RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 COX7BP24311 80 aa1.94□□□□□ -2.1
LINC00240-202ENST00000424968 URB1O60287 2271 aaKnown RBP1.94□□□□□ -2.1
LINC00240-202ENST00000424968 CICQ96RK0 1608 aaPredicted RBP1.94□□□□□ -2.1
LINC00240-202ENST00000424968 NREPQ16612 68 aa1.93□□□□□ -2.1
LINC00240-202ENST00000424968 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
LINC00240-202ENST00000424968 TIAM1Q13009 1591 aa1.93□□□□□ -2.1
LINC00240-202ENST00000424968 LMTK2Q8IWU2 1503 aa1.92□□□□□ -2.1
LINC00240-202ENST00000424968 IFI6P09912 130 aa1.92□□□□□ -2.1
LINC00240-202ENST00000424968 CRIPTQ9P021 101 aa1.92□□□□□ -2.1
LINC00240-202ENST00000424968 NHSQ6T4R5 1651 aa1.92□□□□□ -2.1
LINC00240-202ENST00000424968 POLR1AO95602 1720 aaPredicted RBP1.91□□□□□ -2.1
LINC00240-202ENST00000424968 ITSN1Q15811 1721 aa1.91□□□□□ -2.1
LINC00240-202ENST00000424968 TIAM2Q8IVF5 1701 aa1.91□□□□□ -2.1
LINC00240-202ENST00000424968 BCORQ6W2J9 1755 aa1.91□□□□□ -2.1
LINC00240-202ENST00000424968 SMIM5Q71RC9 77 aa1.91□□□□□ -2.1
LINC00240-202ENST00000424968 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.11
LINC00240-202ENST00000424968 PRO0255Q9UI72 69 aa1.9□□□□□ -2.11
LINC00240-202ENST00000424968 ABCA9Q8IUA7 1624 aa1.9□□□□□ -2.11
LINC00240-202ENST00000424968 MADDQ8WXG6 1647 aa1.9□□□□□ -2.11
LINC00240-202ENST00000424968 EIF2AK4Q9P2K8 1649 aaKnown RBP1.9□□□□□ -2.11
LINC00240-202ENST00000424968 CDC42BPGQ6DT37 1551 aa1.89□□□□□ -2.11
LINC00240-202ENST00000424968 USP32Q8NFA0 1604 aa1.89□□□□□ -2.11
LINC00240-202ENST00000424968 A0A0D9SG42 100 aa1.89□□□□□ -2.11
LINC00240-202ENST00000424968 DEFB123Q8N688 67 aa1.89□□□□□ -2.11
LINC00240-202ENST00000424968 LCE6AA0A183 80 aa1.88□□□□□ -2.11
LINC00240-202ENST00000424968 I3L3M4 83 aa1.88□□□□□ -2.11
LINC00240-202ENST00000424968 KRTAP10-4P60372 401 aaPredicted RBP1.88□□□□□ -2.11
LINC00240-202ENST00000424968 Q8IZM0 81 aa1.88□□□□□ -2.11
LINC00240-202ENST00000424968 HILPDAQ9Y5L2 63 aa1.88□□□□□ -2.11
LINC00240-202ENST00000424968 ASH1LQ9NR48 2969 aaKnown RBP1.88□□□□□ -2.11
LINC00240-202ENST00000424968 LAMC1P11047 1609 aa1.88□□□□□ -2.11
LINC00240-202ENST00000424968 I3L2K1 104 aa1.87□□□□□ -2.11
LINC00240-202ENST00000424968 SLIT1O75093 1534 aa1.86□□□□□ -2.11
LINC00240-202ENST00000424968 RALGAPBQ86X10 1494 aa1.86□□□□□ -2.11
LINC00240-202ENST00000424968 WIZO95785 1651 aa1.86□□□□□ -2.11
LINC00240-202ENST00000424968 DOPEY2Q9Y3R5 2298 aa1.86□□□□□ -2.11
LINC00240-202ENST00000424968 OTOGLQ3ZCN5 2332 aa1.85□□□□□ -2.11
LINC00240-202ENST00000424968 CPSF4LA6NMK7 179 aaKnown RBP1.84□□□□□ -2.11
LINC00240-202ENST00000424968 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
LINC00240-202ENST00000424968 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
LINC00240-202ENST00000424968 PARP4Q9UKK3 1724 aaKnown RBP1.83□□□□□ -2.12
LINC00240-202ENST00000424968 FXYD6-FXYD2A0A087WZ82 144 aa1.83□□□□□ -2.12
LINC00240-202ENST00000424968 CCL22O00626 93 aa1.83□□□□□ -2.12
LINC00240-202ENST00000424968 SFTA3P0C7M3 94 aa1.83□□□□□ -2.12
LINC00240-202ENST00000424968 FAM103A1Q9BTL3 118 aaKnown RBP1.83□□□□□ -2.12
LINC00240-202ENST00000424968 HELZ2Q9BYK8 2649 aaKnown RBP1.83□□□□□ -2.12
LINC00240-202ENST00000424968 MUC6Q6W4X9 2439 aa1.82□□□□□ -2.12
LINC00240-202ENST00000424968 C3orf79P0CE67 100 aa1.82□□□□□ -2.12
LINC00240-202ENST00000424968 ZNF831Q5JPB2 1677 aa1.82□□□□□ -2.12
LINC00240-202ENST00000424968 PLCE1Q9P212 2302 aa1.82□□□□□ -2.12
LINC00240-202ENST00000424968 NDUFA4O00483 81 aa1.81□□□□□ -2.12
LINC00240-202ENST00000424968 UBL5Q9BZL1 73 aa1.81□□□□□ -2.12
LINC00240-202ENST00000424968 NWD1Q149M9 1564 aa1.81□□□□□ -2.12
LINC00240-202ENST00000424968 CACNA1EQ15878 2313 aa1.8□□□□□ -2.12
LINC00240-202ENST00000424968 DOT1LQ8TEK3 1739 aa1.8□□□□□ -2.12
LINC00240-202ENST00000424968 K7EQZ3 153 aa1.8□□□□□ -2.12
LINC00240-202ENST00000424968 COX6B1P14854 86 aa1.8□□□□□ -2.12
LINC00240-202ENST00000424968 EEA1Q15075 1411 aa1.8□□□□□ -2.12
LINC00240-202ENST00000424968 COX6B2Q6YFQ2 88 aa1.79□□□□□ -2.12
LINC00240-202ENST00000424968 PREX1Q8TCU6 1659 aa1.79□□□□□ -2.12
LINC00240-202ENST00000424968 THOC2Q8NI27 1593 aaKnown RBP1.78□□□□□ -2.12
LINC00240-202ENST00000424968 MRPL33O75394 65 aaKnown RBP1.78□□□□□ -2.12
LINC00240-202ENST00000424968 RICTORQ6R327 1708 aa1.77□□□□□ -2.13
LINC00240-202ENST00000424968 DIP2AQ14689 1571 aa1.77□□□□□ -2.13
LINC00240-202ENST00000424968 Q5VSD8 79 aa1.77□□□□□ -2.13
LINC00240-202ENST00000424968 BIVM-ERCC5R4GMW8 1640 aa1.77□□□□□ -2.13
LINC00240-202ENST00000424968 ABCA10Q8WWZ4 1543 aa1.76□□□□□ -2.13
LINC00240-202ENST00000424968 TSC2P49815 1807 aa1.75□□□□□ -2.13
LINC00240-202ENST00000424968 PREX2Q70Z35 1606 aa1.75□□□□□ -2.13
LINC00240-202ENST00000424968 PLXNC1O60486 1568 aa1.74□□□□□ -2.13
LINC00240-202ENST00000424968 MRPL34Q9BQ48 92 aaKnown RBP1.74□□□□□ -2.13
LINC00240-202ENST00000424968 CACNA1HO95180 2353 aa1.74□□□□□ -2.13
LINC00240-202ENST00000424968 ZNF462Q96JM2 2506 aa1.74□□□□□ -2.13
LINC00240-202ENST00000424968 SPTBN2O15020 2390 aa1.73□□□□□ -2.13
LINC00240-202ENST00000424968 NESP48681 1621 aa1.73□□□□□ -2.13
LINC00240-202ENST00000424968 TNCP24821 2201 aa1.73□□□□□ -2.13
LINC00240-202ENST00000424968 ENHOQ6UWT2 76 aa1.73□□□□□ -2.13
LINC00240-202ENST00000424968 C2CD3Q4AC94 2353 aa1.73□□□□□ -2.13
LINC00240-202ENST00000424968 DDX60LQ5H9U9 1706 aaKnown RBP1.72□□□□□ -2.13
LINC00240-202ENST00000424968 NRAPQ86VF7 1730 aa1.72□□□□□ -2.13
LINC00240-202ENST00000424968 FMN2Q9NZ56 1722 aa1.72□□□□□ -2.13
LINC00240-202ENST00000424968 PTPRZ1P23471 2315 aaPredicted RBP1.72□□□□□ -2.13
LINC00240-202ENST00000424968 TRIOBPQ9H2D6 2365 aa1.71□□□□□ -2.14
LINC00240-202ENST00000424968 ABCA6Q8N139 1617 aa1.7□□□□□ -2.14
LINC00240-202ENST00000424968 CNOT1A5YKK6 2376 aaKnown RBP1.7□□□□□ -2.14
LINC00240-202ENST00000424968 PTPRQQ9UMZ3 2332 aa1.7□□□□□ -2.14
LINC00240-202ENST00000424968 MAST1Q9Y2H9 1570 aa1.7□□□□□ -2.14
LINC00240-202ENST00000424968 LINC01549A6NIU2 74 aa1.69□□□□□ -2.14
LINC00240-202ENST00000424968 DEFB114Q30KQ6 69 aa1.69□□□□□ -2.14
LINC00240-202ENST00000424968 KCNQ1DNQ9H478 68 aa1.69□□□□□ -2.14
LINC00240-202ENST00000424968 TNRC6CQ9HCJ0 1690 aaKnown RBP1.69□□□□□ -2.14
LINC00240-202ENST00000424968 ALS2Q96Q42 1657 aa1.68□□□□□ -2.14
LINC00240-202ENST00000424968 PIEZO2Q9H5I5 2752 aa1.68□□□□□ -2.14
LINC00240-202ENST00000424968 SERF2P84101 59 aa1.68□□□□□ -2.14
LINC00240-202ENST00000424968 USF3Q68DE3 2245 aa1.67□□□□□ -2.14
LINC00240-202ENST00000424968 PRXQ9BXM0 1461 aa1.67□□□□□ -2.14
LINC00240-202ENST00000424968 ABCC6O95255 1503 aa1.66□□□□□ -2.14
LINC00240-202ENST00000424968 DEFB131BA0A096LNP1 70 aa1.66□□□□□ -2.14
LINC00240-202ENST00000424968 CDKN2A-AS1Q9UH64 79 aa1.66□□□□□ -2.14
LINC00240-202ENST00000424968 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms