RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PCNTO95613 3336 aa1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 PCDH15Q96QU1 1955 aa1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 ANKRD11Q6UB99 2663 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P12-201ENST00000438594 IGKV4-1P06312 121 aa1.85□□□□□ -2.11
HMGB1P12-201ENST00000438594 Q6ZRN7 208 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P12-201ENST00000438594 COA5Q86WW8 74 aa1.85□□□□□ -2.11
HMGB1P12-201ENST00000438594 LINC00472Q9H8W2 130 aa1.85□□□□□ -2.11
HMGB1P12-201ENST00000438594 MDC1Q14676 2089 aaKnown RBP1.84□□□□□ -2.11
HMGB1P12-201ENST00000438594 GPR179Q6PRD1 2367 aa1.84□□□□□ -2.11
HMGB1P12-201ENST00000438594 DOCK10Q96BY6 2186 aa1.84□□□□□ -2.11
HMGB1P12-201ENST00000438594 TRGV2A0A075B6R0 118 aa1.84□□□□□ -2.11
HMGB1P12-201ENST00000438594 TRGV1A0A0A0MS02 117 aa1.84□□□□□ -2.11
HMGB1P12-201ENST00000438594 H0Y9P7 68 aa1.84□□□□□ -2.11
HMGB1P12-201ENST00000438594 J3QRE1 110 aa1.84□□□□□ -2.11
HMGB1P12-201ENST00000438594 TXNDC17Q9BRA2 123 aa1.84□□□□□ -2.11
HMGB1P12-201ENST00000438594 SHROOM3Q8TF72 1996 aa1.84□□□□□ -2.11
HMGB1P12-201ENST00000438594 ANKRD17O75179 2603 aaKnown RBP1.84□□□□□ -2.12
HMGB1P12-201ENST00000438594 SDK1Q7Z5N4 2213 aa1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 UBR4Q5T4S7 5183 aa1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 FLNBO75369 2602 aaKnown RBP1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 TRAV1-2A0A0B4J238 106 aa1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 TRAV21A0A0B4J279 112 aa1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 PRB2P02812 416 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 TMEM263Q8WUH6 116 aaKnown RBP1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 CHD6Q8TD26 2715 aa1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 A0A0C4DFX4 3053 aa1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 DNAJC13O75165 2243 aa1.83□□□□□ -2.12
HMGB1P12-201ENST00000438594 ANKRD36A6QL64 1941 aa1.82□□□□□ -2.12
HMGB1P12-201ENST00000438594 IGKV2-24A0A0C4DH68 120 aa1.82□□□□□ -2.12
HMGB1P12-201ENST00000438594 LCE6AA0A183 80 aa1.82□□□□□ -2.12
HMGB1P12-201ENST00000438594 COX17Q14061 63 aa1.82□□□□□ -2.12
HMGB1P12-201ENST00000438594 NREPQ16612 68 aa1.82□□□□□ -2.12
HMGB1P12-201ENST00000438594 NCBP2-AS2Q69YL0 99 aa1.82□□□□□ -2.12
HMGB1P12-201ENST00000438594 ALPK2Q86TB3 2170 aa1.82□□□□□ -2.12
HMGB1P12-201ENST00000438594 COL5A1P20908 1838 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P12-201ENST00000438594 FBN3Q75N90 2809 aa1.81□□□□□ -2.12
HMGB1P12-201ENST00000438594 TRBV30A0A0K0K1B3 111 aa1.81□□□□□ -2.12
HMGB1P12-201ENST00000438594 C10orf113Q5VZT2 155 aa1.81□□□□□ -2.12
HMGB1P12-201ENST00000438594 SMIM4Q8WVI0 70 aa1.81□□□□□ -2.12
HMGB1P12-201ENST00000438594 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
HMGB1P12-201ENST00000438594 MYO7AQ13402 2215 aa1.81□□□□□ -2.12
HMGB1P12-201ENST00000438594 ACYP2P14621 99 aa1.8□□□□□ -2.12
HMGB1P12-201ENST00000438594 IGFL1Q6UW32 110 aa1.8□□□□□ -2.12
HMGB1P12-201ENST00000438594 ZCCHC13Q8WW36 166 aaKnown RBP1.8□□□□□ -2.12
HMGB1P12-201ENST00000438594 FREM1Q5H8C1 2179 aa1.8□□□□□ -2.12
HMGB1P12-201ENST00000438594 RTTNQ86VV8 2226 aa1.8□□□□□ -2.12
HMGB1P12-201ENST00000438594 FN1P02751 2386 aaKnown RBP1.8□□□□□ -2.12
HMGB1P12-201ENST00000438594 MYO18BQ8IUG5 2567 aa1.8□□□□□ -2.12
HMGB1P12-201ENST00000438594 EPG5Q9HCE0 2579 aa1.79□□□□□ -2.12
HMGB1P12-201ENST00000438594 NDUFB1O75438 58 aa1.79□□□□□ -2.12
HMGB1P12-201ENST00000438594 CAV3P56539 151 aa1.79□□□□□ -2.12
HMGB1P12-201ENST00000438594 CCL19Q99731 98 aa1.79□□□□□ -2.12
HMGB1P12-201ENST00000438594 BDP1A6H8Y1 2624 aa1.79□□□□□ -2.12
HMGB1P12-201ENST00000438594 CDH23Q9H251 3354 aa1.79□□□□□ -2.12
HMGB1P12-201ENST00000438594 BPTFQ12830 3046 aa1.78□□□□□ -2.12
HMGB1P12-201ENST00000438594 INTS1Q8N201 2190 aaKnown RBP1.78□□□□□ -2.12
HMGB1P12-201ENST00000438594 LINC00959A0A1B0GUT2 108 aa1.78□□□□□ -2.12
HMGB1P12-201ENST00000438594 TOMM5Q8N4H5 51 aa1.78□□□□□ -2.12
HMGB1P12-201ENST00000438594 Q9Y3F1 56 aa1.78□□□□□ -2.12
HMGB1P12-201ENST00000438594 CENPFP49454 3210 aa1.78□□□□□ -2.12
HMGB1P12-201ENST00000438594 ITPR3Q14573 2671 aa1.77□□□□□ -2.13
HMGB1P12-201ENST00000438594 JMJD1CQ15652 2540 aa1.77□□□□□ -2.13
HMGB1P12-201ENST00000438594 PIEZO1Q92508 2521 aa1.77□□□□□ -2.13
HMGB1P12-201ENST00000438594 TRBV6-1A0A0K0K1D8 114 aa1.77□□□□□ -2.13
HMGB1P12-201ENST00000438594 ENHOQ6UWT2 76 aa1.77□□□□□ -2.13
HMGB1P12-201ENST00000438594 Q6ZQY7 126 aa1.77□□□□□ -2.13
HMGB1P12-201ENST00000438594 WFDC9Q8NEX5 89 aa1.77□□□□□ -2.13
HMGB1P12-201ENST00000438594 SPTBN5Q9NRC6 3674 aaKnown RBP1.77□□□□□ -2.13
HMGB1P12-201ENST00000438594 HECTD1Q9ULT8 2610 aa1.77□□□□□ -2.13
HMGB1P12-201ENST00000438594 LAMA3Q16787 3333 aa1.76□□□□□ -2.13
HMGB1P12-201ENST00000438594 DOPEY1Q5JWR5 2465 aa1.76□□□□□ -2.13
HMGB1P12-201ENST00000438594 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
HMGB1P12-201ENST00000438594 FCER1GP30273 86 aa1.76□□□□□ -2.13
HMGB1P12-201ENST00000438594 OBSCN-AS1Q96MR7 158 aa1.76□□□□□ -2.13
HMGB1P12-201ENST00000438594 GAFA1Q96PS6 74 aa1.76□□□□□ -2.13
HMGB1P12-201ENST00000438594 SPTBN4Q9H254 2564 aa1.75□□□□□ -2.13
HMGB1P12-201ENST00000438594 ZFHX3Q15911 3703 aa1.75□□□□□ -2.13
HMGB1P12-201ENST00000438594 K7EMI3 77 aa1.75□□□□□ -2.13
HMGB1P12-201ENST00000438594 DEFB112Q30KQ8 113 aa1.75□□□□□ -2.13
HMGB1P12-201ENST00000438594 NCOA6Q14686 2063 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P12-201ENST00000438594 G3V318 75 aa1.74□□□□□ -2.13
HMGB1P12-201ENST00000438594 PRH1P02810 166 aa1.74□□□□□ -2.13
HMGB1P12-201ENST00000438594 NMES1Q9C002 83 aa1.74□□□□□ -2.13
HMGB1P12-201ENST00000438594 CMC2Q9NRP2 79 aa1.74□□□□□ -2.13
HMGB1P12-201ENST00000438594 TNRC18O15417 2968 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P12-201ENST00000438594 ABCA12Q86UK0 2595 aa1.73□□□□□ -2.13
HMGB1P12-201ENST00000438594 STAB1Q9NY15 2570 aa1.73□□□□□ -2.13
HMGB1P12-201ENST00000438594 MED13LQ71F56 2210 aa1.73□□□□□ -2.13
HMGB1P12-201ENST00000438594 GVQW2A0A096LPI5 108 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P12-201ENST00000438594 A0A1B0GU69 56 aa1.73□□□□□ -2.13
HMGB1P12-201ENST00000438594 C10orf99Q6UWK7 81 aa1.73□□□□□ -2.13
HMGB1P12-201ENST00000438594 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.73□□□□□ -2.13
HMGB1P12-201ENST00000438594 FASNP49327 2511 aaKnown RBP1.73□□□□□ -2.13
HMGB1P12-201ENST00000438594 NCOR2Q9Y618 2525 aa1.73□□□□□ -2.13
HMGB1P12-201ENST00000438594 A0A096LNT2 108 aa1.72□□□□□ -2.13
HMGB1P12-201ENST00000438594 Q6ZRX8 168 aa1.72□□□□□ -2.13
HMGB1P12-201ENST00000438594 DEFB106AQ8N104 65 aa1.72□□□□□ -2.13
HMGB1P12-201ENST00000438594 PLAC4Q8WY50 150 aa1.72□□□□□ -2.13
HMGB1P12-201ENST00000438594 USP34Q70CQ2 3546 aa1.72□□□□□ -2.13
HMGB1P12-201ENST00000438594 MKI67P46013 3256 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms