RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 CNBPP62633 177 aaKnown RBP5.72□□□□□ -1.49
SMC6-204ENST00000428868 RPL18AQ02543 176 aaKnown RBP5.72□□□□□ -1.49
SMC6-204ENST00000428868 COX17Q14061 63 aa5.72□□□□□ -1.49
SMC6-204ENST00000428868 GAGE2EQ4V326 116 aa5.72□□□□□ -1.49
SMC6-204ENST00000428868 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
SMC6-204ENST00000428868 GAGE2DQ9UEU5 116 aa5.72□□□□□ -1.49
SMC6-204ENST00000428868 PCLOQ9Y6V0 5065 aa5.71□□□□□ -1.49
SMC6-204ENST00000428868 IGKV2-28A0A075B6P5 120 aa5.71□□□□□ -1.5
SMC6-204ENST00000428868 A0A1B0GWB2 263 aa5.71□□□□□ -1.5
SMC6-204ENST00000428868 TAX1BP3O14907 124 aa5.71□□□□□ -1.5
SMC6-204ENST00000428868 IGKV2D-28P01615 120 aa5.71□□□□□ -1.5
SMC6-204ENST00000428868 PRR3P79522 188 aaKnown RBP5.71□□□□□ -1.5
SMC6-204ENST00000428868 RNF151Q2KHN1 245 aa5.71□□□□□ -1.5
SMC6-204ENST00000428868 C14orf177Q52M58 125 aa5.71□□□□□ -1.5
SMC6-204ENST00000428868 RAB37Q96AX2 223 aa5.71□□□□□ -1.5
SMC6-204ENST00000428868 NAA38Q9BRA0 125 aaKnown RBP5.71□□□□□ -1.5
SMC6-204ENST00000428868 A0A096LNI7 61 aa5.7□□□□□ -1.5
SMC6-204ENST00000428868 LOC107984156A0A0G2JMH3 177 aa5.7□□□□□ -1.5
SMC6-204ENST00000428868 TLX1NBP0CAT3 122 aa5.7□□□□□ -1.5
SMC6-204ENST00000428868 RPL24P83731 157 aaKnown RBP5.7□□□□□ -1.5
SMC6-204ENST00000428868 ARL17AQ8IVW1 177 aa5.7□□□□□ -1.5
SMC6-204ENST00000428868 HERC2O95714 4834 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 FAM168BA1KXE4 195 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 A6NDN8 102 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 PANO1I0J062 215 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 NCR3O14931 201 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 CHTF8P0CG12 524 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 KRTAP10-2P60368 255 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 GAGE2BQ13066 116 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 KRTAP7-1Q8IUC3 87 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 LINC00337Q8N6G1 96 aa5.69□□□□□ -1.5
SMC6-204ENST00000428868 DYNC1H1Q14204 4646 aaKnown RBP5.68□□□□□ -1.5
SMC6-204ENST00000428868 A0A0B4J2C4 111 aa5.68□□□□□ -1.5
SMC6-204ENST00000428868 IGKV2-24A0A0C4DH68 120 aa5.68□□□□□ -1.5
SMC6-204ENST00000428868 LOC107984640A0A0U1RRK4 108 aa5.68□□□□□ -1.5
SMC6-204ENST00000428868 TMEM238LA0A1B0GVL6 79 aa5.68□□□□□ -1.5
SMC6-204ENST00000428868 A6NJY4 79 aa5.68□□□□□ -1.5
SMC6-204ENST00000428868 COL5A1-AS1Q5SY13 56 aa5.68□□□□□ -1.5
SMC6-204ENST00000428868 SERTAD4-AS1Q5TG53 156 aa5.68□□□□□ -1.5
SMC6-204ENST00000428868 C9orf163Q8N9P6 203 aa5.68□□□□□ -1.5
SMC6-204ENST00000428868 PPDPFQ9H3Y8 114 aa5.68□□□□□ -1.5
SMC6-204ENST00000428868 PKHD1P08F94 4074 aa5.67□□□□□ -1.5
SMC6-204ENST00000428868 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.67□□□□□ -1.5
SMC6-204ENST00000428868 H7C2G1 150 aa5.67□□□□□ -1.5
SMC6-204ENST00000428868 TSPAN13O95857 204 aa5.67□□□□□ -1.5
SMC6-204ENST00000428868 VPREB1P12018 145 aa5.67□□□□□ -1.5
SMC6-204ENST00000428868 RPL13AP40429 203 aaKnown RBP5.67□□□□□ -1.5
SMC6-204ENST00000428868 SDIM1Q6ZPB5 146 aa5.66□□□□□ -1.5
SMC6-204ENST00000428868 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
SMC6-204ENST00000428868 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
SMC6-204ENST00000428868 PGPEP1Q9NXJ5 209 aa5.66□□□□□ -1.5
SMC6-204ENST00000428868 RYR1P21817 5038 aa5.66□□□□□ -1.5
SMC6-204ENST00000428868 LRP1BQ9NZR2 4599 aa5.65□□□□□ -1.5
SMC6-204ENST00000428868 IGLV5-52A0A0A0MRZ9 124 aa5.65□□□□□ -1.5
SMC6-204ENST00000428868 A0A1B0GV90 55 aa5.65□□□□□ -1.5
SMC6-204ENST00000428868 H3BUT2 72 aa5.65□□□□□ -1.5
SMC6-204ENST00000428868 NDUFC2O95298 119 aa5.65□□□□□ -1.5
SMC6-204ENST00000428868 FAM19A5Q7Z5A7 132 aaPredicted RBP5.65□□□□□ -1.5
SMC6-204ENST00000428868 COPS9Q8WXC6 57 aa5.65□□□□□ -1.5
SMC6-204ENST00000428868 PRO1854Q9UHT4 67 aa5.65□□□□□ -1.5
SMC6-204ENST00000428868 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.65□□□□□ -1.5
SMC6-204ENST00000428868 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
SMC6-204ENST00000428868 C9orf118A6NHY6 69 aa5.64□□□□□ -1.51
SMC6-204ENST00000428868 C16orf90A8MZG2 172 aa5.64□□□□□ -1.51
SMC6-204ENST00000428868 LBHQ53QV2 105 aaPredicted RBP5.63□□□□□ -1.51
SMC6-204ENST00000428868 OR13C6PQ8NH95 151 aa5.63□□□□□ -1.51
SMC6-204ENST00000428868 PLA2G2DQ9UNK4 145 aa5.63□□□□□ -1.51
SMC6-204ENST00000428868 TRBV10-3A0A0K0K1G6 114 aa5.62□□□□□ -1.51
SMC6-204ENST00000428868 A0A1B0GVY2 172 aa5.62□□□□□ -1.51
SMC6-204ENST00000428868 GAGE10A6NGK3 116 aa5.62□□□□□ -1.51
SMC6-204ENST00000428868 TRIAP1O43715 76 aa5.62□□□□□ -1.51
SMC6-204ENST00000428868 Q1RN00 199 aa5.62□□□□□ -1.51
SMC6-204ENST00000428868 C7orf33Q8WU49 177 aa5.62□□□□□ -1.51
SMC6-204ENST00000428868 APOBP04114 4563 aaKnown RBP5.62□□□□□ -1.51
SMC6-204ENST00000428868 IGLV5-37A0A075B6J1 123 aa5.61□□□□□ -1.51
SMC6-204ENST00000428868 TRAV13-2A0A0B4J235 113 aa5.61□□□□□ -1.51
SMC6-204ENST00000428868 SMIM11BQ8TCY0 68 aa5.61□□□□□ -1.51
SMC6-204ENST00000428868 SPACA4Q8TDM5 124 aa5.61□□□□□ -1.51
SMC6-204ENST00000428868 C22orf24Q9Y442 160 aa5.61□□□□□ -1.51
SMC6-204ENST00000428868 TRBV10-2A0A0K0K1G8 114 aa5.6□□□□□ -1.51
SMC6-204ENST00000428868 A0A1W2PPM0 123 aa5.6□□□□□ -1.51
SMC6-204ENST00000428868 M0R378 163 aa5.6□□□□□ -1.51
SMC6-204ENST00000428868 IGLV6-57P01721 117 aa5.6□□□□□ -1.51
SMC6-204ENST00000428868 KRTAP10-1P60331 282 aa5.6□□□□□ -1.51
SMC6-204ENST00000428868 PHF5AQ7RTV0 110 aaKnown RBP5.6□□□□□ -1.51
SMC6-204ENST00000428868 KRTAP11-1Q8IUC1 163 aa5.6□□□□□ -1.51
SMC6-204ENST00000428868 NKAPP1Q8N9T2 125 aa5.6□□□□□ -1.51
SMC6-204ENST00000428868 FAM30AQ9NZY2 134 aa5.6□□□□□ -1.51
SMC6-204ENST00000428868 RPL37AP8A6NKH3 93 aa5.59□□□□□ -1.51
SMC6-204ENST00000428868 M0QXV9 152 aa5.59□□□□□ -1.51
SMC6-204ENST00000428868 HAMPP81172 84 aa5.59□□□□□ -1.51
SMC6-204ENST00000428868 S100A7L2Q5SY68 101 aa5.59□□□□□ -1.51
SMC6-204ENST00000428868 LINC00167Q96N53 147 aa5.59□□□□□ -1.51
SMC6-204ENST00000428868 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
SMC6-204ENST00000428868 PSMB2P49721 201 aa5.58□□□□□ -1.52
SMC6-204ENST00000428868 LINC00336Q6ZUF6 198 aa5.58□□□□□ -1.52
SMC6-204ENST00000428868 CLEC2BQ92478 149 aa5.58□□□□□ -1.52
SMC6-204ENST00000428868 A0A087WYN8 130 aa5.57□□□□□ -1.52
SMC6-204ENST00000428868 TCL1BO95988 128 aa5.57□□□□□ -1.52
SMC6-204ENST00000428868 MRPL55Q7Z7F7 128 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms