RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 S100A4P26447 101 aaKnown RBP2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 UBE2D3P61077 147 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 UBE2D2P62837 147 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 CIRBPQ14011 172 aaKnown RBP2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 S100A7L2Q5SY68 101 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 ZFP2Q6ZN57 461 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 TMEM75Q8N9X5 138 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 UPK3BQ9BT76 320 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 OSTCQ9NRP0 149 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 MYCBP2O75592 4640 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 A0A0B4J2C4 111 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 M0R378 163 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 DEFA4P12838 97 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 FUSP35637 526 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 MP68P56378 58 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 HIST1H4AP62805 103 aaKnown RBP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 SUPT4H1P63272 117 aaKnown RBP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 SS18Q15532 418 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 UNQ9165/PRO28630Q6UXU0 137 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 C6orf223Q8N319 242 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 Q8NAQ8 132 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 LINC01600Q96MT4 127 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 SLC25A22Q9H936 323 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 TAS2R4Q9NYW5 299 aa2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 TIMM8BQ9Y5J9 83 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P5-201ENST00000428894 FAT1Q14517 4588 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRBV25-1A0A075B6N4 114 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRBV10-2A0A0K0K1G8 114 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 LOC389332A0A1B0GUA5 103 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 LINC01549A6NIU2 74 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 LST1O00453 97 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 PEX7O00628 323 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 COX7A2LO14548 114 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 SPART-AS1P0CW21 52 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 UBE2AP49459 152 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 KLK9Q2XQG4 91 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 C2orf82Q6UX34 121 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 FP248Q71RG6 208 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 FAM19A3Q7Z5A8 133 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 Q8N8P6 123 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 NKAPP1Q8N9T2 125 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 SLC50A1Q9BRV3 221 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 TMEM14BQ9NUH8 114 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 ZNF492Q9P255 531 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 KLK9Q9UKQ9 250 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 V9GYV3 84 aa2.83□□□□□ -1.96
HMGB3P5-201ENST00000428894 VPS13BQ7Z7G8 4022 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRBV6-6A0A0A6YYG2 114 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRAV3A0A0B4J244 114 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 SMIM27A0A1W2PRY6 76 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 A8MUN3 132 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 NDUFA4O00483 81 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 SPINK4O60575 86 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 RPL27AP46776 148 aaKnown RBP2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 Q5VSD8 79 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 C7orf65Q6ZTY9 151 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 LINC00173Q6ZV60 143 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 LYPD1Q8N2G4 141 aa2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 FLG2Q5D862 2391 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGLV11-55A0A075B6I3 123 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 NBDYA0A0U1RRE5 68 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 C19orf71A6NCJ1 209 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 CCKP06307 115 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 SAA1P0DJI8 122 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 IFI27P40305 119 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 CCL18P55774 89 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 DEFB131AP59861 70 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 SLC25A29Q8N8R3 303 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 RHPN1-AS1Q9BWJ2 59 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 NPCDR1Q9BY65 106 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 S4R3C0 116 aa2.81□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGKV3-7A0A075B6H7 116 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGKV2D-24A0A075B6R9 120 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 IGHV7-4-1A0A0J9YVY3 117 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 TEX49A0A1B0GTD5 131 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 BCE1O60756 84 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 COX6CP09669 75 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 ZNF80P51504 273 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 RHOHQ15669 191 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 C1orf100Q5SVJ3 147 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 Q6JHZ5 121 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 TMEM167AQ8TBQ9 72 aa2.8□□□□□ -1.96
HMGB3P5-201ENST00000428894 E7EUB6 86 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 COX7A2P2O60397 106 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 LTAP01374 205 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 XCL1P47992 114 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 UBE2D1P51668 147 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 ESRGQ1W209 222 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 C6orf99Q4VX62 202 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 C10orf55Q5SWW7 151 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 SDIM1Q6ZPB5 146 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 ZNF818PQ6ZRF7 136 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 LYZL2Q7Z4W2 148 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 C20orf197Q8N268 126 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 CYSTM1Q9H1C7 97 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 C11orf1Q9H5F2 150 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 XCL2Q9UBD3 114 aa2.79□□□□□ -1.96
HMGB3P5-201ENST00000428894 PRO1854Q9UHT4 67 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms