RNA–Protein interactions for RNA: ENST00000437167.1

RGPD6-203, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-203ENST00000437167 CCDC18Q5T9S5 1454 aa0.41□□□□□ -2.34
RGPD6-203ENST00000437167 RGPD3A6NKT7 1758 aaPredicted RBP0.4□□□□□ -2.35
RGPD6-203ENST00000437167 KANTRA0A1W2PQU2 76 aa0.4□□□□□ -2.35
RGPD6-203ENST00000437167 CEBPZOSA8MTT3 80 aa0.4□□□□□ -2.35
RGPD6-203ENST00000437167 APLNQ9ULZ1 77 aa0.4□□□□□ -2.35
RGPD6-203ENST00000437167 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
RGPD6-203ENST00000437167 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
RGPD6-203ENST00000437167 SCRIBQ14160 1630 aa0.39□□□□□ -2.35
RGPD6-203ENST00000437167 ALKQ9UM73 1620 aa0.39□□□□□ -2.35
RGPD6-203ENST00000437167 MYH4Q9Y623 1939 aa0.39□□□□□ -2.35
RGPD6-203ENST00000437167 SPINK4O60575 86 aa0.39□□□□□ -2.35
RGPD6-203ENST00000437167 MAGI2Q86UL8 1455 aa0.38□□□□□ -2.35
RGPD6-203ENST00000437167 KLK9Q2XQG4 91 aa0.38□□□□□ -2.35
RGPD6-203ENST00000437167 S100A13Q99584 98 aa0.38□□□□□ -2.35
RGPD6-203ENST00000437167 FMN2Q9NZ56 1722 aa0.38□□□□□ -2.35
RGPD6-203ENST00000437167 PTPRZ1P23471 2315 aaPredicted RBP0.37□□□□□ -2.35
RGPD6-203ENST00000437167 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
RGPD6-203ENST00000437167 COX7BP24311 80 aa0.37□□□□□ -2.35
RGPD6-203ENST00000437167 GAFA1Q96PS6 74 aa0.37□□□□□ -2.35
RGPD6-203ENST00000437167 MRPL34Q9BQ48 92 aaKnown RBP0.37□□□□□ -2.35
RGPD6-203ENST00000437167 ST20Q9HBF5 79 aa0.37□□□□□ -2.35
RGPD6-203ENST00000437167 MAP3K4Q9Y6R4 1608 aa0.37□□□□□ -2.35
RGPD6-203ENST00000437167 AKAP6Q13023 2319 aa0.37□□□□□ -2.35
RGPD6-203ENST00000437167 UNC79Q9P2D8 2635 aa0.36□□□□□ -2.35
RGPD6-203ENST00000437167 TSC2P49815 1807 aa0.36□□□□□ -2.35
RGPD6-203ENST00000437167 PTPRQQ9UMZ3 2332 aa0.36□□□□□ -2.35
RGPD6-203ENST00000437167 IGF2RP11717 2491 aa0.36□□□□□ -2.35
RGPD6-203ENST00000437167 ADIRFQ15847 76 aa0.36□□□□□ -2.35
RGPD6-203ENST00000437167 LRRC7Q96NW7 1537 aa0.36□□□□□ -2.35
RGPD6-203ENST00000437167 PPLO60437 1756 aa0.35□□□□□ -2.35
RGPD6-203ENST00000437167 LRRC9Q6ZRR7 1453 aa0.35□□□□□ -2.35
RGPD6-203ENST00000437167 HUWE1Q7Z6Z7 4374 aaKnown RBP0.34□□□□□ -2.35
RGPD6-203ENST00000437167 TRAV21A0A0B4J279 112 aa0.34□□□□□ -2.36
RGPD6-203ENST00000437167 TENM4Q6N022 2769 aa0.34□□□□□ -2.36
RGPD6-203ENST00000437167 TMEM131LA2VDJ0 1609 aa0.34□□□□□ -2.36
RGPD6-203ENST00000437167 PKDREJQ9NTG1 2253 aa0.34□□□□□ -2.36
RGPD6-203ENST00000437167 DOPEY2Q9Y3R5 2298 aa0.33□□□□□ -2.36
RGPD6-203ENST00000437167 CCL22O00626 93 aa0.33□□□□□ -2.36
RGPD6-203ENST00000437167 H1FX-AS1Q4G0G2 97 aa0.33□□□□□ -2.36
RGPD6-203ENST00000437167 CLIP1P30622 1438 aa0.32□□□□□ -2.36
RGPD6-203ENST00000437167 SPTBN1Q01082 2364 aaKnown RBP0.32□□□□□ -2.36
RGPD6-203ENST00000437167 ARHGAP35Q9NRY4 1499 aa0.32□□□□□ -2.36
RGPD6-203ENST00000437167 PKD1L3Q7Z443 1732 aa0.32□□□□□ -2.36
RGPD6-203ENST00000437167 ANKRD36A6QL64 1941 aa0.31□□□□□ -2.36
RGPD6-203ENST00000437167 WFDC9Q8NEX5 89 aa0.31□□□□□ -2.36
RGPD6-203ENST00000437167 URB1O60287 2271 aaKnown RBP0.3□□□□□ -2.36
RGPD6-203ENST00000437167 ERVK-7P63135 1459 aa0.3□□□□□ -2.36
RGPD6-203ENST00000437167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.3□□□□□ -2.36
RGPD6-203ENST00000437167 MACF1Q9UPN3 7388 aaKnown RBP0.3□□□□□ -2.36
RGPD6-203ENST00000437167 NCOR2Q9Y618 2525 aa0.3□□□□□ -2.36
RGPD6-203ENST00000437167 FAT2Q9NYQ8 4349 aa0.3□□□□□ -2.36
RGPD6-203ENST00000437167 RGPD1P0DJD0 1748 aa0.3□□□□□ -2.36
RGPD6-203ENST00000437167 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
RGPD6-203ENST00000437167 NDUFB1O75438 58 aa0.29□□□□□ -2.36
RGPD6-203ENST00000437167 PRM1P04553 51 aa0.29□□□□□ -2.36
RGPD6-203ENST00000437167 RPL38P63173 70 aaKnown RBP0.29□□□□□ -2.36
RGPD6-203ENST00000437167 VWFP04275 2813 aa0.29□□□□□ -2.36
RGPD6-203ENST00000437167 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
RGPD6-203ENST00000437167 RGPD2P0DJD1 1756 aa0.28□□□□□ -2.36
RGPD6-203ENST00000437167 HEPN1Q6WQI6 88 aa0.28□□□□□ -2.36
RGPD6-203ENST00000437167 KMT2DO14686 5537 aa0.28□□□□□ -2.36
RGPD6-203ENST00000437167 CELSR1Q9NYQ6 3014 aa0.28□□□□□ -2.36
RGPD6-203ENST00000437167 URB2Q14146 1524 aaKnown RBP0.28□□□□□ -2.37
RGPD6-203ENST00000437167 USP32Q8NFA0 1604 aa0.27□□□□□ -2.37
RGPD6-203ENST00000437167 GVINP1Q7Z2Y8 2422 aa0.27□□□□□ -2.37
RGPD6-203ENST00000437167 KIF20BQ96Q89 1820 aa0.27□□□□□ -2.37
RGPD6-203ENST00000437167 H3BUT2 72 aa0.27□□□□□ -2.37
RGPD6-203ENST00000437167 LELP1Q5T871 98 aa0.27□□□□□ -2.37
RGPD6-203ENST00000437167 HIVEP3Q5T1R4 2406 aa0.27□□□□□ -2.37
RGPD6-203ENST00000437167 DCAF1Q9Y4B6 1507 aa0.27□□□□□ -2.37
RGPD6-203ENST00000437167 DIP2BQ9P265 1576 aa0.27□□□□□ -2.37
RGPD6-203ENST00000437167 LPAP08519 4548 aa0.26□□□□□ -2.37
RGPD6-203ENST00000437167 CHD6Q8TD26 2715 aa0.26□□□□□ -2.37
RGPD6-203ENST00000437167 LOC730098B7Z3J9 87 aa0.26□□□□□ -2.37
RGPD6-203ENST00000437167 BVES-AS1Q5T3Y7 98 aa0.26□□□□□ -2.37
RGPD6-203ENST00000437167 NCOA2Q15596 1464 aa0.26□□□□□ -2.37
RGPD6-203ENST00000437167 MYCBP2O75592 4640 aa0.26□□□□□ -2.37
RGPD6-203ENST00000437167 SUPT6HQ7KZ85 1726 aaKnown RBP0.26□□□□□ -2.37
RGPD6-203ENST00000437167 TNXBP22105 4242 aa0.26□□□□□ -2.37
RGPD6-203ENST00000437167 QSER1Q2KHR3 1735 aa0.25□□□□□ -2.37
RGPD6-203ENST00000437167 CDKN2A-AS1Q9UH64 79 aa0.25□□□□□ -2.37
RGPD6-203ENST00000437167 MAST4O15021 2626 aa0.25□□□□□ -2.37
RGPD6-203ENST00000437167 KMT2AQ03164 3969 aa0.24□□□□□ -2.37
RGPD6-203ENST00000437167 DEFB121Q5J5C9 76 aa0.24□□□□□ -2.37
RGPD6-203ENST00000437167 ATP5EP2Q5VTU8 51 aa0.23□□□□□ -2.37
RGPD6-203ENST00000437167 CEP170BQ9Y4F5 1589 aaPredicted RBP0.23□□□□□ -2.37
RGPD6-203ENST00000437167 BSNQ9UPA5 3926 aa0.22□□□□□ -2.37
RGPD6-203ENST00000437167 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
RGPD6-203ENST00000437167 WNK2Q9Y3S1 2297 aa0.22□□□□□ -2.37
RGPD6-203ENST00000437167 UBR3Q6ZT12 1888 aa0.22□□□□□ -2.37
RGPD6-203ENST00000437167 COL14A1Q05707 1796 aaKnown RBP0.22□□□□□ -2.37
RGPD6-203ENST00000437167 KDM5DQ9BY66 1539 aa0.21□□□□□ -2.38
RGPD6-203ENST00000437167 CACNA1AO00555 2505 aa0.21□□□□□ -2.38
RGPD6-203ENST00000437167 PTPN13Q12923 2485 aa0.21□□□□□ -2.38
RGPD6-203ENST00000437167 UBR5O95071 2799 aaPredicted RBP0.2□□□□□ -2.38
RGPD6-203ENST00000437167 PRKDCP78527 4128 aaKnown RBP0.2□□□□□ -2.38
RGPD6-203ENST00000437167 UMAD1C9J7I0 102 aa0.2□□□□□ -2.38
RGPD6-203ENST00000437167 IFI6P09912 130 aa0.2□□□□□ -2.38
RGPD6-203ENST00000437167 SPRR2DP22532 72 aa0.2□□□□□ -2.38
RGPD6-203ENST00000437167 COX6B2Q6YFQ2 88 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms