096LNJ9 63 aa3.14□□□□□ -1.91
SCN3A-204ENST00000440431 TRBV7-6A0A0J9YX20 115 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 A0A1B0GW54 56 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 TMEM258P61165 79 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 TM2D3Q9BRN9 247 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 DYNC2H1Q8NCM8 4307 aaKnown RBP3.13□□□□□ -1.91
SCN3A-204ENST00000440431 TRBV10-3A0A0K0K1G6 114 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 CHKB-CPT1BH3BT56 60 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 WIPF1O43516 503 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 C14orf132Q9NPU4 83 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 C9orf116Q5BN46 136 aaPredicted RBP3.13□□□□□ -1.91
SCN3A-204ENST00000440431 Q6ZRU5 148 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 LINC00336Q6ZUF6 198 aa3.13□□□□□ -1.91
SCN3A-204ENST00000440431 C1orf137Q5JT78 98 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 NTM-AS1Q6ZSK4 140 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 LINC00612Q8N6U2 182 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 CSNK1G2-AS1Q8NCQ2 148 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 IMUPQ9GZP8 106 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 COL7A1Q02388 2944 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms